BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0022.p (1077 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1521 [EF] COG0458 Carbamoylphosphate synthase large subunit (... 1806 0.0 PM1505 [EF] COG0458 Carbamoylphosphate synthase large subunit (s... 1617 0.0 NMB1855 [EF] COG0458 Carbamoylphosphate synthase large subunit (... 1617 0.0 NMA0602 [EF] COG0458 Carbamoylphosphate synthase large subunit (... 1617 0.0 PA4756 [EF] COG0458 Carbamoylphosphate synthase large subunit (s... 1579 0.0 VC2389 [EF] COG0458 Carbamoylphosphate synthase large subunit (s... 1509 0.0 carB [EF] COG0458 Carbamoylphosphate synthase large subunit (spl... 1503 0.0 STM0067 [EF] COG0458 Carbamoylphosphate synthase large subunit (... 1503 0.0 YPO0482 [EF] COG0458 Carbamoylphosphate synthase large subunit (... 1502 0.0 ZcarB [EF] COG0458 Carbamoylphosphate synthase large subunit (sp... 1501 0.0 >RSc1521 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Rso Ralstonia solanacearum Length = 1081 Score = 1806 bits (4679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 880/1086 (81%), Positives = 979/1086 (90%), Gaps = 15/1086 (1%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTDIK+ILIIGAGPIIIGQACEFDYSGAQACKALREEGFKV+LVNSNPATIMTDP Sbjct: 1 MPKRTDIKTILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVVLVNSNPATIMTDPST 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 AD TYIEPITW+ VERIIAKE+PDAILPTMGGQTALNCALDLHRHGVLEKY VELIGA+P Sbjct: 61 ADVTYIEPITWEVVERIIAKERPDAILPTMGGQTALNCALDLHRHGVLEKYNVELIGASP 120 Query: 121 EAIDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTI-------GFPVIIRPSFT 173 EAIDKAEDR KFK+AMTKIGLGSA+SG++H++EE+ AVQ I G+P++IRPSFT Sbjct: 121 EAIDKAEDRQKFKEAMTKIGLGSAKSGIAHSLEEALAVQAQIARETSSGGYPIVIRPSFT 180 Query: 174 MGGTGGGIAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCS 233 +GGTGGGIAYN EEFE ICKRGL+ SPT+ELLIEESL+GWKEYEMEVVRDK DNCIIVCS Sbjct: 181 LGGTGGGIAYNREEFEDICKRGLDLSPTNELLIEESLLGWKEYEMEVVRDKKDNCIIVCS 240 Query: 234 IENLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADG 293 IENLDPMG+HTGDSITVAPAQTLTDKEYQI+RNASLAVLREIGVDTGGSNVQFS+NP DG Sbjct: 241 IENLDPMGIHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPEDG 300 Query: 294 RMIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSID 353 RMIVIEMNPRVSRSSALASKATGFPIAK+AAKLAVG+TLDEL+NEITGGATPASFEPSID Sbjct: 301 RMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGATPASFEPSID 360 Query: 354 YVVTKIPRFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKT 413 YVVTK+PRF FEKFPQAD HLTTQMKSVGEVMA+GRTFQESFQKALRGLEVGVDG++EK+ Sbjct: 361 YVVTKVPRFAFEKFPQADSHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLDEKS 420 Query: 414 TDRELIEKELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEK 473 +DR+ I E+GEPGPDRIWY+GDAF G S++EV+ T +DPWFL+QI++IV E L K Sbjct: 421 SDRDEIIAEIGEPGPDRIWYLGDAFRLGLSIDEVYAETAVDPWFLAQIEDIVRTEA-LVK 479 Query: 474 DVALESLDKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLNVRPVFKRVDTCAGEFS 533 L+SL A L LKQKGFSDRRLA L+KTT AVRE+R VRPV+KRVDTCA EF+ Sbjct: 480 ARTLDSLSAAELRLLKQKGFSDRRLATLMKTTAQAVREKRIAEKVRPVYKRVDTCAAEFA 539 Query: 534 TDTAYMYSTYDE---ECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYE 590 T+TAY+YSTY+ ECE++PT++KKIMVLGGGPNRIGQGIEFDYCCVHAALA+R+DGYE Sbjct: 540 TNTAYLYSTYEAEHGECEADPTERKKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYE 599 Query: 591 TIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLE 650 TIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLE Sbjct: 600 TIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLE 659 Query: 651 ANGVPIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVR 710 ANGVPI+GT+PDMIDAAEDRERFQKLL DLGLRQPPNRTAR E +AL+LA EIGYPLVVR Sbjct: 660 ANGVPIIGTTPDMIDAAEDRERFQKLLHDLGLRQPPNRTARAEDEALKLADEIGYPLVVR 719 Query: 711 PSYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFI 770 PSYVLGGRAMEIVHE RDLERYMREAVKVS+DSPVLLDRFLNDAIE DVDCLSDG+R FI Sbjct: 720 PSYVLGGRAMEIVHEPRDLERYMREAVKVSNDSPVLLDRFLNDAIECDVDCLSDGKRVFI 779 Query: 771 GGVMEHIEQAGVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQS 830 GGVMEHIEQAGVHSGDSACSLPPYSLS+ T++ELKRQTA MA+ LNV+GLMNVQFAIQQ Sbjct: 780 GGVMEHIEQAGVHSGDSACSLPPYSLSQATVDELKRQTAAMARALNVIGLMNVQFAIQQK 839 Query: 831 EVDGKTVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPY 890 + D V+VLEVNPRASRTVP+VSKATG+ LAK+AARCM GQSLD QGI +EVVP Y Sbjct: 840 GGE----DIVYVLEVNPRASRTVPYVSKATGISLAKVAARCMAGQSLDEQGIHDEVVPSY 895 Query: 891 YSVKEAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFL 950 YSVKEAVFPF KFPGVD +LGPEM+STGEVMGVG+TFGEA KSQ+ AG +LP+ G V + Sbjct: 896 YSVKEAVFPFNKFPGVDPVLGPEMRSTGEVMGVGRTFGEALFKSQLAAGSRLPEKGTVLM 955 Query: 951 SVKNSDKPRAVQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKN 1010 +VK+SDKPRA++VAR L LG+ IVAT+GTA+AI AAGIPV VNKV +GRPHIVDM+KN Sbjct: 956 TVKDSDKPRAIEVARTLHTLGYPIVATRGTASAIEAAGIPVRVVNKVKDGRPHIVDMIKN 1015 Query: 1011 NEIALVVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLESLDVYDLQ 1070 E+ALV TV+E R AIADS +IRT+ALA RVT +TTIAGA AAVEG++HL++LDVYDLQ Sbjct: 1016 GELALVFTTVDETRAAIADSRSIRTAALANRVTYYTTIAGARAAVEGLKHLQNLDVYDLQ 1075 Query: 1071 GLHKAI 1076 GLH ++ Sbjct: 1076 GLHASL 1081 >PM1505 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Pmu Pasteurella multocida Length = 1068 Score = 1617 bits (4188), Expect = 0.0, Method: Compositional matrix adjust. Identities = 772/1076 (71%), Positives = 907/1076 (84%), Gaps = 9/1076 (0%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTDI +ILIIGAGPI+IGQACEFDYSGAQACKALREEG+KV+LVNSNPATIMTDP+M Sbjct: 1 MPKRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPDM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 AD TYIEPI W+ VE+II KE+PDAILPTMGGQTALNCALDL ++GVL+KY VELIGA Sbjct: 61 ADVTYIEPIEWRTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYNVELIGAKE 120 Query: 121 EAIDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 +AIDKAEDR +FK+AM KIGL + +S V HT+EE+WA Q +GFP +IRPSFTMGG+GGG Sbjct: 121 DAIDKAEDRGRFKEAMEKIGLSTPKSFVCHTLEEAWAAQSEVGFPTLIRPSFTMGGSGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN +EF IC+RG +ASPT ELLIE+S++GWKEYEMEVVRDKADNCIIVCSIEN DPM Sbjct: 181 IAYNKDEFYAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 GVHTGDSITVAPAQTLTDKEYQIMRNAS+AVLREIGVDTGGSNVQF++NP +G MIVIEM Sbjct: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFAINPENGEMIVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAK+AAKLAVG+TL+ELRN+ITGG PASFEPSIDYVVTK+P Sbjct: 301 NPRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTTDRELIE 420 RF FEKFPQAD LTTQMKSVGEVMA+GRTFQES QKALRGLE G+ G N + + E I Sbjct: 361 RFAFEKFPQADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNLMSEEPEKIR 420 Query: 421 KELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKDVALESL 480 +ELG PGP RI YV DAF GF+L+EVH + IDPWFL QI+++V EL LEK L+ L Sbjct: 421 QELGNPGPIRILYVADAFGAGFTLDEVHHYSKIDPWFLIQIQDLVLEELALEKRT-LDDL 479 Query: 481 DKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLNVRPVFKRVDTCAGEFSTDTAYMY 540 D A L +LK+KGFSD+R+A+L K+ ++AVR +R LN+ PV+KRVDTCAGEF++DTAY+Y Sbjct: 480 DYAELRRLKRKGFSDKRIAQLTKSAESAVRNKRVSLNLHPVYKRVDTCAGEFTSDTAYLY 539 Query: 541 STYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNCNPET 600 STY+EECES P+DKKKIM+LGGGPNRIGQGIEFDYCCVHA+LA+R+ G+ETIMVNCNPET Sbjct: 540 STYEEECESRPSDKKKIMILGGGPNRIGQGIEFDYCCVHASLALREAGFETIMVNCNPET 599 Query: 601 VSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGVPIVGTS 660 VSTD+DTSDRLYFEP+TLEDVLEI+ EKP GVIV YGGQTPLKLA DL ANGV I+GTS Sbjct: 600 VSTDFDTSDRLYFEPLTLEDVLEIIHVEKPHGVIVHYGGQTPLKLANDLHANGVNIIGTS 659 Query: 661 PDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYVLGGRAM 720 D IDAAEDRERFQ++L L L+QP NRTAR +A++LA+E+GYPLVVRPSYVLGGRAM Sbjct: 660 ADSIDAAEDRERFQQILHKLHLKQPTNRTARNAEEAVKLAEEVGYPLVVRPSYVLGGRAM 719 Query: 721 EIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVMEHIEQA 780 +IV+ +L+RYMREAV VS+DSP+LLD FLN+AIEVDVDC+ DG IGG+M+HIEQA Sbjct: 720 QIVYNVDELQRYMREAVSVSNDSPILLDHFLNNAIEVDVDCICDGAEVVIGGIMQHIEQA 779 Query: 781 GVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDGKTVDTV 840 G+HSGDSACSLPPYSLS++ +E++RQTA MA L V GLMNVQFA+Q DG + Sbjct: 780 GIHSGDSACSLPPYSLSQEVQDEIRRQTAEMAFALGVKGLMNVQFAVQ----DG----VI 831 Query: 841 FVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVKEAVFPF 900 +VLEVNPRASRTVPFVSKATG LAKIAAR M G+SL +QGI+ EV+PP+YSVKEAVFPF Sbjct: 832 YVLEVNPRASRTVPFVSKATGRPLAKIAARVMAGESLKAQGIQGEVIPPFYSVKEAVFPF 891 Query: 901 VKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKNSDKPRA 960 +KFPGVDT+LGPEM+STGEVMGVG TF EAF+K+Q+GA ++PK+GKVFLSV ++DKPR Sbjct: 892 IKFPGVDTVLGPEMRSTGEVMGVGTTFAEAFLKAQLGANERIPKTGKVFLSVNDADKPRL 951 Query: 961 VQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIALVVNTV 1020 + +AR L G+ + AT GTA + G+ V +NKV EGRP+IVD +KN EIA+V+NTV Sbjct: 952 LPIARQLQESGYGLCATLGTAKFLREHGVAVQIINKVREGRPNIVDAIKNGEIAMVINTV 1011 Query: 1021 EEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLESLDVYDLQGLHKAI 1076 + D AIR SAL +V TT+AGAEA + +L +VY LQ LH+ + Sbjct: 1012 SGLAETVTDGHAIRRSALQQKVFLQTTLAGAEALAGSVEYLADSEVYSLQDLHQRL 1067 >NMB1855 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Nme Neisseria meningitidis MC58 Length = 1071 Score = 1617 bits (4187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 776/1073 (72%), Positives = 898/1073 (83%), Gaps = 9/1073 (0%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTD+KSILIIGAGPI+IGQACEFDYSGAQACKALREEG+KVILVNSNPATIMTDPEM Sbjct: 1 MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 AD TYIEPI WQ VE+IIAKE+PDAILPTMGGQTALNCALDL R+GVL KY VELIGAT Sbjct: 61 ADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATE 120 Query: 121 EAIDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 +AIDKAEDR +FK+AM KIGL +S V HTM E+ A Q+ +GFP +IRPSFTMGG+GGG Sbjct: 121 DAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLIRPSFTMGGSGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN +EF IC+RG +ASPT ELLIE+S++GWKEYEMEVVRDK DNCII+CSIEN DPM Sbjct: 181 IAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQF+VNPA+G MIVIEM Sbjct: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPANGEMIVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAK+AAKLAVGFTLDELRN+ITGG TPASFEPSIDYVVTKIP Sbjct: 301 NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGKTPASFEPSIDYVVTKIP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTTDRELIE 420 RF FEKFP AD LTTQMKSVGEVMA+GRT QESFQKALRGLE G+ G N ++ D+ I Sbjct: 361 RFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRSEDKAEIR 420 Query: 421 KELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKDVALESL 480 +EL PGP+R+ +V DAF GF+LEE+H + IDPWFL+QI++++ E + D L L Sbjct: 421 RELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAV-SDGILSDL 479 Query: 481 DKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLNVRPVFKRVDTCAGEFSTDTAYMY 540 D A L +LK+KGFSD+RLA+LL ++ VRE R L + PV+KRVDTCA EF+T+TAY+Y Sbjct: 480 DFAALRRLKRKGFSDKRLAQLLNVSEKEVREHRYALKLHPVYKRVDTCAAEFATETAYLY 539 Query: 541 STYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNCNPET 600 STY+EECES P+D+KK+M+LGGGPNRIGQGIEFDYCCVHAALA+R+ G+ETIMVNCNPET Sbjct: 540 STYEEECESRPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCNPET 599 Query: 601 VSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGVPIVGTS 660 VSTD+DTSDRLYFEP+TLEDVLEIV E P GVIV YGGQTPLKLA L NGV I+GTS Sbjct: 600 VSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLANALVENGVNIIGTS 659 Query: 661 PDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYVLGGRAM 720 D IDAAEDRERFQK+L DLGLRQPPNR A E +AL A+EIGYPLVVRPSYVLGGRAM Sbjct: 660 ADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAM 719 Query: 721 EIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVMEHIEQA 780 ++VH +L++YMREAV+VS DSPVLLD FLN+AIEVDVDC+SDG+ IGG+M+H+EQA Sbjct: 720 QVVHSAEELQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQA 779 Query: 781 GVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDGKTVDTV 840 G+HSGDS CSLPPYSLS++ +E++RQT MA L VVGLMNVQFA+Q DG V Sbjct: 780 GIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNVQFAVQ----DG----VV 831 Query: 841 FVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVKEAVFPF 900 FVLEVNPRASRTVPFVSKATG+ LAK+ ARCM G SL QG++ EVVP +Y+VKEAVFPF Sbjct: 832 FVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPF 891 Query: 901 VKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKNSDKPRA 960 +KFPGVDTILGPEM+STGEVMGVG +FGEA+ K+Q+GAG +L +GK+FLSV+ DK R Sbjct: 892 IKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERV 951 Query: 961 VQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIALVVNTV 1020 ++ A++ LG+ I AT+GTA ++ G+ V T+NKV EGRPHI D +KN EIALVVNTV Sbjct: 952 IKTAKNFQVLGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTV 1011 Query: 1021 EEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLESLDVYDLQGLH 1073 +++DS IR SAL RV +TT AG EA EG + + L VY +Q LH Sbjct: 1012 SSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELH 1064 >NMA0602 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) NmA Neisseria meningitidis Z2491 Length = 1071 Score = 1617 bits (4186), Expect = 0.0, Method: Compositional matrix adjust. Identities = 776/1073 (72%), Positives = 898/1073 (83%), Gaps = 9/1073 (0%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTD+KSILIIGAGPI+IGQACEFDYSGAQACKALREEG+KVILVNSNPATIMTDPEM Sbjct: 1 MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 AD TYIEPI WQ VE+IIAKE+PDAILPTMGGQTALNCALDL R+GVL KY VELIGAT Sbjct: 61 ADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATE 120 Query: 121 EAIDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 +AIDKAEDR +FK+AM KIGL +S V HTM E+ A Q+ +GFP +IRPSFTMGG+GGG Sbjct: 121 DAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQEQVGFPTLIRPSFTMGGSGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN +EF IC+RG +ASPT ELLIE+S++GWKEYEMEVVRDK DNCII+CSIEN DPM Sbjct: 181 IAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKNDNCIIICSIENFDPM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQF+VNP +G MIVIEM Sbjct: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAVNPENGEMIVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAK+AAKLAVGFTLDELRN+ITGG TPASFEPSIDYVVTKIP Sbjct: 301 NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNDITGGRTPASFEPSIDYVVTKIP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTTDRELIE 420 RF FEKFP AD LTTQMKSVGEVMA+GRT QESFQKALRGLE G+ G N +++D+ I Sbjct: 361 RFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESFQKALRGLETGLCGFNPRSSDKAEIR 420 Query: 421 KELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKDVALESL 480 +EL PGP+R+ +V DAF GF+LEE+H + IDPWFL+QI++++ E + D L L Sbjct: 421 RELANPGPERMLFVADAFRAGFTLEEIHEICAIDPWFLAQIEDLMKEEKAV-SDGVLSDL 479 Query: 481 DKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLNVRPVFKRVDTCAGEFSTDTAYMY 540 D A L +LK+KGFSD+R+A+LL + VRE R LN+ PV+KRVDTCA EF+T+TAY+Y Sbjct: 480 DYAALRRLKRKGFSDKRIAQLLDVKEKEVREHRYVLNLHPVYKRVDTCAAEFATETAYLY 539 Query: 541 STYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVNCNPET 600 STY+EECE+ P+D+KK+M+LGGGPNRIGQGIEFDYCCVHAALA+R+ G+ETIMVNCNPET Sbjct: 540 STYEEECEARPSDRKKVMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCNPET 599 Query: 601 VSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGVPIVGTS 660 VSTD+DTSDRLYFEP+TLEDVLEIV E P GVIV YGGQTPLKLA L NGV I+GTS Sbjct: 600 VSTDFDTSDRLYFEPLTLEDVLEIVRTENPWGVIVHYGGQTPLKLANALVENGVNIIGTS 659 Query: 661 PDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYVLGGRAM 720 D IDAAEDRERFQK+L DLGLRQPPNR A E +AL A+EIGYPLVVRPSYVLGGRAM Sbjct: 660 ADSIDAAEDRERFQKVLNDLGLRQPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAM 719 Query: 721 EIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVMEHIEQA 780 +IVH L++YMREAV+VS DSPVLLD FLN+AIEVDVDC+SDG+ IGG+M+H+EQA Sbjct: 720 QIVHSAEQLQKYMREAVQVSEDSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQA 779 Query: 781 GVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDGKTVDTV 840 G+HSGDS CSLPPYSLS++ +E++RQT MA L VVGLMNVQFA+Q DG V Sbjct: 780 GIHSGDSGCSLPPYSLSEEIQDEIRRQTKAMAYALGVVGLMNVQFAVQ----DG----VV 831 Query: 841 FVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVKEAVFPF 900 FVLEVNPRASRTVPFVSKATG+ LAK+ ARCM G SL QG++ EVVP +Y+VKEAVFPF Sbjct: 832 FVLEVNPRASRTVPFVSKATGVPLAKVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPF 891 Query: 901 VKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKNSDKPRA 960 +KFPGVDTILGPEM+STGEVMGVG +FGEA+ K+Q+GAG +L +GK+FLSV+ DK R Sbjct: 892 IKFPGVDTILGPEMRSTGEVMGVGASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERV 951 Query: 961 VQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIALVVNTV 1020 ++ A++ ALG+ I AT+GTA ++ G+ V T+NKV EGRPHI D +KN EIALVVNTV Sbjct: 952 IKTAKNFQALGYGICATRGTAQYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTV 1011 Query: 1021 EEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLESLDVYDLQGLH 1073 +++DS IR SAL RV +TT AG EA EG + + L VY +Q LH Sbjct: 1012 SSDPQSVSDSHIIRQSALQQRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELH 1064 >PA4756 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Pae Pseudomonas aeruginosa Length = 1073 Score = 1579 bits (4088), Expect = 0.0, Method: Compositional matrix adjust. Identities = 769/1081 (71%), Positives = 886/1081 (81%), Gaps = 15/1081 (1%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTDIKSILI+GAGPI+IGQACEFDYSGAQACKALREEG++VILVNSNPATIMTDP M Sbjct: 1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 ADATYIEPI W V +II KE+PDA+LPTMGGQTALNCALDL RHGVLEK+ VE+IGA Sbjct: 61 ADATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLERHGVLEKFGVEMIGANA 120 Query: 121 EAIDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 + IDKAEDRS+F +AM IGL RSG++H+MEE++ V + +GFP IIRPSFTMGGTGGG Sbjct: 121 DTIDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEQVGFPCIIRPSFTMGGTGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN EEFE IC RGL+ SPT+ELLI+ESLIGWKEYEMEVVRDK DNCIIVCSIEN DPM Sbjct: 181 IAYNREEFEEICARGLDLSPTNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGV+TGGSNVQF + P GRM+VIEM Sbjct: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAKIAAKLAVG+TLDEL+N+ITGG TPASFEP+IDYVVTKIP Sbjct: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEK--TTDRE- 417 RF FEKFP+AD LTTQMKSVGEVMAIGRTFQES QKALRGLEVG G + K D E Sbjct: 361 RFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALRGLEVGATGFDPKLDLNDPEA 420 Query: 418 --LIEKELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKDV 475 ++++EL P +R+WYV DAF G S+EEV LT ID WFL QI+++V E + K + Sbjct: 421 DSILKRELTVPSAERVWYVADAFRAGKSVEEVFELTRIDEWFLVQIEDLVKDEEKV-KTL 479 Query: 476 ALESLDKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLNVRPVFKRVDTCAGEFSTD 535 L S+D+ +++LK+KGFSD RLAKLL T+ +R R KL V PV+KRVDTCA EF+TD Sbjct: 480 GLSSIDRELMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATD 539 Query: 536 TAYMYSTYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMVN 595 TAYMYSTY+EECE+NP+ ++KIM+LGGGPNRIGQGIEFDYCCVHAALAMR+DGYETIMVN Sbjct: 540 TAYMYSTYEEECEANPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVN 599 Query: 596 CNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGVP 655 CNPETVSTDYDTSDRLYFEPVTLEDVLEIV E+P GVIVQYGGQTPLKL LE GVP Sbjct: 600 CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLCRALEEAGVP 659 Query: 656 IVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYVL 715 I+GTSPD ID AEDRERFQ+++Q L LRQP N TAR+E +AL ++ IGYPLVVRPSYVL Sbjct: 660 IIGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDEALAASKAIGYPLVVRPSYVL 719 Query: 716 GGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVME 775 GGRAMEIV+++ +L+RYMREAV+VS+DSPVLLD FLN AIEVD+D + DGE IG +M+ Sbjct: 720 GGRAMEIVYQEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDIDAVCDGEIVVIGAIMQ 779 Query: 776 HIEQAGVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDGK 835 HIEQAGVHSGDSACSLPPYSL + +E++ Q MA L VVGLMNVQ A+Q + Sbjct: 780 HIEQAGVHSGDSACSLPPYSLPQHIQDEIREQVKKMALELGVVGLMNVQMAVQGED---- 835 Query: 836 TVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVKE 895 +FV+EVNPRASRTVPFVSK G LAK+AAR M G++L G E++PP++SVKE Sbjct: 836 ----IFVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGFTQEIIPPFFSVKE 891 Query: 896 AVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKNS 955 AVFPF KFPGVD ILGPEMKSTGEVMGVG +F EAF K+Q+GA LP +G F+SV+ Sbjct: 892 AVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTAGCAFISVRED 951 Query: 956 DKPRAVQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIAL 1015 DKP A QVA DLVALGF +VAT GTA I AAG+PV VNKV EGRPH+VDM+KN+E+ L Sbjct: 952 DKPFAAQVAGDLVALGFEVVATAGTARVIEAAGLPVRRVNKVTEGRPHVVDMIKNDEVTL 1011 Query: 1016 VVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLESLDVYDLQGLHKA 1075 ++NT E R +IADS +IR +AL ++ TTIAG +A E ++ V LQ LH Sbjct: 1012 IINTT-EGRQSIADSYSIRRNALQHKICCTTTIAGGQAICEALKFGPEKTVRRLQDLHAG 1070 Query: 1076 I 1076 I Sbjct: 1071 I 1071 >VC2389 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Vch Vibrio cholerae Length = 1076 Score = 1509 bits (3908), Expect = 0.0, Method: Compositional matrix adjust. Identities = 738/1082 (68%), Positives = 862/1082 (79%), Gaps = 17/1082 (1%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTDI+SILI+GAGPI+IGQACEFDYSGAQACKALREEG++VILVNSNPATIMTDPEM Sbjct: 1 MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 ADATYIEPI W+ V +II KE+PDAILPTMGGQTALNCAL L +HGVL ++ VE+IGAT Sbjct: 61 ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLAEFGVEMIGATA 120 Query: 121 EAIDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 +AIDKAEDRS+F +AM IGL R+ + +MEE++ V +GFP IIRPSFTMGG+GGG Sbjct: 121 DAIDKAEDRSRFDKAMKSIGLECPRADTAKSMEEAYKVLDMVGFPCIIRPSFTMGGSGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN EEFE IC RGL+ SPT+ELLI+ESLIGWKEYEMEVVRDK DNCIIVC+IEN DPM Sbjct: 181 IAYNREEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 G+HTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGV+TGGSNVQF +NP DGRM++IEM Sbjct: 241 GIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAK+AAKLAVGFTLDEL N+ITGGATPASFEP+IDYVVTKIP Sbjct: 301 NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGATPASFEPTIDYVVTKIP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTTDREL-- 418 RF FEKF A+ LTTQMKSVGEVMAIGR QES QKALRGLEVG G++EK D + Sbjct: 361 RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGAAGLDEK-VDLDAPD 419 Query: 419 ----IEKELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKD 474 I EL E G +RIWY+ DAF G S++ V LT+ID WFL QI+E+V +E + K Sbjct: 420 ALTKIRYELKEAGAERIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVKLEAEV-KA 478 Query: 475 VALESLDKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLNVRPVFKRVDTCAGEFST 534 L++ L ++K+KGFSD RL+KLL ++ +R R + N+ PV+KRVDTCA EF + Sbjct: 479 GGFAGLNQDVLRKMKRKGFSDARLSKLLGVSENEIRRLRDQYNIHPVYKRVDTCAAEFKS 538 Query: 535 DTAYMYSTYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMV 594 DTAYMYSTYDEECE+NPTDK KIMVLGGGPNRIGQGIEFDYCCVHAALA+R+DGYETIMV Sbjct: 539 DTAYMYSTYDEECEANPTDKDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMV 598 Query: 595 NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGV 654 NCNPETVSTDYDTSDRLYFEPVTLEDVL IV EKP GVIVQYGGQTPLKLA LEA GV Sbjct: 599 NCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRVEKPKGVIVQYGGQTPLKLARALEAAGV 658 Query: 655 PIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYV 714 P++GTSPD ID AEDRERFQ+ +Q LGL+QP N T A++ ++EIG+PLVVRPSYV Sbjct: 659 PVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREIGFPLVVRPSYV 718 Query: 715 LGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVM 774 LGGRAMEIV++++DL RY EAV VS++SPVLLDRFL+DA EVDVD + DGER IGG+M Sbjct: 719 LGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAICDGERVVIGGIM 778 Query: 775 EHIEQAGVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDG 834 EHIEQAGVHSGDSACSLP Y+LS++ ++++ Q +A L V GLMN+QFA++ +E Sbjct: 779 EHIEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNIQFAVKDNE--- 835 Query: 835 KTVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVK 894 V+++EVNPRA+RTVPFVSKATG LAKIAAR MVGQ+L+ QG E++PPYYSVK Sbjct: 836 -----VYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVGQTLEQQGFTKEIIPPYYSVK 890 Query: 895 EAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKN 954 E V PF KFPGVD +LGPEM+STGEVMGVG TF EA+ K+++G G P+ G+ LSV+ Sbjct: 891 EVVLPFNKFPGVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGSVYPEGGRALLSVRE 950 Query: 955 SDKPRAVQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIA 1014 DK R V +A LV LG+ + AT GTA + AGI VNKV EGRPHI+D +KN+E Sbjct: 951 GDKQRVVDLASKLVKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNHEYT 1010 Query: 1015 LVVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLESLDVYDLQGLHK 1074 +VNT R AI DS +R ALA +V TT+ A A V +Q LH Sbjct: 1011 YIVNTA-SGRQAIEDSKVLRRGALAHKVNYTTTLNAAFATCMSHTADAKASVTSVQELHA 1069 Query: 1075 AI 1076 + Sbjct: 1070 RV 1071 >carB [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Eco Escherichia coli K12 Length = 1073 Score = 1503 bits (3890), Expect = 0.0, Method: Compositional matrix adjust. Identities = 740/1082 (68%), Positives = 865/1082 (79%), Gaps = 16/1082 (1%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTDIKSILI+GAGPI+IGQACEFDYSGAQACKALREEG++VILVNSNPATIMTDPEM Sbjct: 1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 ADATYIEPI W+ V +II KE+PDA+LPTMGGQTALNCAL+L R GVLE++ V +IGAT Sbjct: 61 ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA 120 Query: 121 EAIDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 +AIDKAEDR +F AM KIGL +ARSG++HTMEE+ AV +GFP IIRPSFTMGG+GGG Sbjct: 121 DAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN EEFE IC RGL+ SPT ELLI+ESLIGWKEYEMEVVRDK DNCIIVCSIEN D M Sbjct: 181 IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 G+HTGDSITVAPAQTLTDKEYQIMRNAS+AVLREIGV+TGGSNVQF+VNP +GR+IVIEM Sbjct: 241 GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAK+AAKLAVG+TLDEL N+ITGG TPASFEPSIDYVVTKIP Sbjct: 301 NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTT--DREL 418 RF FEKF A+ LTTQMKSVGEVMAIGRT QES QKALRGLEVG G + K + D E Sbjct: 361 RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA 420 Query: 419 ---IEKELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKDV 475 I +EL + G DRIWY+ DAF G S++ V LT+ID WFL QI+E+V +E + +V Sbjct: 421 LTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKV-AEV 479 Query: 476 ALESLDKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLNVRPVFKRVDTCAGEFSTD 535 + L+ L QLK+KGF+D RLAKL + +R+ R + ++ PV+KRVDTCA EF+TD Sbjct: 480 GITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATD 539 Query: 536 TAYMYSTYDEECESNP-TDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMV 594 TAYMYSTY+EECE+NP TD++KIMVLGGGPNRIGQGIEFDYCCVHA+LA+R+DGYETIMV Sbjct: 540 TAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMV 599 Query: 595 NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGV 654 NCNPETVSTDYDTSDRLYFEPVTLEDVLEIV EKP GVIVQYGGQTPLKLA LEA GV Sbjct: 600 NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGV 659 Query: 655 PIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYV 714 P++GTSPD ID AEDRERFQ ++ L L+QP N T A++ A+EIGYPLVVRPSYV Sbjct: 660 PVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYV 719 Query: 715 LGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVM 774 LGGRAMEIV+++ DL RY + AV VS+D+PVLLD FL+DA+EVDVD + DGE IGG+M Sbjct: 720 LGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIM 779 Query: 775 EHIEQAGVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDG 834 EHIEQAGVHSGDSACSLP Y+LS++ + +++Q +A L V GLMNVQFA++ +E Sbjct: 780 EHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNE--- 836 Query: 835 KTVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVK 894 V+++EVNPRA+RTVPFVSKATG+ LAK+AAR M G+SL QG+ EV+PPYYSVK Sbjct: 837 -----VYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVK 891 Query: 895 EAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKN 954 E V PF KFPGVD +LGPEM+STGEVMGVG+TF EAF K+Q+G+ + K G+ LSV+ Sbjct: 892 EVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVRE 951 Query: 955 SDKPRAVQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIA 1014 DK R V +A L+ GF + AT GTA + AGI VNKV EGRPHI D +KN E Sbjct: 952 GDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYT 1011 Query: 1015 LVVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLESLDVYDLQGLHK 1074 ++NT +R AI DS IR SAL +V TT+ G A + + V +Q +H Sbjct: 1012 YIINTTSGRR-AIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHA 1070 Query: 1075 AI 1076 I Sbjct: 1071 QI 1072 >STM0067 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Sty Salmonella typhimurium LT2 Length = 1075 Score = 1503 bits (3890), Expect = 0.0, Method: Compositional matrix adjust. Identities = 739/1082 (68%), Positives = 866/1082 (80%), Gaps = 16/1082 (1%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTDIKSILI+GAGPI+IGQACEFDYSGAQACKALREEG++VILVNSNPATIMTDPEM Sbjct: 1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 ADATYIEPI W+ V +II KE+PDA+LPTMGGQTALNCAL+L R GVLE++ V +IGAT Sbjct: 61 ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA 120 Query: 121 EAIDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 +AIDKAEDR +F AM KIGL +ARSG++HTMEE+ AV +GFP IIRPSFTMGGTGGG Sbjct: 121 DAIDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGTGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN EEFE IC+RGL+ SPT+ELLI+ESLIGWKEYEMEVVRDK DNCIIVCSIEN D M Sbjct: 181 IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 G+HTGDSITVAPAQTLTDKEYQIMRNAS+AVLREIGV+TGGSNVQF+VNP +GR+IVIEM Sbjct: 241 GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAK+AAKLAVG+TLDEL N+ITGG TPASFEPSIDYVVTKIP Sbjct: 301 NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTT--DREL 418 RF FEKF A+ LTTQMKSVGEVMAIGRT QES QKALRGLEVG G + K + D E Sbjct: 361 RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA 420 Query: 419 ---IEKELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKDV 475 I +EL + G DRIWY+ DAF G S++ V LT+ID WFL QI+E+V +E + +V Sbjct: 421 LTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKV-AEV 479 Query: 476 ALESLDKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLNVRPVFKRVDTCAGEFSTD 535 + L+ L QLK+KGF+D RLAKL + +R+ R + ++ PV+KRVDTCA EF+TD Sbjct: 480 GITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATD 539 Query: 536 TAYMYSTYDEECESNPT-DKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMV 594 TAYMYSTY++ECE+NP+ D+ KIMVLGGGPNRIGQGIEFDYCCVHA+LA+R+DGYETIMV Sbjct: 540 TAYMYSTYEDECEANPSIDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMV 599 Query: 595 NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGV 654 NCNPETVSTDYDTSDRLYFEPVTLEDVLEIV EKP GVIVQYGGQTPLKLA LEA GV Sbjct: 600 NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGV 659 Query: 655 PIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYV 714 P++GTSPD ID AEDRERFQ + L L+QP N T A++ A+EIGYPLVVRPSYV Sbjct: 660 PVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEQAVEKAKEIGYPLVVRPSYV 719 Query: 715 LGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVM 774 LGGRAMEIV+++ DL RY + AV VS+D+PVLLDRFL+DA+EVDVD + DGE IGG+M Sbjct: 720 LGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGEMVLIGGIM 779 Query: 775 EHIEQAGVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDG 834 EHIEQAGVHSGDSACSLP Y+LS++ + +++Q +A L V GLMNVQFA++ +E Sbjct: 780 EHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKDNE--- 836 Query: 835 KTVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVK 894 V+++EVNPRA+RTVPFVSKATG+ LAK+AAR M G+SL QG+ E++PPYYSVK Sbjct: 837 -----VYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLTEQGVTQEIIPPYYSVK 891 Query: 895 EAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKN 954 E V PF KFPGVD +LGPEM+STGEVMGVG+TF EAF K+Q+G+ + K G+ LSV+ Sbjct: 892 EVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRALLSVRE 951 Query: 955 SDKPRAVQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIA 1014 DK R V +A L+ GF + AT GTA + AGI VNKV EGRPHI D +KN E Sbjct: 952 GDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYT 1011 Query: 1015 LVVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLESLDVYDLQGLHK 1074 ++NT +R AI DS IR SAL +V TT+ G A + + V +Q +H Sbjct: 1012 YIINTTAGRR-AIEDSRVIRRSALQYKVHYDTTLNGGFATTMALNADATEKVTSVQEMHA 1070 Query: 1075 AI 1076 I Sbjct: 1071 QI 1072 >YPO0482 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) Ype Yersinia pestis Length = 1077 Score = 1502 bits (3889), Expect = 0.0, Method: Compositional matrix adjust. Identities = 746/1082 (68%), Positives = 863/1082 (79%), Gaps = 16/1082 (1%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTDIKSILI+GAGPI+IGQACEFDYSGAQACKALREEG++VILVNSN ATIMTDPEM Sbjct: 1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNLATIMTDPEM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 ADATYIEPI W+ V +II KE+PDA+LPTMGGQTALNCAL+L R GVL ++ V +IGAT Sbjct: 61 ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA 120 Query: 121 EAIDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 +AIDKAEDR +F AM KIGL +ARSG++H MEE+ AV +GFP IIRPSFTMGGTGGG Sbjct: 121 DAIDKAEDRRRFDIAMKKIGLDTARSGIAHNMEEALAVAADVGFPCIIRPSFTMGGTGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN EEFE IC+RGL+ SPT ELLI+ESLIGWKEYEMEVVRDK DNCIIVCSIEN D M Sbjct: 181 IAYNREEFEEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 G+HTGDSITVAPAQTLTDKEYQIMRNAS+AVLREIGV+TGGSNVQFSVNP +GR+IVIEM Sbjct: 241 GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKNGRLIVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAKIAAKLAVG+TLDEL N+ITGG TPASFEPSIDYVVTKIP Sbjct: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTT--DREL 418 RF FEKF A+ LTTQMKSVGEVMAIGRT QES QKALRGLEVG G + K + D E Sbjct: 361 RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA 420 Query: 419 ---IEKELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKDV 475 I +EL E G +RIWY+ DAF G S++ V LT++D WFL QI+E+V +E + ++ Sbjct: 421 LTKIRRELKEAGAERIWYIADAFRAGMSVDGVFNLTNVDRWFLVQIEELVRLEESV-AEL 479 Query: 476 ALESLDKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLNVRPVFKRVDTCAGEFSTD 535 + L + LK+KGF+D RLAKL+ ++ VR+ R K + PV+KRVDTCA EFSTD Sbjct: 480 GINGLTAEFMRHLKRKGFADARLAKLVGAAESEVRKLRYKYGLHPVYKRVDTCAAEFSTD 539 Query: 536 TAYMYSTYDEECESNPT-DKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMV 594 TAYMYSTY+EECESNPT D+ K+MVLGGGPNRIGQGIEFDYCCVHA+LA+R+DGYETIMV Sbjct: 540 TAYMYSTYEEECESNPTSDRPKVMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMV 599 Query: 595 NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGV 654 NCNPETVSTDYDTSDRLYFE VTLEDVLEIV EKP GVIVQYGGQTPLKLA +LEA GV Sbjct: 600 NCNPETVSTDYDTSDRLYFESVTLEDVLEIVRIEKPQGVIVQYGGQTPLKLARELEAAGV 659 Query: 655 PIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYV 714 PI+GTSPD ID AEDRERFQ+ + LGL+QP N T T A++ A +GYPLVVRPSYV Sbjct: 660 PIIGTSPDAIDRAEDRERFQQAVNRLGLKQPANATVATIEQAVEKATGLGYPLVVRPSYV 719 Query: 715 LGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVM 774 LGGRAMEIV+++ DL RY + AV VS+D+PVLLDRFL+DA+EVDVD + DGER IGG+M Sbjct: 720 LGGRAMEIVYDEIDLRRYFQNAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIM 779 Query: 775 EHIEQAGVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDG 834 EHIEQAGVHSGDSACSLP Y+LSK+ + +++Q +A L V GLMNVQFA++ +E Sbjct: 780 EHIEQAGVHSGDSACSLPAYTLSKEIQDVMRQQVEKLAFELCVRGLMNVQFAVKNNE--- 836 Query: 835 KTVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVK 894 V+++EVNPRA+RTVPFVSKATG+ LAKIAAR MVGQSL QG+ E++PPYYSVK Sbjct: 837 -----VYLIEVNPRAARTVPFVSKATGMPLAKIAARVMVGQSLAEQGMLEEIIPPYYSVK 891 Query: 895 EAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKN 954 E V PF KFPGVD ILGPEM+STGEVMGVG+TF EAF K+ +G+ + KSG+ LSV+ Sbjct: 892 EVVLPFNKFPGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSQSGMKKSGRALLSVRE 951 Query: 955 SDKPRAVQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIA 1014 DK R V +A L+ GF + AT GTA + AGI VNKV EGRPHI D +KN E Sbjct: 952 GDKHRVVDLAAKLLKQGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYT 1011 Query: 1015 LVVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLESLDVYDLQGLHK 1074 +VNT R AI DS IR SAL +V TT+ G A + + V +Q +H Sbjct: 1012 YIVNTT-AGRQAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADPTDQVISVQEMHA 1070 Query: 1075 AI 1076 I Sbjct: 1071 KI 1072 >ZcarB [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) EcZ Escherichia coli O157:H7 EDL933 Length = 1073 Score = 1501 bits (3885), Expect = 0.0, Method: Compositional matrix adjust. Identities = 739/1082 (68%), Positives = 864/1082 (79%), Gaps = 16/1082 (1%) Query: 1 MPKRTDIKSILIIGAGPIIIGQACEFDYSGAQACKALREEGFKVILVNSNPATIMTDPEM 60 MPKRTDIKSILI+GAGPI+IGQACEFDYSGAQACKALREEG++VILVNSNPATIMTDPEM Sbjct: 1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60 Query: 61 ADATYIEPITWQAVERIIAKEKPDAILPTMGGQTALNCALDLHRHGVLEKYKVELIGATP 120 ADATYIEPI W+ V +II KE+PDA+LPTMGGQTALNCAL+L R GVLE++ V +IGAT Sbjct: 61 ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA 120 Query: 121 EAIDKAEDRSKFKQAMTKIGLGSARSGVSHTMEESWAVQKTIGFPVIIRPSFTMGGTGGG 180 +AIDKAEDR +F AM KIGL +ARSG++HTMEE+ AV +GFP IIRPSFTMGG+GGG Sbjct: 121 DAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGG 180 Query: 181 IAYNAEEFETICKRGLEASPTSELLIEESLIGWKEYEMEVVRDKADNCIIVCSIENLDPM 240 IAYN EEFE IC RGL+ SPT ELLI+ESLIGWKEYEMEVVRDK DNCIIVCSIEN D M Sbjct: 181 IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM 240 Query: 241 GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSVNPADGRMIVIEM 300 G+HTGDSITVAPAQTLTDKEYQIMRNAS+AVLREIGV+TGGSNVQF+VNP +GR+IVIEM Sbjct: 241 GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM 300 Query: 301 NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP 360 NPRVSRSSALASKATGFPIAK+AAKLAVG+TLDEL N+ITGG TPASFEPSIDYVVTKIP Sbjct: 301 NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP 360 Query: 361 RFTFEKFPQADKHLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGMNEKTT--DREL 418 RF FEKF A+ LTTQMKSVGEVMAIGRT QES QKALRGLEVG G + K + D E Sbjct: 361 RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA 420 Query: 419 ---IEKELGEPGPDRIWYVGDAFAQGFSLEEVHGLTHIDPWFLSQIKEIVDIELWLEKDV 475 I +EL + G +RIWY+ DAF G S++ V LT+ID WFL QI+E+V +E + +V Sbjct: 421 LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKV-AEV 479 Query: 476 ALESLDKATLFQLKQKGFSDRRLAKLLKTTDTAVREQRKKLNVRPVFKRVDTCAGEFSTD 535 + L+ L QLK+KGF+D RLAKL + +R+ R + ++ PV+KRVDTCA EF+TD Sbjct: 480 GITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATD 539 Query: 536 TAYMYSTYDEECESNP-TDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGYETIMV 594 TAYMYSTY+EECE+NP TD++KIMVLGGGPNRIGQGIEFDYCCVHA+LA+R+DGYETIMV Sbjct: 540 TAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMV 599 Query: 595 NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVDKEKPVGVIVQYGGQTPLKLALDLEANGV 654 NCNPETVSTDYDTSDRLYFEPVTLEDVLEIV EKP GVIVQYGGQTPLKLA LEA GV Sbjct: 600 NCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGV 659 Query: 655 PIVGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARTEADALQLAQEIGYPLVVRPSYV 714 P++GTSPD ID AEDRERFQ + L L+QP N T A++ A+EIGYPLVVRPSYV Sbjct: 660 PVIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYV 719 Query: 715 LGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIEVDVDCLSDGERTFIGGVM 774 LGGRAMEIV+++ DL RY + AV VS+D+PVLLD FL+DA+EVDVD + DGE IGG+M Sbjct: 720 LGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIM 779 Query: 775 EHIEQAGVHSGDSACSLPPYSLSKDTIEELKRQTALMAKGLNVVGLMNVQFAIQQSEVDG 834 EHIEQAGVHSGDSACSLP Y+LS++ + +++Q +A L V GLMNVQFA++ +E Sbjct: 780 EHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNE--- 836 Query: 835 KTVDTVFVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDSQGIKNEVVPPYYSVK 894 V+++EVNPRA+RTVPFVSKATG+ LAK+AAR M G+SL QG+ EV+PPYYSVK Sbjct: 837 -----VYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVK 891 Query: 895 EAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQMGAGVKLPKSGKVFLSVKN 954 E V PF KFPGVD +LGPEM+STGEVMGVG+TF EAF K+Q+G+ + K G+ LSV+ Sbjct: 892 EVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVRE 951 Query: 955 SDKPRAVQVARDLVALGFSIVATKGTAAAISAAGIPVATVNKVVEGRPHIVDMVKNNEIA 1014 DK R V +A L+ GF + AT GTA + AGI VNKV EGRPHI D +KN E Sbjct: 952 GDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYT 1011 Query: 1015 LVVNTVEEKRNAIADSGAIRTSALAARVTTFTTIAGAEAAVEGMRHLESLDVYDLQGLHK 1074 ++NT +R AI DS IR SAL +V TT+ G A + + V +Q +H Sbjct: 1012 YIINTTSGRR-AIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHA 1070 Query: 1075 AI 1076 I Sbjct: 1071 QI 1072