BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0001.p (438 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0817 [MU] COG1538 Outer membrane protein Rso Ralstonia solana... 650 0.0 CC0806 [MU] COG1538 Outer membrane protein Ccr Caulobacter vibri... 486 e-137 PA0427 [MU] COG1538 Outer membrane protein Pae Pseudomonas aerug... 481 e-135 STM0350 [MU] COG1538 Outer membrane protein Sty Salmonella typhi... 413 e-115 RSc0009 [MU] COG1538 Outer membrane protein Rso Ralstonia solana... 402 e-112 YPO3481 [MU] COG1538 Outer membrane protein Ype Yersinia pestis 366 e-101 PA4597 [MU] COG1538 Outer membrane protein Pae Pseudomonas aerug... 333 5e-91 ECs1865 [MU] COG1538 Outer membrane protein Ecs Escherichia coli... 327 4e-89 NMB1714 [MU] COG1538 Outer membrane protein Nme Neisseria mening... 325 1e-88 NMA1968 [MU] COG1538 Outer membrane protein NmA Neisseria mening... 316 7e-86 >RSp0817 [MU] COG1538 Outer membrane protein Rso Ralstonia solanacearum Length = 491 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/431 (75%), Positives = 379/431 (87%) Query: 1 VADIGWRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSE 60 VA+IGWRDVFTDPSLQ+VI LAL NNRDLRVAVLN+EKARAQY VQ AALFP++KA+ SE Sbjct: 54 VAEIGWRDVFTDPSLQRVIDLALANNRDLRVAVLNLEKARAQYRVQDAALFPTVKASGSE 113 Query: 61 TASRTPGDLSSTGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQ 120 +ASRTP LS+TG + S +Y+ATLGFSAYELDLFGRVRSL QAL+ +L+T EARRS+Q Sbjct: 114 SASRTPAALSATGQPVVSHTYSATLGFSAYELDLFGRVRSLSAQALEQYLATVEARRSSQ 173 Query: 121 ISLIAEVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVE 180 ISL+AEVATA+LTLA+DQD L+LAQDTL SQS +Y L QRS+ELG++S LTLRQ+QTSV+ Sbjct: 174 ISLVAEVATAYLTLAADQDLLKLAQDTLSSQSDTYRLNQRSYELGTASRLTLRQSQTSVD 233 Query: 181 SARVDVESYTAQVDQDRNALVLLVGKDLPAALLPQGLPDTRLAAASPLATIPPGLPSDLL 240 +ARVDVE YTAQV QDRNALVLLVG D+PA LLP+ LPD A+ S LATIPPGL SDLL Sbjct: 234 AARVDVERYTAQVAQDRNALVLLVGADVPAELLPRSLPDPSAASGSVLATIPPGLASDLL 293 Query: 241 QRRADIVQAERDLRAANANIGAARAAFYPSITLTANAGTASARLAGLFKGGSGSWSFVPQ 300 QRR DI+QAE DL+AANANIGAARAAF+PSI+LTA+AGT+SA LAGLFKGGSG WSF PQ Sbjct: 294 QRRPDILQAEHDLKAANANIGAARAAFFPSISLTASAGTSSASLAGLFKGGSGVWSFGPQ 353 Query: 301 ISLPIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEAL 360 ISLPIFDGGAN+ANLDIA SRDI++AQYEKAIQTAFREVSDALAQR TLGRQL AQ++L Sbjct: 354 ISLPIFDGGANRANLDIANASRDIALAQYEKAIQTAFREVSDALAQRGTLGRQLDAQQSL 413 Query: 361 VQASDEAFRLSQARYNSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGG 420 V A+ ++++L+ AR+ GVDSYL VLDSQR+LY+AQ+NLI T+LSR TNL TFYKTLGGG Sbjct: 414 VDATSDSYQLATARFKRGVDSYLNVLDSQRSLYTAQQNLINTRLSRLTNLATFYKTLGGG 473 Query: 421 WVERTGTPVAS 431 WVE +G PVA+ Sbjct: 474 WVETSGAPVAA 484 >CC0806 [MU] COG1538 Outer membrane protein Ccr Caulobacter vibrioides Length = 467 Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust. Identities = 255/419 (60%), Positives = 313/419 (74%), Gaps = 4/419 (0%) Query: 2 ADIGWRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSET 61 AD+ WR V DP LQ V+ LAL+ NRDLRVAVLNIEKARAQYGVQR+ALFP + A SE Sbjct: 49 ADLDWRQVLVDPRLQGVVDLALQQNRDLRVAVLNIEKARAQYGVQRSALFPGVSGAVSEQ 108 Query: 62 ASRTPGDLSSTGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQI 121 RTP S TG + + AT+GF+AYELDLFGRVRSLK+ ALQS+L+T + RS ++ Sbjct: 109 RGRTPASTSPTGQPFETDVFNATIGFTAYELDLFGRVRSLKDAALQSYLATEQTSRSVRV 168 Query: 122 SLIAEVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVES 181 SLIAE+A AWLTLA+DQ+RL LA+ TL ++ S L ++ + G+ S L LR A+T E+ Sbjct: 169 SLIAEIANAWLTLAADQERLALAKTTLATREDSLRLVRQRVDGGAGSLLDLRNAETLAET 228 Query: 182 ARVDVESYTAQVDQDRNALVLLVGKDLPAALLPQGLPDTRLAAASPLATIPPGLPSDLLQ 241 AR DV YTAQV QDRNAL LL G DLP LLP G RL A S LA +P GLPSD+L Sbjct: 229 ARADVAVYTAQVAQDRNALTLLAGGDLPVDLLPPG----RLDADSVLADLPAGLPSDVLA 284 Query: 242 RRADIVQAERDLRAANANIGAARAAFYPSITLTANAGTASARLAGLFKGGSGSWSFVPQI 301 RR D++ AER L+AANANIGAARAAF+P I+LT +AG+AS L GLFK G+ WSF PQI Sbjct: 285 RRPDVLAAERQLQAANANIGAARAAFFPRISLTGSAGSASTDLDGLFKSGTSIWSFTPQI 344 Query: 302 SLPIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEALV 361 SLPIF GGAN ANL+I+ RDI+VA YEK +QTAFREVSDAL+ R T+ +L AQE L Sbjct: 345 SLPIFAGGANVANLNISKADRDIAVATYEKTVQTAFREVSDALSVRATVADRLTAQERLT 404 Query: 362 QASDEAFRLSQARYNSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGG 420 A+ ++ RLSQ R ++G+DS LT+LD+QR+LY+AQ+ LI +L++ TNLVT YKTLGGG Sbjct: 405 AAAADSTRLSQQRRDAGLDSALTLLDAQRSLYTAQQGLISARLAQATNLVTLYKTLGGG 463 >PA0427 [MU] COG1538 Outer membrane protein Pae Pseudomonas aeruginosa Length = 485 Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust. Identities = 252/421 (59%), Positives = 319/421 (75%), Gaps = 7/421 (1%) Query: 2 ADIGWRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSET 61 ADIGWR+ F DP LQQ+I +ALENNRDLRVA LN+E RAQY +QRA LFP I S T Sbjct: 53 ADIGWREFFRDPQLQQLIGVALENNRDLRVAALNVEAFRAQYRIQRADLFPRIGVDGSGT 112 Query: 62 ASRTPGDLSSTGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQI 121 R PGDLS+TGS S Y TLG +A+ELDLFGR+RSL++QAL+ +L+T +A+RS Q Sbjct: 113 RQRLPGDLSTTGSPAISSQYGVTLGTTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQT 172 Query: 122 SLIAEVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVES 181 +L+A VATA+LTL +DQ +L+L +DTL + S+ LTQRS+++G +SAL LRQAQT+VE Sbjct: 173 TLVASVATAYLTLKADQAQLQLTKDTLGTYQKSFDLTQRSYDVGVASALDLRQAQTAVEG 232 Query: 182 ARVDVESYTAQVDQDRNALVLLVGKDLPAALLPQGLP-DTRLAAASPLATIPPGLPSDLL 240 AR + YT V QD+NALVLL+G +PA L PQGL D L L +P GLPSDLL Sbjct: 233 ARATLAQYTRLVAQDQNALVLLLGSGIPANL-PQGLGLDQTL-----LTEVPAGLPSDLL 286 Query: 241 QRRADIVQAERDLRAANANIGAARAAFYPSITLTANAGTASARLAGLFKGGSGSWSFVPQ 300 QRR DI++AE L AANA+IGAARAAF+PSI+LTANAGT S +L+GLF GSGSW F P Sbjct: 287 QRRPDILEAEHQLMAANASIGAARAAFFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPS 346 Query: 301 ISLPIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEAL 360 I+LPIF G+ +A+LD A + +DI+VAQYEKAIQTAF+EV+D LA R T QLQAQ L Sbjct: 347 INLPIFTAGSLRASLDYAKIQKDINVAQYEKAIQTAFQEVADGLAARGTFTEQLQAQRDL 406 Query: 361 VQASDEAFRLSQARYNSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGG 420 V+ASDE ++L+ RY +GVD+YLT+LD+QR+L++AQ+ LI +L++ T+ V YK LGGG Sbjct: 407 VKASDEYYQLADKRYRTGVDNYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGG 466 Query: 421 W 421 W Sbjct: 467 W 467 >STM0350 [MU] COG1538 Outer membrane protein Sty Salmonella typhimurium LT2 Length = 503 Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust. Identities = 216/422 (51%), Positives = 296/422 (70%) Query: 2 ADIGWRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSET 61 ADIGWRD F DP LQ++IA+AL NNRDLR A LN+E ARA Y +QRA + P++ AT+ Sbjct: 75 ADIGWRDFFHDPLLQELIAIALRNNRDLRKAGLNVEAARALYRIQRAEMLPTLGIATAMD 134 Query: 62 ASRTPGDLSSTGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQI 121 ASRTP DLS + +R Y A +A+ELDL+GRVRSL +QAL ++++ E + ++ Sbjct: 135 ASRTPADLSVMDESEINRRYEAAGATTAWELDLWGRVRSLSDQALAAYMALDETYIAARM 194 Query: 122 SLIAEVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVES 181 SL++EVA+AWLTL +D++ LRL +DTL +Q SSY LT + G+++ L LR A+ ++ S Sbjct: 195 SLVSEVASAWLTLRADRELLRLTEDTLAAQKSSYTLTTQLARTGNATQLDLRMAEIALRS 254 Query: 182 ARVDVESYTAQVDQDRNALVLLVGKDLPAALLPQGLPDTRLAAASPLATIPPGLPSDLLQ 241 A ++ +YT Q+ +DRNAL LL+G+ L L + L + T+P GLPSDLL Sbjct: 255 AEINRAAYTRQLARDRNALELLLGQPLTPELSRRLNEAVTLTEGAIPTTLPGGLPSDLLV 314 Query: 242 RRADIVQAERDLRAANANIGAARAAFYPSITLTANAGTASARLAGLFKGGSGSWSFVPQI 301 RR DI AE LR ANA IGAARAAF+P+I+LT +AGTASA L+GLF+ GSGSW F+PQI Sbjct: 315 RRPDIRAAEYRLRGANARIGAARAAFFPTISLTGSAGTASASLSGLFEPGSGSWRFLPQI 374 Query: 302 SLPIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEALV 361 +LP+F GGA +A+LD A V + I +A+YE IQ AFR+V+D LA + TL Q+Q+++ V Sbjct: 375 TLPLFHGGALRADLDRAHVQKQIEIARYENVIQQAFRDVADGLAGQRTLNDQVQSEQRAV 434 Query: 362 QASDEAFRLSQARYNSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGGW 421 +AS A+ L+ R+ GVD YLT+LD+ R LY AQ+ L+ T+L + N++ YK LGGGW Sbjct: 435 EASQIAYELAGLRFQEGVDDYLTLLDTHRMLYGAQQRLVRTRLMQQLNIINLYKALGGGW 494 Query: 422 VE 423 E Sbjct: 495 RE 496 >RSc0009 [MU] COG1538 Outer membrane protein Rso Ralstonia solanacearum Length = 514 Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust. Identities = 221/425 (52%), Positives = 287/425 (67%), Gaps = 5/425 (1%) Query: 3 DIGWRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSETA 62 D+GWR+ F DP LQ++I L+LENNRDLRVA+LNIE ARAQY Q A L P I A + T Sbjct: 68 DLGWREFFPDPRLQRLIGLSLENNRDLRVAILNIEAARAQYRQQIADLLPPINATATYTR 127 Query: 63 SRTPGDLSSTGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQIS 122 S TP +S TG + ++ Y +G S Y+++LF V + A S+L+T E +R+TQIS Sbjct: 128 SLTPQSISQTGQDINTKQYQLGVGISNYQVNLFS-VGDVTSSARASYLATEEGQRATQIS 186 Query: 123 LIAEVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVESA 182 LI++VA A+L + ++L LAQ TL+ + Y L ++ F++G+SSAL LRQ +T VESA Sbjct: 187 LISQVAKAYLNERAYAEQLELAQQTLKGREDYYKLAKQRFDVGASSALDLRQNETLVESA 246 Query: 183 RVDVESYTAQVDQDRNALVLLVGKDLPAALLPQGLPDTRLAAASPLATIPPGLPSDLLQR 242 RV V T Q Q NALVLLVG LPA L P T +++ +A IPPGLPS+LL++ Sbjct: 247 RVSVAQLTRQYAQATNALVLLVGSPLPADLPP----PTTVSSEKIVADIPPGLPSELLEQ 302 Query: 243 RADIVQAERDLRAANANIGAARAAFYPSITLTANAGTASARLAGLFKGGSGSWSFVPQIS 302 R DI QAE+ L AANANIG ARAAF+PS+ LT+N GTAS L LFK G+G WSFVP ++ Sbjct: 303 RPDIRQAEQKLVAANANIGVARAAFFPSLGLTSNVGTASTALHDLFKSGTGLWSFVPNLT 362 Query: 303 LPIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEALVQ 362 LPIF+ G N NLD+ ++ I+VA YEK IQTAF+EVSDAL R TL Q+ AQ+ Sbjct: 363 LPIFNWGTNVFNLDLTKANQKIAVANYEKTIQTAFQEVSDALVARGTLDEQVAAQKRFRD 422 Query: 363 ASDEAFRLSQARYNSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGGWV 422 A+ E LS RY +GV S+L VLD+QR L+SA + L+ T+L+R TN V Y LGGG Sbjct: 423 ATAERLTLSDQRYRNGVSSFLDVLDAQRDLFSADQTLVQTRLARLTNAVDLYTALGGGLQ 482 Query: 423 ERTGT 427 E + T Sbjct: 483 EHSTT 487 >YPO3481 [MU] COG1538 Outer membrane protein Ype Yersinia pestis Length = 468 Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust. Identities = 208/423 (49%), Positives = 285/423 (67%), Gaps = 11/423 (2%) Query: 2 ADIGWRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSET 61 ADI W++ DP L+QVIALALE+NRDLR A+ +IE ARAQYGVQRAA P++ A + + Sbjct: 46 ADIPWQETIIDPKLRQVIALALESNRDLRQAIADIEAARAQYGVQRAAQIPTVNAGVNGS 105 Query: 62 ASRTPGDLS-STGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQ 120 R D S + S+SY A SA+ELDLFG+ SL +++L+T EA ++T+ Sbjct: 106 RGRGLSDTSDGNNNTAISQSYGAQASVSAFELDLFGKKSSLSHAEFETYLATEEAAKTTR 165 Query: 121 ISLIAEVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVE 180 I+LIA+ ATAW+TLA+DQ++L LA++TL+S S L Q + G +S + + +T + Sbjct: 166 ITLIADTATAWVTLAADQNQLLLAEETLKSAEQSLKLAQLRQKNGIASRIDVAAMETLYQ 225 Query: 181 SARVDVESYTAQVDQDRNALVLLVGKDLPAALLP---QGLPDTRLAAASPLATIPPGLPS 237 SAR DV Y V QD+NAL LLVG+ + A LLP LP+ + +P GL S Sbjct: 226 SARADVAQYKTTVAQDKNALDLLVGQPVAAHLLPVTASTLPEV-------IKAVPVGLSS 278 Query: 238 DLLQRRADIVQAERDLRAANANIGAARAAFYPSITLTANAGTASARLAGLFKGGSGSWSF 297 D+L R D+++AE L++ANANIGAARAAF+PS+TLTA+ G +S+ L+ L G+G WS Sbjct: 279 DVLLNRPDVLEAEHKLKSANANIGAARAAFFPSVTLTASGGVSSSALSTLLSEGAGIWSL 338 Query: 298 VPQISLPIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQ 357 P I+LPIFDGGAN+A L+ + + +A YEKAIQTAF+EV+DALA++ T+ Q AQ Sbjct: 339 APAITLPIFDGGANRAALEYSQAQKTGYIAAYEKAIQTAFKEVADALARKATIQEQRAAQ 398 Query: 358 EALVQASDEAFRLSQARYNSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTL 417 +A V A+ E+ L+Q RY G+D+YL +LD+QRTLY+AQ LI Q + NL+T YK L Sbjct: 399 QAYVAAAQESVELAQKRYKQGIDTYLNMLDAQRTLYAAQTRLIAVQQIQTNNLITLYKVL 458 Query: 418 GGG 420 GGG Sbjct: 459 GGG 461 >PA4597 [MU] COG1538 Outer membrane protein Pae Pseudomonas aeruginosa Length = 479 Score = 333 bits (854), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 195/420 (46%), Positives = 271/420 (64%), Gaps = 4/420 (0%) Query: 4 IGWRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSETAS 63 + W+ D L++++ +AL+NNR LR +L+IE ARAQY +QRA P + AA + Sbjct: 52 LDWKSFIVDAELRRLVDMALDNNRSLRQTLLDIEAARAQYRIQRADRVPGLNAAATGNRQ 111 Query: 64 RTPGDLSSTGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQISL 123 R P DLS+ + + SY L YELDLFGRV+SL + ALQ +L++ EA R+ +I+L Sbjct: 112 RQPADLSAGNRSEVASSYQVGLALPEYELDLFGRVKSLTDAALQQYLASEEAARAARIAL 171 Query: 124 IAEVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVESAR 183 +AEV+ A+L+ RL L + TL S+ S+AL + G+++AL ++A VE AR Sbjct: 172 VAEVSQAYLSYDGALRRLALTRQTLVSREYSFALIDQRRAAGAATALDYQEALGLVEQAR 231 Query: 184 VDVESYTAQVDQDRNALVLLVGKDLPAALLPQGLPDTRLAAASPLATIPPGLPSDLLQRR 243 + E Q Q NALVLL+G D A +P+ P R L I PG PS+L++RR Sbjct: 232 AEQERNLRQKQQAFNALVLLLGSDDAAQAIPRS-PGQR---PKLLQDIAPGTPSELIERR 287 Query: 244 ADIVQAERDLRAANANIGAARAAFYPSITLTANAGTASARLAGLFKGGSGSWSFVPQISL 303 DI+ AE LRA NA+IGAARAAF+P I+LT + GT+SA ++GLF GGS SWSF+P ++L Sbjct: 288 PDILAAEHRLRARNADIGAARAAFFPRISLTGSFGTSSAEMSGLFDGGSRSWSFLPTLTL 347 Query: 304 PIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEALVQA 363 PIFDGG N+ANL +A +D +VA YE IQTAFREV+DALA +TL R+ +A AL + Sbjct: 348 PIFDGGRNRANLSLAEARKDSAVAAYEGTIQTAFREVADALAASDTLRREEKALRALANS 407 Query: 364 SDEAFRLSQARYNSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGGWVE 423 S+EA +L++ARY SGVD++L LD+QR+ + + I R LV ++ LGGGW E Sbjct: 408 SNEALKLAKARYESGVDNHLRYLDAQRSSFLNEIAFIDGSTQRQIALVDLFRALGGGWDE 467 >ECs1865 [MU] COG1538 Outer membrane protein Ecs Escherichia coli O157:H7 Length = 457 Score = 327 bits (837), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 181/418 (43%), Positives = 272/418 (65%), Gaps = 16/418 (3%) Query: 6 WRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSETASRT 65 W+ V DP LQQV+ +AL +NRD++ A+ +I+ ARA YG A+LFP++ AA S T SR+ Sbjct: 48 WQQVIHDPRLQQVVTIALNSNRDVQKAIADIDSARALYGQTNASLFPTVNAALSSTRSRS 107 Query: 66 PGDLSSTGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQISLIA 125 + G+ T+ A S++ LDLFGR +SL A +++L++ ++T+++LIA Sbjct: 108 LAN----GTETTAE---ADGTVSSFTLDLFGRNQSLSRAARETWLASEFTAQNTRLTLIA 160 Query: 126 EVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVESARVD 185 E++TAWLTLA+D L LA++T+ S +S + QR ++G+++A + +A + + AR Sbjct: 161 EISTAWLTLAADNSNLALAKETMTSAENSLKIIQRQQQVGTAAATDVSEAMSVYQQARAS 220 Query: 186 VESYTAQVDQDRNALVLLVGKDLPAALLP---QGLPDTRLAAASPLATIPPGLPSDLLQR 242 V SY QV QD+NAL LL G L LLP + LP+ ++ +P G+ SD+L R Sbjct: 221 VASYQTQVMQDKNALNLLAGTTLEENLLPGTLESLPEQMIS------LVPAGVSSDVLLR 274 Query: 243 RADIVQAERDLRAANANIGAARAAFYPSITLTANAGTASARLAGLFKGGSGSWSFVPQIS 302 R DI +AE +L++ANA+IGAARA F+P+I+LTA+AG S L+ LF G WSF P ++ Sbjct: 275 RPDIQEAEHNLKSANADIGAARANFFPTISLTASAGVGSDALSSLFSHGMQIWSFTPSVT 334 Query: 303 LPIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEALVQ 362 LP+F GG+N A L A + +A YEK +Q AF++V++ALA+R TL QL AQ V+ Sbjct: 335 LPLFTGGSNLAQLRYAEAQKRGLIATYEKTVQRAFKDVANALARRTTLEEQLDAQRQYVK 394 Query: 363 ASDEAFRLSQARYNSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGG 420 A + + RY +GV YLTVL +QR+L+SAQ+ L+ QL+ +TN +T +++LGGG Sbjct: 395 AEQQTVDVGLRRYQTGVGDYLTVLTAQRSLWSAQQELLALQLTDFTNRITLWQSLGGG 452 >NMB1714 [MU] COG1538 Outer membrane protein Nme Neisseria meningitidis MC58 Length = 467 Score = 325 bits (834), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 185/427 (43%), Positives = 256/427 (59%), Gaps = 14/427 (3%) Query: 3 DIGWRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSET- 61 D+GW D F DP LQ++I +ALE N LR AVLN E R QY ++R L P++ A +++ Sbjct: 51 DLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTLAANANDSR 110 Query: 62 -ASRTPGDLSSTGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQ 120 S + G++SS SY LG ++YELDLFGRVRS E ALQ + ++ R + Sbjct: 111 QGSLSGGNVSS--------SYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDAAH 162 Query: 121 ISLIAEVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVE 180 +SLIA VA A+ ++ + LAQ L+++ +Y L++ ++ G SA+ LRQ + +E Sbjct: 163 LSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQEALIE 222 Query: 181 SARVDVESYTAQVDQDRNALVLLVGKDLPAALLPQGLPDTRLAAASPLATIPPGLPSDLL 240 SA+ D +Q RNAL L+ + +P L P GLP L + +P GL S++L Sbjct: 223 SAKADYAHAARSREQARNALATLINQPIPEDL-PAGLP---LDKQFFVEKLPAGLSSEVL 278 Query: 241 QRRADIVQAERDLRAANANIGAARAAFYPSITLTANAGTASARLAGLFKGGSGSWSFVPQ 300 R DI AE L+ ANANIGAARAAF+PSI LT GT SA L GLFK G+G WSF P Sbjct: 279 LDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWSFAPS 338 Query: 301 ISLPIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEAL 360 I+LPIF G N+ANLD+A + + + + YE A+Q+AF++V++ALA R L + A Sbjct: 339 ITLPIFTWGTNKANLDVAKLRQQVQIVAYESAVQSAFQDVANALAAREQLDKAYDALSKQ 398 Query: 361 VQASDEAFRLSQARYNSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGG 420 +AS EA RL RY GV L +LD++R+ Y+A+ + QL+R NL YK LGGG Sbjct: 399 SRASKEALRLVGLRYKHGVSGALDLLDAERSSYAAEGAALSAQLTRAENLADLYKALGGG 458 Query: 421 WVERTGT 427 T T Sbjct: 459 LKRDTQT 465 >NMA1968 [MU] COG1538 Outer membrane protein NmA Neisseria meningitidis Z2491 Length = 467 Score = 316 bits (810), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 183/427 (42%), Positives = 253/427 (59%), Gaps = 14/427 (3%) Query: 3 DIGWRDVFTDPSLQQVIALALENNRDLRVAVLNIEKARAQYGVQRAALFPSIKAATSET- 61 D+GW D F DP LQ++I +ALE N LR AVLN E R QY ++R L P++ A +++ Sbjct: 51 DLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTLAANANDSR 110 Query: 62 -ASRTPGDLSSTGSALTSRSYTATLGFSAYELDLFGRVRSLKEQALQSFLSTAEARRSTQ 120 S + G++SS SY LG ++YELDLFGRVRS E ALQ + ++ R + Sbjct: 111 QGSLSGGNVSS--------SYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDAAH 162 Query: 121 ISLIAEVATAWLTLASDQDRLRLAQDTLESQSSSYALTQRSFELGSSSALTLRQAQTSVE 180 +SLIA VA A+ ++ + LAQ L+++ +Y L++ ++ G SA+ LRQ + +E Sbjct: 163 LSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQEALIE 222 Query: 181 SARVDVESYTAQVDQDRNALVLLVGKDLPAALLPQGLPDTRLAAASPLATIPPGLPSDLL 240 SA+ D +Q RNAL L+ + +P L P GLP L + +P GL S++L Sbjct: 223 SAKADYAHAARSREQARNALATLINQPIPDDL-PAGLP---LDKQFFVEKLPAGLSSEVL 278 Query: 241 QRRADIVQAERDLRAANANIGAARAAFYPSITLTANAGTASARLAGLFKGGSGSWSFVPQ 300 R DI AE L+ ANANIGAARAAF+PSI LT + T SA L GLFK G+G W F P Sbjct: 279 LDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGSVDTHSAELGGLFKSGTGVWLFAPS 338 Query: 301 ISLPIFDGGANQANLDIATVSRDISVAQYEKAIQTAFREVSDALAQRNTLGRQLQAQEAL 360 I+LPIF G N+ANLD+A + + + YE A+Q+AF++V++AL R L + A Sbjct: 339 ITLPIFTWGTNKANLDVAKLRQQAQIVAYEAAVQSAFQDVANALTAREQLDKAYDALSKQ 398 Query: 361 VQASDEAFRLSQARYNSGVDSYLTVLDSQRTLYSAQKNLIGTQLSRWTNLVTFYKTLGGG 420 +AS EA RL RY GV L +LD++R+ YSA+ + QL+R NL YK LGGG Sbjct: 399 SRASKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSAQLTRAENLADLYKALGGG 458 Query: 421 WVERTGT 427 T T Sbjct: 459 LKRDTQT 465