BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0008.p (360 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1174 [R] COG4174 ABC-type uncharacterized transport system, p... 492 e-139 mll5491 Non COG 432 e-121 BMEI1936 [R] COG4174 ABC-type uncharacterized transport system, ... 430 e-120 PA1809 [R] COG4174 ABC-type uncharacterized transport system, pe... 417 e-116 SMc02831 [R] COG4174 ABC-type uncharacterized transport system, ... 415 e-116 AGc318 [R] COG4174 ABC-type uncharacterized transport system, pe... 412 e-115 VCA0590 [R] COG4174 ABC-type uncharacterized transport system, p... 404 e-112 YPO1272 [R] COG4174 ABC-type uncharacterized transport system, p... 402 e-112 STM2217 [R] COG4174 ABC-type uncharacterized transport system, p... 402 e-112 yejB [R] COG4174 ABC-type uncharacterized transport system, perm... 398 e-110 >RSc1174 [R] COG4174 ABC-type uncharacterized transport system, permease component Rso Ralstonia solanacearum Length = 351 Score = 492 bits (1267), Expect = e-139, Method: Compositional matrix adjust. Identities = 250/355 (70%), Positives = 303/355 (85%), Gaps = 5/355 (1%) Query: 7 IWSYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGG-GEASGGGAASG 65 +++Y++KR+LL+IPTL GVV +TF VIQFVPGGPVEQ ++EMKGRG G EASGGG Sbjct: 1 MFAYLIKRLLLLIPTLIGVVTLTFVVIQFVPGGPVEQMLMEMKGRGSGIVEASGGGGME- 59 Query: 66 ASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVKS 125 YRGR+G+D ++I EI+ LYGFDK PVER++ ML F FDLG+S++ H VW L+KS Sbjct: 60 ---YRGRRGVDPEKIKEIRALYGFDKGPVERYFLMLGRFARFDLGESYFQHRSVWELIKS 116 Query: 126 KLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLLV 185 KLPVSISIGLWTF L+YLISVPLGIAKAVR G+RFD ++ +VLVGY+IPGFVLGV LLV Sbjct: 117 KLPVSISIGLWTFFLTYLISVPLGIAKAVRAGSRFDLVSSVIVLVGYAIPGFVLGVLLLV 176 Query: 186 LFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNTF 245 LF GG+F QWFP+RGLTSDNW LSL GK+TDYLWHI LP+TASV+GSFAVITMLT+N F Sbjct: 177 LFGGGTFFQWFPIRGLTSDNWGQLSLPGKVTDYLWHIALPITASVVGSFAVITMLTKNAF 236 Query: 246 LEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFSL 305 LEEIRKQYVLTAR+KGLSERRVL+KH+FRNA+IPLVTGFP+AFI +FF GSLLIE LFSL Sbjct: 237 LEEIRKQYVLTARSKGLSERRVLWKHIFRNAMIPLVTGFPAAFIGAFFTGSLLIEKLFSL 296 Query: 306 DGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFESLAK 360 DGMGL++YE+ ++RDYPVV+GTLY+FTLIGL +L+ D+CYV DPR+ F ++ + Sbjct: 297 DGMGLMSYEAVVQRDYPVVLGTLYVFTLIGLATRLISDVCYVLVDPRIHFGAIGR 351 >mll5491 Non COG Length = 364 Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust. Identities = 209/358 (58%), Positives = 273/358 (76%), Gaps = 10/358 (2%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGE----------AS 58 +YI++R+LLMIPTLFG++AI+FAVIQF PGGPVEQ + ++ +GG + Sbjct: 3 AYILRRILLMIPTLFGIMAISFAVIQFAPGGPVEQVIAKLTNQGGSDRLGGGGGDAGGTN 62 Query: 59 GGGAASGASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGD 118 A +S YRG QG+D + I ++++ +GFDKPP+ERF ML ++ FD G S++ Sbjct: 63 FDVAGDVSSKYRGAQGLDPEFIKKLEKQFGFDKPPLERFGMMLWNYIRFDFGNSYFRDIS 122 Query: 119 VWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFV 178 V L+ K+PVSISIGLW LLSYLIS+PLGI KAV++GT FD T+G+V+VGY+IPGF+ Sbjct: 123 VLDLILEKMPVSISIGLWITLLSYLISIPLGIRKAVKDGTPFDVWTSGVVIVGYAIPGFL 182 Query: 179 LGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVIT 238 G+ L+VLFAGGSF WFPLRG+ SDNW+ LS +GKI DY WH+TLP+TA V+ +FA T Sbjct: 183 FGIMLMVLFAGGSFWDWFPLRGIVSDNWDQLSWLGKIADYFWHMTLPLTALVLSAFATTT 242 Query: 239 MLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLL 298 +LT+N+FLEEIRKQYV+TARAKGLSER+VLY HVFRNA++ ++ GFP AFI++FF GSLL Sbjct: 243 LLTKNSFLEEIRKQYVVTARAKGLSERQVLYGHVFRNAMLIVIAGFPGAFISAFFTGSLL 302 Query: 299 IETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 356 IE +FSLDG+GLL + S + RDYPVV LY+F+L+GL V L+ DL Y W DPR+ FE Sbjct: 303 IENIFSLDGLGLLGFRSVVERDYPVVFANLYIFSLLGLFVGLLSDLIYTWVDPRIDFE 360 >BMEI1936 [R] COG4174 ABC-type uncharacterized transport system, permease component Bme Brucella melitensis Length = 365 Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust. Identities = 201/359 (55%), Positives = 276/359 (76%), Gaps = 11/359 (3%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGG--EASGGGAASGA 66 +YI++R+LLM+PTL G++AI+FAV+QF PGGPVE+ + ++ G+GG SG G+ G Sbjct: 3 AYILRRLLLMVPTLLGIMAISFAVVQFAPGGPVERVIAQLSGQGGDALDRLSGAGSDFGQ 62 Query: 67 SA---------YRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHG 117 SA YRG QG+D Q IA++++ +GFDKPP+ERF ML ++ FD G+S++ Sbjct: 63 SAIDSGSVNSKYRGAQGLDPQFIADLEKQFGFDKPPLERFGQMLWNYMRFDFGRSYFRDI 122 Query: 118 DVWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGF 177 V L+K K+PVSIS+GLW LSY+IS+PLGI KA+++G+RFDT T+ ++++GY+IP F Sbjct: 123 SVIDLIKEKMPVSISLGLWLTFLSYMISIPLGIRKAIKDGSRFDTWTSAVIIIGYAIPSF 182 Query: 178 VLGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVI 237 + + L+V+FAGGSF WFPLRGLTS ++ ++ KI DYLWH+ LPVTA V+ +FA Sbjct: 183 LFAILLIVVFAGGSFFDWFPLRGLTSPDFAQMTWFEKIKDYLWHMVLPVTALVLSAFATT 242 Query: 238 TMLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSL 297 T+LT+N+FLEEIRKQYV TARAKGL+E +VLY+HVFRNA++ ++ GFP AFI++FF GSL Sbjct: 243 TLLTKNSFLEEIRKQYVTTARAKGLTENQVLYRHVFRNAMLIVIAGFPGAFISAFFTGSL 302 Query: 298 LIETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 356 LIET+FSLDG+GLL Y+S I RDYPVV L++F+LIGL+V L+ DL Y W DPR+ F+ Sbjct: 303 LIETIFSLDGLGLLGYQSVINRDYPVVFANLFIFSLIGLLVGLLSDLTYTWIDPRIDFD 361 >PA1809 [R] COG4174 ABC-type uncharacterized transport system, permease component Pae Pseudomonas aeruginosa Length = 360 Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust. Identities = 201/360 (55%), Positives = 270/360 (75%), Gaps = 15/360 (4%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAA----- 63 SYI++R+LL++PTLFG++ I F +IQ PGGPVEQ + +++G +A+ GGA Sbjct: 3 SYILRRLLLIVPTLFGILLINFIIIQAAPGGPVEQMIAKLEGF----DAASGGATGRISG 58 Query: 64 ------SGASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHG 117 S YRG QG+D + + EI+++YGFDK ERF MLK +L D G+SF+ Sbjct: 59 GGGEVAVAGSQYRGAQGLDPELVKEIERMYGFDKSAPERFMIMLKNYLHLDFGQSFFRDA 118 Query: 118 DVWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGF 177 V L+ KLPVSIS+GLW+ L+ YL+S+PLGIAKAVR G+ FD T+ ++VGY+IP F Sbjct: 119 KVTDLIIEKLPVSISLGLWSTLIMYLVSIPLGIAKAVRHGSVFDIWTSSAIIVGYAIPAF 178 Query: 178 VLGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVI 237 + + L+VLFAGGS+ WFPLRGLTS+N++ LSL GK+ DY WH+ LPVTA VIG+FA I Sbjct: 179 LFAILLVVLFAGGSYWDWFPLRGLTSNNFDQLSLGGKVLDYFWHLALPVTALVIGNFATI 238 Query: 238 TMLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSL 297 T+LT+N+FL+EI KQYV+TARAKGL+ERRVLY HVFRNA++ ++ G P+A + FF GSL Sbjct: 239 TLLTKNSFLDEIGKQYVVTARAKGLTERRVLYGHVFRNAMLLVIAGLPAALLGIFFTGSL 298 Query: 298 LIETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFES 357 LIE +FSLDG+GLL++E+A+ RDYPVV GTL++FTL GLV+KL+ D+ Y DPR+ FE+ Sbjct: 299 LIEVIFSLDGLGLLSFEAAMNRDYPVVFGTLFIFTLFGLVMKLISDIVYTLVDPRIDFEN 358 >SMc02831 [R] COG4174 ABC-type uncharacterized transport system, permease component Sme Sinorhizobium meliloti Length = 360 Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust. Identities = 190/354 (53%), Positives = 265/354 (74%), Gaps = 6/354 (1%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGA------ 62 +YI++R+LLMIPT+ G++AI+FAV+QF PGGPVEQ + ++ G SG Sbjct: 3 AYILRRLLLMIPTIVGIMAISFAVVQFAPGGPVEQVISDLTNAAGSDRLSGNAGDLMPVG 62 Query: 63 ASGASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTL 122 YRG QG+D IA++++ +GFDKPP+ERF TM+ ++ FD G+SF+ + V L Sbjct: 63 GGDGGQYRGAQGLDPDFIAKLEKQFGFDKPPLERFVTMMWDYMRFDFGESFFRNTPVIDL 122 Query: 123 VKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVF 182 + K+PVSIS+G+W + SY IS+PLGI KAV +G+ FD T+G+++VGY++P F+ G+ Sbjct: 123 IIQKMPVSISLGVWILIFSYAISIPLGIKKAVSDGSTFDVWTSGVIIVGYAVPSFLFGIL 182 Query: 183 LLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTR 242 L+VLFAGGSF WFPLRGL SDN++ LS KI DY WH+TLP+ ++ +FA T+LT+ Sbjct: 183 LIVLFAGGSFFDWFPLRGLVSDNFDQLSWYEKIIDYFWHMTLPLITLLLSAFATTTLLTK 242 Query: 243 NTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETL 302 N+F++EI+KQYV TARAKGL+ERRVLY HVFRNA++ ++ GFP AFI++FF GSLLIE + Sbjct: 243 NSFIDEIKKQYVTTARAKGLTERRVLYGHVFRNAMLIIIAGFPGAFISAFFTGSLLIEYI 302 Query: 303 FSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 356 FSLDG+G L Y++ ++RDYP+V TL++++L+GLVV LV DL Y W DPR+ FE Sbjct: 303 FSLDGLGRLGYDAVVKRDYPIVFATLFIYSLMGLVVSLVSDLIYTWVDPRIDFE 356 >AGc318 [R] COG4174 ABC-type uncharacterized transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 364 Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust. Identities = 192/358 (53%), Positives = 267/358 (74%), Gaps = 10/358 (2%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRG--------GGGEASG- 59 +YI++R+ LMIPT+ G++ I+F VIQF PGGPVEQ + ++ G+G GGG+ G Sbjct: 3 AYILRRLALMIPTIVGIMGISFLVIQFAPGGPVEQVVAQLTGQGDSASDRLSGGGDLMGQ 62 Query: 60 -GGAASGASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGD 118 GG S YRG QG+D + I ++++ +GFDKPP+ RF M+ ++ FD G SF+ + Sbjct: 63 SGGFDESGSKYRGAQGLDPELIKKLEKQFGFDKPPLTRFLEMMWNYIRFDFGDSFFRNSS 122 Query: 119 VWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFV 178 V L+ KLPVS S+G W ++SY+IS+PLGI KAV +G+ FD T+G++++GY++P F+ Sbjct: 123 VIDLIIDKLPVSASLGFWILIISYVISIPLGIKKAVSDGSTFDVWTSGIIIIGYAVPSFL 182 Query: 179 LGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVIT 238 G+ L+VLFAGGSF WFPLRGL SDN++ L+ KI DY WH+TLP+ A + +FA T Sbjct: 183 FGILLIVLFAGGSFFDWFPLRGLVSDNFDQLNWWQKIIDYFWHLTLPLIALSLSAFATTT 242 Query: 239 MLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLL 298 +LT+N+F++EI+KQYV+TARAKGLSER+VLY HVFRNA++ ++ GFP AFI++FF GSLL Sbjct: 243 LLTKNSFIDEIKKQYVVTARAKGLSERKVLYGHVFRNAMLIVIAGFPGAFISAFFTGSLL 302 Query: 299 IETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 356 IE +FSLDG+G L Y S + RDYP+V GTL++F+L+GLVV L+ DL Y W DPR+ FE Sbjct: 303 IENIFSLDGLGRLGYLSVVNRDYPIVFGTLFIFSLMGLVVGLLSDLIYTWIDPRIDFE 360 >VCA0590 [R] COG4174 ABC-type uncharacterized transport system, permease component Vch Vibrio cholerae Length = 360 Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust. Identities = 187/357 (52%), Positives = 268/357 (75%), Gaps = 8/357 (2%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRG--------GGGEASGG 60 SYI++R+LL++PTL+ ++ I F +IQ PGGPVEQA+ +++G GGG+ Sbjct: 3 SYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEVAA 62 Query: 61 GAASGASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVW 120 + S Y+G +G+D Q + EI + +GFDKP ER++ MLK + TF+ G+S + GDV Sbjct: 63 PTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGDVI 122 Query: 121 TLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLG 180 L+ +LPVSIS+GLW+ LL YLIS+PLGI+KA+ G+RFD ++ +V++GY+IPGF+ Sbjct: 123 DLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFLFA 182 Query: 181 VFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITML 240 + L++LFA G++ WFPLRGL SDN+ SL ++ DY WH+TLP A VIG FA ++ML Sbjct: 183 IILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGFATLSML 242 Query: 241 TRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIE 300 T+N+FL+EI KQYV+TARAKGL ERR+LYKHVFRNA++ ++ GFPSAFI+ FF GS+LIE Sbjct: 243 TKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFFTGSMLIE 302 Query: 301 TLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFES 357 +FSL+G+GLL +E+ I+RDYP+V +LY+ TL+GL++ ++ DL Y+W DPR+ FE+ Sbjct: 303 VMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRIDFEA 359 >YPO1272 [R] COG4174 ABC-type uncharacterized transport system, permease component Ype Yersinia pestis Length = 366 Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust. Identities = 191/361 (52%), Positives = 265/361 (73%), Gaps = 13/361 (3%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMK-GRGGGGEASG-------- 59 +Y+++R+ L+IPTL+ ++ I F ++Q PGGPV+QA+ ++ G G A Sbjct: 3 AYLLRRLFLVIPTLWAIITINFFIVQIAPGGPVDQAIANIELGHTTGFTAGSGDGGLGGA 62 Query: 60 ----GGAASGASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYH 115 A G S YRG +G+D + IAEIKQ +GFDKP +R++ ML ++ FD G S + Sbjct: 63 KAGLNAAQVGDSNYRGSRGLDPEVIAEIKQRFGFDKPLHQRYFDMLWRYVRFDFGDSLFR 122 Query: 116 HGDVWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIP 175 V +L+K LPVSIS+GLW+ L+ YL+S+PLGI KAVR GT FDT ++ L+++GY+IP Sbjct: 123 GESVMSLIKQSLPVSISLGLWSTLIIYLVSIPLGIKKAVRNGTAFDTWSSTLIIIGYAIP 182 Query: 176 GFVLGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFA 235 F+ + L+VLF+GGS+ FPLRGL S NW++L KITDYLWHITLPV A+VIG FA Sbjct: 183 SFLFAILLVVLFSGGSYFDLFPLRGLVSSNWDTLPWYSKITDYLWHITLPVLATVIGGFA 242 Query: 236 VITMLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAG 295 +TMLT+N+FL+EIRKQYV+TARAKGL E ++LY+HVFRNA++ ++ GFP+ F++ FF G Sbjct: 243 TLTMLTKNSFLDEIRKQYVVTARAKGLPEEKILYRHVFRNAMLLVIAGFPATFVSMFFTG 302 Query: 296 SLLIETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQF 355 SLLIE +FSL+G+GLL Y++ I+RDYPV+ GTLY+FTLIGL++ +V D+ Y DPR+ F Sbjct: 303 SLLIEVMFSLNGLGLLGYDATIQRDYPVMFGTLYIFTLIGLLLNIVSDITYTLVDPRIDF 362 Query: 356 E 356 E Sbjct: 363 E 363 >STM2217 [R] COG4174 ABC-type uncharacterized transport system, permease component Sty Salmonella typhimurium LT2 Length = 364 Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust. Identities = 191/360 (53%), Positives = 268/360 (74%), Gaps = 12/360 (3%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMK-GRGGG--GEASGGGAASG 65 +Y+++R+LL+IPTL+ ++ I F ++Q PGGPV+QA+ ++ G+GG G + G AS Sbjct: 3 AYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGQGGALPGASGEGVRASH 62 Query: 66 A---------SAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHH 116 A S YRG +G+D + IAEI YGFDKP ER++ ML+ +L+FD G S + Sbjct: 63 AQTGVGNISDSHYRGGRGLDPEVIAEITHRYGFDKPLHERYFKMLRDYLSFDFGDSLFRS 122 Query: 117 GDVWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPG 176 V TL+K LPVSI++GLW+ L+ YL+S+PLGI KAV G+RFD ++ +++GY+IP Sbjct: 123 ASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVHNGSRFDVWSSAFIIIGYAIPA 182 Query: 177 FVLGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAV 236 F+ + L+V FAGGS+ FPLRGL S N+++L KITDYLWHITLPV A+VIG FA Sbjct: 183 FLFAILLIVFFAGGSYYDIFPLRGLVSANFDTLPWYQKITDYLWHITLPVLATVIGGFAA 242 Query: 237 ITMLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGS 296 +TMLT+N+FL+E+RKQYV+TARAKG+SE+ +L+KHVFRNA++ ++ GFP+ FI+ FF GS Sbjct: 243 LTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFTGS 302 Query: 297 LLIETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 356 LLIE +FSL+G+GLL YE+ + RDYPV+ GTLY+FTLIGL++ ++ D+ Y DPR+ FE Sbjct: 303 LLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNILSDISYTLVDPRIDFE 362 >yejB [R] COG4174 ABC-type uncharacterized transport system, permease component Eco Escherichia coli K12 Length = 364 Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust. Identities = 190/360 (52%), Positives = 262/360 (72%), Gaps = 12/360 (3%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMK--------GRGGGG----E 56 +Y+++R+LL+IPTL+ ++ I F ++Q PGGPV+QA+ ++ G GG G Sbjct: 3 AYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGVRASH 62 Query: 57 ASGGGAASGASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHH 116 A G S YRG +G+D + IAEI YGFDKP ER++ ML ++ FD G S + Sbjct: 63 AQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYIRFDFGDSLFRS 122 Query: 117 GDVWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPG 176 V TL+K LPVSI++GLW+ L+ YL+S+PLGI KAV G+RFD ++ +++GY+IP Sbjct: 123 ASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSSAFIIIGYAIPA 182 Query: 177 FVLGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAV 236 F+ + L+V FAGGS+ FPLRGL S N++SL KITDYLWHITLPV A+VIG FA Sbjct: 183 FLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQKITDYLWHITLPVLATVIGGFAA 242 Query: 237 ITMLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGS 296 +TMLT+N+FL+E+RKQYV+TARAKG+SE+ +L+KHVFRNA++ ++ GFP+ FI+ FF GS Sbjct: 243 LTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFTGS 302 Query: 297 LLIETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 356 LLIE +FSL+G+GLL YE+ + RDYPV+ GTLY+FTLIGL++ +V D+ Y DPR+ FE Sbjct: 303 LLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRIDFE 362