BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0013.p         (251 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC3256 Non COG                                                        117   3e-26
SMb20528 Non COG                                                       78   1e-14

>CC3256 Non COG
          Length = 254

 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 107/221 (48%), Gaps = 12/221 (5%)

Query: 35  FAVYRNTIFKGCVDALVANYPTVHRLVGSTWMESAALQFARHHLPRQASLIGYGEGFAGF 94
             VYRNTI KGCVDAL  N+PTV  LVG  W   AAL F++   P  A+L+ YG  F  +
Sbjct: 35  LGVYRNTIAKGCVDALAENFPTVRALVGEEWFTGAALLFSQQSPPTHAALLDYGADFPSW 94

Query: 95  LRTVEAVSELPYLPGVAALDRCWTESHLAADQPMLAVAALHIALEAG--QDVTLVPHASS 152
           L       ELPYL GVA LDR W E+  AA+ P L  A L  +L +G      L PH S 
Sbjct: 95  LERFPPAGELPYLAGVAHLDRLWIEALFAAEAPHLQAATLS-SLSSGALAAARLDPHPSL 153

Query: 153 RW-HHDMQHPVYTIWSANRREDGQAEL--APEWRGEGALLTRPHAQVQWQPLSLGACRFL 209
           R    D   P   +W A R  D   EL  AP    +  +L R    V  + L      FL
Sbjct: 154 RMATFDAGLP--GLWLAARAGDETLELSEAP----QTLMLIRRAGSVTSRLLGEAEAAFL 207

Query: 210 DACRDGCSIARAAGQALEHEPDLDIATMLGQLIQADAFTSF 250
            A R G  +  AA  A E + +  IAT+   LI    FT+ 
Sbjct: 208 HAVRHGEPLGVAAEHAAEADRETPIATLFASLIADGVFTNL 248


>SMb20528 Non COG
          Length = 266

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 3/216 (1%)

Query: 35  FAVYRNTIFKGCVDALVANYPTVHRLVGSTWMESAALQFARHHLPRQASLIGYGEGFAGF 94
           FAVYRN +    ++AL A +P   R+ G  +  + A    R   P+   L  YG  F  F
Sbjct: 48  FAVYRNNVTVSLIEALAATFPATRRITGDAFFRAMARFHIREVPPKSPLLFEYGRDFPDF 107

Query: 95  LRTVEAVSELPYLPGVAALDRCWTESHLAADQPMLAVAALHIALEAG-QDVTLVPHASSR 153
           +        +P+L  +A ++R W +++ AAD   L    L  A      ++   PH ++ 
Sbjct: 108 IERYAYARPMPWLADIARIERAWLDAYHAADAAALLPHVLATAKPTELANLVFEPHPATG 167

Query: 154 WHHDMQHPVYTIWSANRREDGQAELAPEWRGEGALLTRPHAQVQWQPLSLGACRFLDACR 213
                 +P  T++ AN R DG          E AL+TRP  +V+ + LS G   F+ +  
Sbjct: 168 VVRS-AYPAVTVFLAN-RGDGPVGRIEASVPETALITRPSLEVEVRALSRGIDIFVGSLL 225

Query: 214 DGCSIARAAGQALEHEPDLDIATMLGQLIQADAFTS 249
           +G    RAA       P+ D+AT +  +++A AF +
Sbjct: 226 EGEPFGRAAVAGHACCPNFDLATAIRVMLEAGAFAA 261