BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0112.p (280 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll8315 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase com... 260 3e-69 AGl3258 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase com... 240 2e-63 NMB0588 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase com... 232 8e-61 NMA0791 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase com... 231 9e-61 SP1648 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase comp... 166 8e-41 CT068 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase compo... 164 2e-40 TP0164 Non COG 159 6e-39 FN0669 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase comp... 159 9e-39 lin1963 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase com... 158 1e-38 CPn0348 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase com... 157 2e-38 >mll8315 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component Mlo Mesorhizobium loti Length = 272 Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 128/238 (53%), Positives = 167/238 (70%), Gaps = 1/238 (0%) Query: 5 ISLENLTVSYRRHPALHHVNGAFERGSLTAVVGPNGAGKSTLLKSMLGLVRCNDGRVLTH 64 ++ +LT+ Y HPA+HH++G +GSLTAVVG NG+GKSTL+K ++G+++ G V+ Sbjct: 6 LTFRDLTLGYNSHPAIHHLDGTIRKGSLTAVVGANGSGKSTLMKGIVGVLKPMAGEVV-R 64 Query: 65 VDARRIAYLPQQAEIDRSFPISVLDCVLLGYWQAKGNWGGIDAAMCARARQALAAVGLDG 124 R AYLPQQ+E+DRSFP V+D V LG W +G G + A QAL AVGL G Sbjct: 65 APGVRAAYLPQQSELDRSFPARVVDLVSLGLWPKRGMLGRYTSEDRAAVSQALMAVGLGG 124 Query: 125 FSGRPVASLSVGQFQRVLFARILLQDAEVILLDEPFNAIDARTTGDLLRIISAWHAERRT 184 F RP+ +LS GQ QR LFAR+LLQDA++ILLDEPFNA+DA+T GDL+ +I WH E RT Sbjct: 125 FEKRPIDTLSGGQLQRTLFARVLLQDADLILLDEPFNAVDAKTVGDLIALIKRWHGEERT 184 Query: 185 VIAVLHDHDQVRRAFPQTLLLARHVVAWGQTAEVMCEENLQRARAMAEAVDEQAGVCE 242 ++ V+HD D VR+ FP+TLLLAR +AWG+T E + ENL RAR EA +E A CE Sbjct: 185 IMVVVHDLDLVRQNFPETLLLARQPIAWGETRETLKPENLLRARRFHEAWEENAPWCE 242 >AGl3258 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 277 Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 135/279 (48%), Positives = 179/279 (64%), Gaps = 12/279 (4%) Query: 2 NAAISLENLTVSYRRHPALHHVNGAFERGSLTAVVGPNGAGKSTLLKSMLGLVRCNDG-- 59 + ++ NLT+ Y A+HH++GA RGSLTAVVG NG+GKSTL+K + G+++ G Sbjct: 3 DPCLTFTNLTLGYAGRAAVHHLDGAIARGSLTAVVGANGSGKSTLMKGIAGILKPLGGEC 62 Query: 60 RVLTHVDARRIAYLPQQAEIDRSFPISVLDCVLLGYWQAKGNWGGIDAAMCARARQALAA 119 R+ + + +AYLPQQ+E+DRSFP V D V LG W +G G + A + + A Sbjct: 63 RISSGIS---VAYLPQQSELDRSFPAQVRDLVALGLWPKRGLLGRHLSQDKAAMGRVMEA 119 Query: 120 VGLDGFSGRPVASLSVGQFQRVLFARILLQDAEVILLDEPFNAIDARTTGDLLRIISAWH 179 VGL GF R + SLS GQ QR LFAR +LQDA++ILLDEPFNA+D RT DLL +I AW Sbjct: 120 VGLSGFEKRNIDSLSGGQMQRALFARAMLQDAQLILLDEPFNAVDERTVTDLLMLIKAWV 179 Query: 180 AERRTVIAVLHDHDQVRRAFPQTLLLARHVVAWGQTAEVMCEENLQRARAMAEAVDEQAG 239 AE RTV+AVLHDH VR+ FPQTL LAR +V G TA+V+ EN+Q+AR EA E A Sbjct: 180 AEGRTVLAVLHDHQLVRQHFPQTLFLARRLVGLGATADVLKAENMQQARHFHEAWAENAP 239 Query: 240 VCEVSEADVLALSQPHD----HVHAHLHAHEPTHEHAHA 274 C +A +++P D H H H P+H +++A Sbjct: 240 WCGPGDA---PMTEPLDAGPRTASVHSHPHSPSHANSNA 275 >NMB0588 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component Nme Neisseria meningitidis MC58 Length = 251 Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 119/227 (52%), Positives = 157/227 (69%), Gaps = 1/227 (0%) Query: 4 AISLENLTVSYRRHPALHHVNGAFERGSLTAVVGPNGAGKSTLLKSMLGLVRCNDGRV-L 62 +I +ENLTVSYRR PA+HHV+ FE S+ AV GPNGAGKST LKS++GL + G + L Sbjct: 12 SIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTFLKSLMGLQPIDTGSIRL 71 Query: 63 THVDARRIAYLPQQAEIDRSFPISVLDCVLLGYWQAKGNWGGIDAAMCARARQALAAVGL 122 + + IAYLPQQ++IDRS P++V D +G W G + GI+ A R +AL VG+ Sbjct: 72 DGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFKGINTAQKQRVHEALERVGM 131 Query: 123 DGFSGRPVASLSVGQFQRVLFARILLQDAEVILLDEPFNAIDARTTGDLLRIISAWHAER 182 F+ R +A LS GQFQRVLFAR+L+Q+A+ +LLDEPFNA+DARTT +LL ++ H Sbjct: 132 QRFADRQIAYLSNGQFQRVLFARMLVQNAKFLLLDEPFNAVDARTTYELLDVLQKCHCGG 191 Query: 183 RTVIAVLHDHDQVRRAFPQTLLLARHVVAWGQTAEVMCEENLQRARA 229 +IAVLHD++QVR FP TLLLAR +A G T ++ E L +A A Sbjct: 192 HAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETILTEPYLAQANA 238 >NMA0791 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component NmA Neisseria meningitidis Z2491 Length = 251 Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 119/227 (52%), Positives = 158/227 (69%), Gaps = 1/227 (0%) Query: 4 AISLENLTVSYRRHPALHHVNGAFERGSLTAVVGPNGAGKSTLLKSMLGLVRCNDGRV-L 62 +I +ENLTVSYRR PA+HHV+ FE S+ AV GPNGAGKST LKS++GL + G + L Sbjct: 12 SIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTFLKSLMGLQPIDTGSIRL 71 Query: 63 THVDARRIAYLPQQAEIDRSFPISVLDCVLLGYWQAKGNWGGIDAAMCARARQALAAVGL 122 + + IAYLPQQ++IDRS P++V D +G W G + GI+A R ++L VG+ Sbjct: 72 DGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFRGINAVKKQRVHESLERVGM 131 Query: 123 DGFSGRPVASLSVGQFQRVLFARILLQDAEVILLDEPFNAIDARTTGDLLRIISAWHAER 182 F+GR +A LS GQFQRVLFAR+L+Q+A+ +LLDEPFNA+DARTT +LL ++ H Sbjct: 132 RQFAGRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFNAVDARTTYELLDVLQKCHCGG 191 Query: 183 RTVIAVLHDHDQVRRAFPQTLLLARHVVAWGQTAEVMCEENLQRARA 229 +IAVLHD++QVR FP TLLLAR +A G T ++ E L +A A Sbjct: 192 HAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETILTEPYLAQANA 238 >SP1648 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component Spn Streptococcus pneumoniae TIGR4 Length = 240 Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 90/227 (39%), Positives = 134/227 (59%), Gaps = 4/227 (1%) Query: 5 ISLENLTVSYRRHPALHHVNGAFERGSLTAVVGPNGAGKSTLLKSMLGLVRCNDGRVLTH 64 I +ENL+VSY+ AL ++ ++T ++GPNGAGKSTLLK MLG++ L Sbjct: 2 IRIENLSVSYKETLALKDISLVLHGPTITGIIGPNGAGKSTLLKGMLGIIPHQGQAFLDD 61 Query: 65 VDAR----RIAYLPQQAEIDRSFPISVLDCVLLGYWQAKGNWGGIDAAMCARARQALAAV 120 + + RIAY+ Q+ ID +FPI V +CV LG + + + + A + ++AL V Sbjct: 62 KEVKKSLHRIAYVEQKINIDYNFPIKVKECVSLGLFPSIPLFRSLKAKHWKKVQEALEIV 121 Query: 121 GLDGFSGRPVASLSVGQFQRVLFARILLQDAEVILLDEPFNAIDARTTGDLLRIISAWHA 180 GL ++ R ++ LS GQFQRVL AR L+Q+A+ ILLDEPF ID+ + ++ + Sbjct: 122 GLADYAERQISQLSGGQFQRVLIARCLVQEADYILLDEPFAGIDSVSEEIIMNTLRDLKK 181 Query: 181 ERRTVIAVLHDHDQVRRAFPQTLLLARHVVAWGQTAEVMCEENLQRA 227 +TV+ V HD ++ F Q LL+ R V+A+G T E E NL+ A Sbjct: 182 AGKTVLIVHHDLSKIPHYFDQVLLVNREVIAFGPTKETFTETNLKEA 228 >CT068 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component Ctr Chlamydia trachomatis Length = 259 Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 88/229 (38%), Positives = 135/229 (58%), Gaps = 5/229 (2%) Query: 4 AISLENLTVSYRRHPALHHVNGAFERGSLTAVVGPNGAGKSTLLKSMLGLVRCNDGRVLT 63 A S+E+L V+Y L H+ + G++ A++GPNGAGKSTLLK+ LGL+R + G+ L Sbjct: 8 AWSVEDLCVNYDHSDVLCHITFSLPAGAMAAIIGPNGAGKSTLLKASLGLIRASSGQSLF 67 Query: 64 HVDA-----RRIAYLPQQAEIDRSFPISVLDCVLLGYWQAKGNWGGIDAAMCARARQALA 118 RIAY+PQ+A +D FP++VLD VL+G + KG W I A + L Sbjct: 68 FGQRFSKVHHRIAYMPQRASVDWDFPMTVLDLVLMGCYGYKGIWNRISTDDRQEAMRILE 127 Query: 119 AVGLDGFSGRPVASLSVGQFQRVLFARILLQDAEVILLDEPFNAIDARTTGDLLRIISAW 178 VGL+ F+ R + LS GQ QR AR L+Q A++ L+DE F+AID + ++ ++ Sbjct: 128 RVGLEAFANRQIGKLSGGQQQRAFLARSLMQKADLYLMDELFSAIDMASYQMVVDVLQEL 187 Query: 179 HAERRTVIAVLHDHDQVRRAFPQTLLLARHVVAWGQTAEVMCEENLQRA 227 +E +T++ + HD VR+ F +LL +H+V G E + +E + +A Sbjct: 188 KSEGKTIVVIHHDLSNVRKLFDHVILLNKHLVCSGSVEECLTKEAIFQA 236 >TP0164 Non COG Length = 266 Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 87/229 (37%), Positives = 132/229 (57%), Gaps = 5/229 (2%) Query: 4 AISLENLTVSYRRHPALHHVNGAFERGSLTAVVGPNGAGKSTLLKSMLGLVRCNDGRVLT 63 A+ +++LT++YR+ P L V+ G + A++GPNGAGKSTLLK+++GL+ G V Sbjct: 10 AVQVDDLTLAYRQKPVLWDVDVRIPEGVIEAIIGPNGAGKSTLLKAIMGLLPLASGEVRV 69 Query: 64 H-----VDARRIAYLPQQAEIDRSFPISVLDCVLLGYWQAKGNWGGIDAAMCARARQALA 118 + RR+AY+PQ++ +D FP +V D VL+G + + G ARAR+A+ Sbjct: 70 FGRPFSKERRRVAYVPQRSAVDWDFPTTVFDVVLMGSYGSLGWILRPGKREKARAREAIE 129 Query: 119 AVGLDGFSGRPVASLSVGQFQRVLFARILLQDAEVILLDEPFNAIDARTTGDLLRIISAW 178 VG+ F R ++ LS GQ QRV AR L+QDA++ +DEPF +DA T ++ ++ Sbjct: 130 EVGMGAFLDRQISELSGGQQQRVFLARALVQDADLYFMDEPFQGVDAATEQAIVTLLKTL 189 Query: 179 HAERRTVIAVLHDHDQVRRAFPQTLLLARHVVAWGQTAEVMCEENLQRA 227 +T++ V HD V F + LLL V+A G EE +QRA Sbjct: 190 KGRGKTLLVVHHDLQTVAEYFDRVLLLNVRVIAEGAVVSAFTEEYVQRA 238 >FN0669 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component Fnu Fusobacterium nucleatum Length = 227 Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 133/227 (58%), Gaps = 3/227 (1%) Query: 1 MNAAISLENLTVSYRRHPALHHVNGAFERGSLTAVVGPNGAGKSTLLKSMLGLVRCNDGR 60 MNA I + NLTV+Y + AL ++N E GSL A+VGPNGAGKSTL+K++L ++ G Sbjct: 1 MNA-IEIRNLTVAYGENIALENLNLDVEVGSLMALVGPNGAGKSTLIKTILKFLKQITGE 59 Query: 61 VLTHVDARRIAYLPQQAEIDRSFPISVLDCVLLGYWQAKGNWGGIDAAMCARARQALAAV 120 + ++ + +AY+PQ+ +D FP ++ D V +G + G + ++ + +A+ V Sbjct: 60 I--KINGKTLAYVPQRNSVDWDFPTTLFDVVEMGCYGRVGLFKRVNKEEKQKVLKAIEQV 117 Query: 121 GLDGFSGRPVASLSVGQFQRVLFARILLQDAEVILLDEPFNAIDARTTGDLLRIISAWHA 180 G+ F R ++ LS GQ QR AR L+Q+A++ L+DEPF +D+ T ++ I+ + Sbjct: 118 GMLDFKDRQISELSGGQQQRTFIARALVQEADIYLMDEPFQGVDSTTEKSIVNILKKLKS 177 Query: 181 ERRTVIAVLHDHDQVRRAFPQTLLLARHVVAWGQTAEVMCEENLQRA 227 E +T+I V HD V F + + V+A G+ E+ +EN+ + Sbjct: 178 EGKTLIIVHHDLQTVPTYFESVTFINKTVIASGKVKEIYTQENIDKT 224 >lin1963 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component Lin Listeria innocua Length = 240 Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 89/229 (38%), Positives = 129/229 (56%), Gaps = 7/229 (3%) Query: 5 ISLENLTVSYRRHPALHHVNGAFERGSLTAVVGPNGAGKSTLLKSMLGLVRCNDGRV--- 61 ++++ LT++Y++ A+ V G LT +VGPNGAGKSTLLK M+GLV G+V Sbjct: 1 MNIQGLTIAYKQKVAIDDVTLQIATGKLTGIVGPNGAGKSTLLKGMMGLVPREKGQVTLD 60 Query: 62 ---LTHVDARRIAYLPQQAEIDRSFPISVLDCVLLGYWQAKGNWGGIDAAMCARARQALA 118 LT+ ++IAY+PQ++E+D +FPI+V D VLLG + A G A AL Sbjct: 61 NKPLTYW-RKKIAYVPQRSEVDLTFPITVFDMVLLGTYPALGLIKRPGKKEKQLAFDALE 119 Query: 119 AVGLDGFSGRPVASLSVGQFQRVLFARILLQDAEVILLDEPFNAIDARTTGDLLRIISAW 178 V + FS R + LS GQ QRV AR L Q AE+ LDEPF ID + +++++ Sbjct: 120 QVEMTAFSKRQIGELSGGQLQRVFIARALAQHAEIFFLDEPFAGIDMASEALIMKLLKKL 179 Query: 179 HAERRTVIAVLHDHDQVRRAFPQTLLLARHVVAWGQTAEVMCEENLQRA 227 +T++ V HD +V F +LL + +VA G + EE +Q A Sbjct: 180 RDNGKTIVVVHHDFHKVAAYFDDIILLNKKLVAHGPVEQTFTEEKIQFA 228 >CPn0348 [P] COG1121 ABC-type Mn/Zn transport systems, ATPase component Cpn Chlamydophila pneumoniae CWL029 Length = 259 Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 85/219 (38%), Positives = 129/219 (58%), Gaps = 5/219 (2%) Query: 6 SLENLTVSYRRHPALHHVNGAFERGSLTAVVGPNGAGKSTLLKSMLGLVRCNDGRVLTHV 65 S+ NL V+Y L+H++ + +GSLTA++GPNGAGKSTLLK+ LGL++ + G V Sbjct: 10 SVHNLCVNYEHAAVLYHISFSLGKGSLTAILGPNGAGKSTLLKASLGLIKPSSGTVYFFN 69 Query: 66 DA-----RRIAYLPQQAEIDRSFPISVLDCVLLGYWQAKGNWGGIDAAMCARARQALAAV 120 +RIAY+PQ+A +D FP++VLD L+G + KG WG I + A L V Sbjct: 70 QKFKKVRQRIAYMPQRASVDWDFPMTVLDLALMGCYSYKGMWGRISSDDRREAFHILERV 129 Query: 121 GLDGFSGRPVASLSVGQFQRVLFARILLQDAEVILLDEPFNAIDARTTGDLLRIISAWHA 180 GL+ + R + LS GQ QR AR L+Q A++ L+DE F+AID + + ++ Sbjct: 130 GLESVADRQIGQLSGGQQQRAFLARALMQKADLYLMDELFSAIDMASFKTSVGVLQELRD 189 Query: 181 ERRTVIAVLHDHDQVRRAFPQTLLLARHVVAWGQTAEVM 219 + +T++ V HD VR+ F +LL + ++ G T E + Sbjct: 190 QGKTIVVVHHDLSHVRQLFDHVVLLNKRLICCGPTDECL 228