BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0088.p (171 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1023 [O] COG1076 DnaJ-domain-containing proteins 1 Rso Ralsto... 171 6e-43 NMB1383 [O] COG1076 DnaJ-domain-containing proteins 1 Nme Neisse... 129 3e-30 NMA1598 [O] COG1076 DnaJ-domain-containing proteins 1 NmA Neisse... 127 2e-29 hscB [O] COG1076 DnaJ-domain-containing proteins 1 Eco Escherich... 117 1e-26 ECs3393 [O] COG1076 DnaJ-domain-containing proteins 1 Ecs Escher... 117 1e-26 ZyfhE [O] COG1076 DnaJ-domain-containing proteins 1 EcZ Escheric... 115 3e-26 VC0751 [O] COG1076 DnaJ-domain-containing proteins 1 Vch Vibrio ... 113 3e-25 YPO2893 [O] COG1076 DnaJ-domain-containing proteins 1 Ype Yersin... 107 1e-23 STM2540 [O] COG1076 DnaJ-domain-containing proteins 1 Sty Salmon... 105 5e-23 PA3811 [O] COG1076 DnaJ-domain-containing proteins 1 Pae Pseudom... 92 8e-19 >RSc1023 [O] COG1076 DnaJ-domain-containing proteins 1 Rso Ralstonia solanacearum Length = 176 Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 99/165 (60%), Positives = 121/165 (73%), Gaps = 1/165 (0%) Query: 3 NHYDLFQLPQRFAIDLKALEQAFHRVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQTL 62 H+ LF LP+ F +D AL A+ VQS+AHPD+ AHASDAE+RVAMQWATRANEAYQTL Sbjct: 7 THFSLFGLPEHFEVDDGALNAAYRTVQSRAHPDRHAHASDAERRVAMQWATRANEAYQTL 66 Query: 63 KHPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWRETLDDAKAAKDIDALEQLNAEL 122 + PLKRA YL L GVD+Q E+NTAM PAFLMQQ+EWRE+L DAKAA D+DAL+ L A L Sbjct: 67 RDPLKRATYLLHLRGVDVQAENNTAMPPAFLMQQLEWRESLADAKAAGDLDALDDLLAML 126 Query: 123 LAEKKAEIGRIEALLDTGDY-AAAGKLVRQLMFLDKFGAEIGDAF 166 EK+A + LL+ G + AAA VRQLMF++K + +A Sbjct: 127 RGEKRARYQTLAGLLNGGGHDAAAADAVRQLMFIEKIERDTAEAI 171 >NMB1383 [O] COG1076 DnaJ-domain-containing proteins 1 Nme Neisseria meningitidis MC58 Length = 166 Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 102/165 (61%) Query: 1 MQNHYDLFQLPQRFAIDLKALEQAFHRVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQ 60 M ++ LF++ F ID + LEQ + + ++ HPDKFA AS E++ A+ ++ N+AY+ Sbjct: 1 MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYR 60 Query: 61 TLKHPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWRETLDDAKAAKDIDALEQLNA 120 TLK+P+ RA YL + G+D +TA AP FLMQQMEWRETL +A+A D+++L+ L+ Sbjct: 61 TLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRETLMEARAGNDLESLKNLDN 120 Query: 121 ELLAEKKAEIGRIEALLDTGDYAAAGKLVRQLMFLDKFGAEIGDA 165 E+ E++ ++ DY A + VRQ FLDK EI A Sbjct: 121 EIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRNEISSA 165 >NMA1598 [O] COG1076 DnaJ-domain-containing proteins 1 NmA Neisseria meningitidis Z2491 Length = 166 Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 102/165 (61%) Query: 1 MQNHYDLFQLPQRFAIDLKALEQAFHRVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQ 60 M ++ LF++ F ID + LEQ + + ++ HPDKFA AS E++ A+ ++ N+AY+ Sbjct: 1 MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYR 60 Query: 61 TLKHPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWRETLDDAKAAKDIDALEQLNA 120 TLK+P+ RA YL + G+D +T+ A FLMQQMEWRETL +A+A KD+++L+ L+ Sbjct: 61 TLKNPIDRAAYLLKTSGIDADAPEHTSFASEFLMQQMEWRETLMEARAGKDLESLKNLDN 120 Query: 121 ELLAEKKAEIGRIEALLDTGDYAAAGKLVRQLMFLDKFGAEIGDA 165 E+ E++ ++ DY A + VRQ FLDK EI A Sbjct: 121 EIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRNEISSA 165 >hscB [O] COG1076 DnaJ-domain-containing proteins 1 Eco Escherichia coli K12 Length = 171 Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/161 (43%), Positives = 95/161 (59%), Gaps = 6/161 (3%) Query: 3 NHYDLFQLPQRFAIDLKALEQAFHRVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQTL 62 +++ LF LP R+ +D +AL F +Q Q HPDKFA S AE+ A+Q + N+A+QTL Sbjct: 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61 Query: 63 KHPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWRETLDDAKAAKDIDALEQLNAEL 122 +HPL RA YL LHG DL +E +T AFLM+Q+E RE LD+ + AKD LE + Sbjct: 62 RHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRV 121 Query: 123 LAEKKAEIGRIEAL---LDTGDYAAAGKLVRQLMFLDKFGA 160 KK R + + LD + AA VR+L FLDK + Sbjct: 122 ---KKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRS 159 >ECs3393 [O] COG1076 DnaJ-domain-containing proteins 1 Ecs Escherichia coli O157:H7 Length = 171 Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/161 (43%), Positives = 95/161 (59%), Gaps = 6/161 (3%) Query: 3 NHYDLFQLPQRFAIDLKALEQAFHRVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQTL 62 +++ LF LP R+ +D +AL F +Q Q HPDKFA S AE+ A+Q + N+A+QTL Sbjct: 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61 Query: 63 KHPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWRETLDDAKAAKDIDALEQLNAEL 122 +HPL RA YL LHG DL +E +T AFLM+Q+E RE LD+ + AKD LE + Sbjct: 62 RHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRV 121 Query: 123 LAEKKAEIGRIEAL---LDTGDYAAAGKLVRQLMFLDKFGA 160 KK R + + LD + AA VR+L FLDK + Sbjct: 122 ---KKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRS 159 >ZyfhE [O] COG1076 DnaJ-domain-containing proteins 1 EcZ Escherichia coli O157:H7 EDL933 Length = 171 Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/161 (42%), Positives = 94/161 (58%), Gaps = 6/161 (3%) Query: 3 NHYDLFQLPQRFAIDLKALEQAFHRVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQTL 62 +++ LF LP R+ +D +AL F +Q Q HPDKFA S AE+ A+Q + N+A+QTL Sbjct: 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61 Query: 63 KHPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWRETLDDAKAAKDIDALEQLNAEL 122 +HPL RA YL LHG DL +E +T AFLM+Q+E RE LD+ + AKD LE + Sbjct: 62 RHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRV 121 Query: 123 LAEKKAEIGRIEAL---LDTGDYAAAGKLVRQLMFLDKFGA 160 KK R + + LD + A VR+L FLDK + Sbjct: 122 ---KKMFDTRHQLMVEQLDNETWDAXADTVRKLRFLDKLRS 159 >VC0751 [O] COG1076 DnaJ-domain-containing proteins 1 Vch Vibrio cholerae Length = 171 Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 96/161 (59%), Gaps = 1/161 (0%) Query: 3 NHYDLFQLPQRFAIDLKALEQAFHRVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQTL 62 N+++LF LP +F +D L F +Q + HPD FA AS+ ++ +A+Q A + N+AYQTL Sbjct: 2 NYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTL 61 Query: 63 KHPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWRETLDDAKAAKDID-ALEQLNAE 121 K PL+RA YL L G+++ E T P FLM+QME RE L+ A D + AL + + Sbjct: 62 KDPLRRAEYLLSLQGIEMNAEQQTLQDPMFLMEQMELREELESVTACADPEAALVAFDTK 121 Query: 122 LLAEKKAEIGRIEALLDTGDYAAAGKLVRQLMFLDKFGAEI 162 + A ++ + +++ L ++ AA +R+L F+ K E+ Sbjct: 122 VTAMQRHYLAQLQGQLAQSEWLAAADQIRKLKFIAKLKNEV 162 >YPO2893 [O] COG1076 DnaJ-domain-containing proteins 1 Ype Yersinia pestis Length = 174 Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 88/168 (52%), Gaps = 15/168 (8%) Query: 3 NHYDLFQLPQRFAIDLKALEQAFHRVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQTL 62 +++ LF LP R+ ID L + +Q Q HPD+FA + E+ +MQ A N+AYQTL Sbjct: 2 DYFTLFGLPARYLIDGNQLTTRYQELQRQFHPDRFATQPERERLASMQQAATINDAYQTL 61 Query: 63 KHPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWRETLDDAKAAKDIDALEQLNAEL 122 KHPLKRA Y+ L G DL E +T AFLM+Q+E RE LD + D + L Sbjct: 62 KHPLKRAEYMLSLQGFDLGNEQHTMRDTAFLMEQLELREELDAIERKPDAET-------L 114 Query: 123 LAEKKAEIGRIEAL--------LDTGDYAAAGKLVRQLMFLDKFGAEI 162 LAE + ++ LD + A VR+L FLDK ++ Sbjct: 115 LAEFSRRVAQMTTTRTQQMVEQLDAQLWVQAADTVRKLRFLDKLQQQV 162 >STM2540 [O] COG1076 DnaJ-domain-containing proteins 1 Sty Salmonella typhimurium LT2 Length = 171 Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 94/158 (59%) Query: 3 NHYDLFQLPQRFAIDLKALEQAFHRVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQTL 62 +++ LF LP R+ ID +AL F +Q Q HPDKFA+ + A++ A+Q + N+A+QTL Sbjct: 2 DYFTLFGLPARYQIDTQALSLRFQDLQRQYHPDKFANGTQAQQLAAVQQSATINQAWQTL 61 Query: 63 KHPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWRETLDDAKAAKDIDALEQLNAEL 122 +HPL RA YL LHG DL +E +T AFLM+Q+ RE LDD + +KD LE + Sbjct: 62 RHPLTRAEYLLSLHGFDLASEQHTVRDTAFLMEQLTLREELDDIEQSKDDARLESFIKRV 121 Query: 123 LAEKKAEIGRIEALLDTGDYAAAGKLVRQLMFLDKFGA 160 A + ++ LD + AA VR+L FLDK + Sbjct: 122 QKMFDARLQQMVEQLDNAAWDAAADTVRKLRFLDKLRS 159 >PA3811 [O] COG1076 DnaJ-domain-containing proteins 1 Pae Pseudomonas aeruginosa Length = 173 Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 89/161 (55%), Gaps = 4/161 (2%) Query: 4 HYDLFQLPQRFAIDLKALEQAFHRVQSQAHPDKFAHASDAEKRVAMQWATRANEAYQTLK 63 H+ F L F +DL L Q + + HPD+FA A + E+R+A++ A + NEAYQTLK Sbjct: 6 HFAQFDLQPAFLVDLDELGQRYRELVRSVHPDRFADAPEREQRLALERAAQLNEAYQTLK 65 Query: 64 HPLKRARYLCELHGVDLQTESNTAMAPAFLMQQMEWRETLDDAKAAKDIDALEQLNAELL 123 +RA YL L G +L E+ T P FL+QQM+ RE L++ + + D+ + L Sbjct: 66 SAPRRALYLLTLSGHELPLEA-TVQDPEFLLQQMQLREELEELQDSADLAGVATFKRRLK 124 Query: 124 AEKKAEIGRIEALL--DTGDYAAAGKLVRQLMFLDKFGAEI 162 A +AE+ R A D A +LVR++ FLDK E+ Sbjct: 125 A-AQAELEREFAACWDDAQRREEAERLVRRMQFLDKLAQEV 164