BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0028.p (690 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2381_1 [J] COG0143 Methionyl-tRNA synthetase Rso Ralstonia so... 745 0.0 NMA0275_1 [J] COG0143 Methionyl-tRNA synthetase NmA Neisseria me... 687 0.0 NMB0030_1 [J] COG0143 Methionyl-tRNA synthetase Nme Neisseria me... 680 0.0 PM0303_1 [J] COG0143 Methionyl-tRNA synthetase Pmu Pasteurella m... 630 e-180 HI1276_1 [J] COG0143 Methionyl-tRNA synthetase Hin Haemophilus i... 617 e-176 VC1036_1 [J] COG0143 Methionyl-tRNA synthetase Vch Vibrio cholerae 599 e-171 PA3482_1 [J] COG0143 Methionyl-tRNA synthetase Pae Pseudomonas a... 588 e-167 ECs2920_1 [J] COG0143 Methionyl-tRNA synthetase Ecs Escherichia ... 588 e-167 ZmetG_1 [J] COG0143 Methionyl-tRNA synthetase EcZ Escherichia co... 587 e-167 YPO1522_1 [J] COG0143 Methionyl-tRNA synthetase Ype Yersinia pestis 587 e-167 >RSc2381_1 [J] COG0143 Methionyl-tRNA synthetase Rso Ralstonia solanacearum Length = 574 Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/575 (61%), Positives = 427/575 (74%), Gaps = 8/575 (1%) Query: 7 RQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIAAEK 66 R++ VT+ALPYANG HIGH++EYIQ DIWVRFQRM+G+E ++VGADD HG P+M+ AEK Sbjct: 4 RRILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHETYYVGADDTHGTPVMLRAEK 63 Query: 67 AGITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLISTKT 126 GITP+Q + + K+ D F ++FDN+ STDS EN EL + +Y L+ EA LI + Sbjct: 64 EGITPRQLIERVWTEHKRDFDNFLVSFDNYYSTDSDENRELCERVYLKLK-EAGLIDVRE 122 Query: 127 IDQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSGATPV 186 ++QFYDPVK MFLPDR+IKGECPKCG KDQYGDSCE C A Y PTDLKNPYS +SGATPV Sbjct: 123 VEQFYDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGATYQPTDLKNPYSVVSGATPV 182 Query: 187 MKSSEHFFFKLSDPKCVAFLREWALDSNRLQPEVANKAKEWL--DGEGGLGDWDISRDAP 244 KSSEH+FFKLSDP+C FLR+W D QPE NK +EWL +GE L DWDISRDAP Sbjct: 183 RKSSEHYFFKLSDPRCETFLRDWVGD--LAQPEATNKMREWLGDEGESTLSDWDISRDAP 240 Query: 245 YFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGRNFDAFMADDKT-EQYHFIGKDIT 303 YFG EIP APGKYFYVWLDAP+GY AS KN K G +FDA+++ T EQYHFIGKDI Sbjct: 241 YFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCGKLGLDFDAWVSTHSTAEQYHFIGKDIL 300 Query: 304 YFHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWLRY 363 YFHTLFWPAML+F+G +TP NVFAHGF+TV G KMSKSRGT I+ Y+D G+NPEWLRY Sbjct: 301 YFHTLFWPAMLQFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRY 360 Query: 364 YIAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVSTQWATADD 423 Y AAKLNA +ED+D N DDF+ARVN+DL+GK+VNIASR+AGF+ KRFEGRV+ A + Sbjct: 361 YFAAKLNATMEDLDLNLDDFIARVNSDLVGKFVNIASRSAGFLVKRFEGRVND--AALAN 418 Query: 424 AFLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSARDAQLHE 483 + +LR A +I LYE+REY KALR VME ADA+NAYVD KPW+LAKD A+ +LH Sbjct: 419 PLMVQLREAAPQIADLYEKREYSKALRTVMELADAVNAYVDTEKPWDLAKDEAQRDKLHA 478 Query: 484 VCSRLLEAFRILTIYLKPVLPQLAAQVEAFLQVQPFQWGDVAVPLADGHVINAYSHLMQR 543 CS LEAFR+L +YLKP+LP A++EAFL ++P W + L+ I YSHLM R Sbjct: 479 ACSVALEAFRLLAVYLKPILPSTVARIEAFLNIEPLNWRAIDAQLSSARPIQPYSHLMTR 538 Query: 544 VDPKMLDALFDAPEAPAAAASEAAAAESAIEDLAP 578 VD K +DAL +A A +A A + + P Sbjct: 539 VDKKQVDALLEANRQSLQATVDAVPAANGTPAVEP 573 >NMA0275_1 [J] COG0143 Methionyl-tRNA synthetase NmA Neisseria meningitidis Z2491 Length = 566 Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/559 (57%), Positives = 402/559 (71%), Gaps = 18/559 (3%) Query: 7 RQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIAAEK 66 R++ VT+ALPYANG+ H+GH++E+IQ D+WVRFQ+++GNE H+ ADD HG P+M+AA+K Sbjct: 3 RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECHYCCADDTHGTPVMLAAQK 62 Query: 67 AGITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLISTKT 126 GI P+ +A + GF I +DN+ ST SPEN + SQ+IYRAL+ K I ++ Sbjct: 63 QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGK-IESRV 121 Query: 127 IDQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSGATPV 186 I+Q +DP K MFLPDR++KGECPKC +DQYGD+CE C YSPT+L NPYS +SGA P Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGAKPE 181 Query: 187 MKSSEHFFFKLSDPKCVAFLREWALDSN------RLQPEVANKAKEWLDGEG---GLGDW 237 ++ SEHFFFKL + C FL+ W +N LQ E NK KEWL GEG L DW Sbjct: 182 LRESEHFFFKLGE--CADFLKAWTSGNNPHDGKPHLQAEALNKMKEWL-GEGEETTLSDW 238 Query: 238 DISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGRNFDA-FMADDKTEQYH 296 DISRDAPYFG EIPDAPGKYFYVWLDAP+GY+AS KN + G +FD F AD +TE YH Sbjct: 239 DISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYH 298 Query: 297 FIGKDITYFHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGM 356 FIGKDI YFH LFWPAML F+G + P V+AHGF+TV G+KMSKSRGT I+ YL+ G+ Sbjct: 299 FIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGL 358 Query: 357 NPEWLRYYIAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVST 416 NPEW+RYYIAAKLN+K+ED+D N DF++RVN+DL+GKYVNIA+RA+GFIAKRFEGR+ Sbjct: 359 NPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKD 418 Query: 417 QWATADDAFLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSA 476 AD LAKL ++ I YE REY +ALR +M AD +N YVDANKPWELAK Sbjct: 419 ---VADSELLAKLTAQSEAIAECYESREYARALRDIMALADIVNEYVDANKPWELAKQEG 475 Query: 477 RDAQLHEVCSRLLEAFRILTIYLKPVLPQLAAQVEAFLQVQPFQWGDVAVPLADGHVINA 536 +DA+LHEVCS L+ AF +LT YL PVLPQ AA FL ++ W + L H IN Sbjct: 476 QDARLHEVCSELINAFTMLTAYLAPVLPQTAANAAKFLNLEAITWANTRETLGK-HAINK 534 Query: 537 YSHLMQRVDPKMLDALFDA 555 Y HLMQRV+ K +D L +A Sbjct: 535 YEHLMQRVEQKQVDDLIEA 553 >NMB0030_1 [J] COG0143 Methionyl-tRNA synthetase Nme Neisseria meningitidis MC58 Length = 566 Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/559 (57%), Positives = 399/559 (71%), Gaps = 18/559 (3%) Query: 7 RQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIAAEK 66 R++ VT+ALPYANG+ H+GH++E+IQ D+WVRFQ+++G+ H+ ADD HG P+M+AA+K Sbjct: 3 RKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHACHYCCADDTHGTPVMLAAQK 62 Query: 67 AGITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLISTKT 126 GI P+ +A + GF I +DN+ ST SPEN + SQ+IYRAL+ K I ++ Sbjct: 63 QGIAPEDMIAKVREEHLADFTGFFIGYDNYYSTHSPENKQFSQDIYRALKANGK-IESRV 121 Query: 127 IDQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSGATPV 186 I+Q +DP K MFLPDR++KGECPKC +DQYGD+CE C YSPT+L NPYS +SG P Sbjct: 122 IEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCGTTYSPTELINPYSAVSGTKPE 181 Query: 187 MKSSEHFFFKLSDPKCVAFLREWALDSN------RLQPEVANKAKEWLDGEG---GLGDW 237 ++ SEHFFFKL + C FL+ W +N LQ E NK KEWL GEG L DW Sbjct: 182 LRESEHFFFKLGE--CADFLKAWTSGNNPHDGKPHLQAEALNKMKEWL-GEGEETTLSDW 238 Query: 238 DISRDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGRNFDA-FMADDKTEQYH 296 DISRDAPYFG EIPDAPGKYFYVWLDAP+GY+AS KN + G +FD F AD +TE YH Sbjct: 239 DISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNLCDRIGVDFDEYFKADSQTEMYH 298 Query: 297 FIGKDITYFHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGM 356 FIGKDI YFH LFWPAML F+G + P V+AHGF+TV G+KMSKSRGT I+ YL+ G+ Sbjct: 299 FIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLTVDGQKMSKSRGTFITAKSYLEQGL 358 Query: 357 NPEWLRYYIAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVST 416 NPEW+RYYIAAKLN+K+ED+D N DF++RVN+DL+GKYVNIA+RA+GFIAKRFEGR+ Sbjct: 359 NPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFIAKRFEGRLKD 418 Query: 417 QWATADDAFLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSA 476 AD LAKL ++ I YE REY KALR +M AD +N YVDANKPWELAK Sbjct: 419 ---VADSELLAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKPWELAKQEG 475 Query: 477 RDAQLHEVCSRLLEAFRILTIYLKPVLPQLAAQVEAFLQVQPFQWGDVAVPLADGHVINA 536 +D +LHEVCS L+ AF +LT YL PVLPQ AA FL ++ W + L H IN Sbjct: 476 QDERLHEVCSELINAFTMLTAYLAPVLPQTAANAAKFLNLEAITWANTRDTLGK-HAINK 534 Query: 537 YSHLMQRVDPKMLDALFDA 555 Y HLMQRV+ K +D L +A Sbjct: 535 YEHLMQRVEQKQVDDLIEA 553 >PM0303_1 [J] COG0143 Methionyl-tRNA synthetase Pmu Pasteurella multocida Length = 572 Score = 630 bits (1625), Expect = e-180, Method: Compositional matrix adjust. Identities = 308/555 (55%), Positives = 396/555 (71%), Gaps = 13/555 (2%) Query: 1 MSTSAPRQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPI 60 M+ SA R + VT ALPYANGA H+GH++E+IQADIWVRFQRM+G++VHF+ ADDAHG PI Sbjct: 1 MANSA-RDILVTCALPYANGAIHLGHLLEHIQADIWVRFQRMRGHKVHFICADDAHGTPI 59 Query: 61 MIAAEKAGITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAK 120 M+ A+K GITP+ +A A +GF+I++DN+ ST SPEN L+ E+Y+ LR Sbjct: 60 MLNADKLGITPEALIARSKADHVADFEGFNISYDNYHSTHSPENEALTAEMYKKLRANG- 118 Query: 121 LISTKTIDQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTL 180 I ++TI Q +DP K MFLPDR++KG CPKC +DQYGD+CE CS+ YSPT+L NP S + Sbjct: 119 FIKSRTISQLFDPEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSSTYSPTELINPRSVV 178 Query: 181 SGATPVMKSSEHFFFKLSDPKCVAFLREWALDSNRLQPEVANKAKEWLDGEGGLGDWDIS 240 SGATPV+K SEHFFF L P L+ W + S LQPE+ANK +EW E GL WDIS Sbjct: 179 SGATPVLKESEHFFFDL--PAFEGMLKAW-IKSGSLQPEIANKMQEWF--ESGLQQWDIS 233 Query: 241 RDAPYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGRNFDAFMADDKT-EQYHFIG 299 RDAPYFG +IPD KYFYVWLDAPIGY+AS KN KTG NFD F D + E YHFIG Sbjct: 234 RDAPYFGFKIPDTEDKYFYVWLDAPIGYMASFKNLCDKTGLNFDDFWKKDSSAELYHFIG 293 Query: 300 KDITYFHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPE 359 KDI YFH+LFWPAML + P NVFAHG++TV+G KMSKSRGT I YL + PE Sbjct: 294 KDIVYFHSLFWPAMLDGCDLRKPTNVFAHGYVTVNGVKMSKSRGTFIQASTYLR-HLAPE 352 Query: 360 WLRYYIAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVSTQWA 419 +LRYY AAKLN ++ED+D N +DFV R+NAD++ K+VN+ASR+AGFI KRF+G++S + Sbjct: 353 YLRYYYAAKLNNRIEDLDLNLEDFVQRLNADVVNKFVNLASRSAGFITKRFDGKLSAE-- 410 Query: 420 TADDAFLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSARDA 479 A+ LA+ A +I + YE+RE+GK +R VM+ AD N Y+D PW +AK+ R+A Sbjct: 411 IAEPELLAEFVEKAAQIATYYEEREFGKVVREVMQLADKANKYIDDKAPWVMAKEEGREA 470 Query: 480 QLHEVCSRLLEAFRILTIYLKPVLPQLAAQVEAFLQVQPFQWGDVAVPLADGHVINAYSH 539 +L VCS L+ FR+L IYLKPV+PQ+ A+ EAFLQ + W + PL + H I + Sbjct: 471 ELQAVCSMALQLFRVLAIYLKPVIPQIIARAEAFLQDE-LTWESLNRPLLN-HAILPFKA 528 Query: 540 LMQRVDPKMLDALFD 554 L QR+DPK ++A+ + Sbjct: 529 LAQRLDPKQIEAIVN 543 >HI1276_1 [J] COG0143 Methionyl-tRNA synthetase Hin Haemophilus influenzae Length = 572 Score = 617 bits (1590), Expect = e-176, Method: Compositional matrix adjust. Identities = 297/553 (53%), Positives = 387/553 (69%), Gaps = 12/553 (2%) Query: 3 TSAPRQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMI 62 T+ PR++ VT ALPYANGA H+GH++E+IQADIWVRFQRM+GN++HFV ADDAHG PIM+ Sbjct: 2 TTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFVCADDAHGTPIML 61 Query: 63 AAEKAGITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLI 122 A+K GITP++ +A A + GF+I+FDN+ ST S EN +L+ EIY L+ I Sbjct: 62 NADKLGITPEELIAKAKADHIRDFAGFNISFDNYHSTHSEENKQLTAEIYNKLKANG-FI 120 Query: 123 STKTIDQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSG 182 +K I Q +DP KNMFLPDR++KG CPKC +DQYGD+CE C++ YSP DL NP S +SG Sbjct: 121 KSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSG 180 Query: 183 ATPVMKSSEHFFFKLSDPKCVAFLREWALDSNRLQPEVANKAKEWLDGEGGLGDWDISRD 242 TP++K SEHFFF L P L+EW S LQ E+ANK +EW E L WDISRD Sbjct: 181 TTPIVKESEHFFFDL--PAFEGMLKEWT-RSGSLQSEIANKMQEWF--ESDLQQWDISRD 235 Query: 243 APYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGRNFDAFMAD-DKTEQYHFIGKD 301 APYFG EIP A K+FYVWLDAPIGY+AS KN + G +F+ F A+ E YHFIGKD Sbjct: 236 APYFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCNREGIDFNEFWAEGSDAELYHFIGKD 295 Query: 302 ITYFHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWL 361 I YFH+LFWPAML+ +G + P NVFAHG++TV G KMSKSRGT I YL+ ++PE L Sbjct: 296 IVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTFIQASTYLN-HIDPECL 354 Query: 362 RYYIAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVSTQWATA 421 RYY AAKLN ++ED+DFN +DFV RVN D++ K VN+ASR AGFIAKRFEG+++ + Sbjct: 355 RYYYAAKLNDRIEDLDFNLEDFVQRVNTDIVNKLVNLASRNAGFIAKRFEGKLADK--LE 412 Query: 422 DDAFLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSARDAQL 481 D + A+ A++I + YE REY K +R +M D N Y+D PW +AK+ ++A+L Sbjct: 413 DKSLFAEFTAQAEQIAAYYESREYNKTIREIMALTDKANKYIDEKAPWVIAKEEGKEAEL 472 Query: 482 HEVCSRLLEAFRILTIYLKPVLPQLAAQVEAFLQVQPFQWGDVAVPLADGHVINAYSHLM 541 VCS +E FR+L YLKPVLP+LA + E FLQ + +W ++ PL GH + + L Sbjct: 473 QAVCSMGIELFRVLMSYLKPVLPKLAERAETFLQAE-LRWDNIHQPLL-GHTLAPFKALF 530 Query: 542 QRVDPKMLDALFD 554 R++ K +DA+ + Sbjct: 531 SRLEKKQIDAVVE 543 >VC1036_1 [J] COG0143 Methionyl-tRNA synthetase Vch Vibrio cholerae Length = 622 Score = 599 bits (1545), Expect = e-171, Method: Compositional matrix adjust. Identities = 290/549 (52%), Positives = 380/549 (69%), Gaps = 13/549 (2%) Query: 6 PRQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIAAE 65 PR+L VT ALPYANG+ H+GH++E+IQADIWVR+QR++GN V+F+ ADDAHG PIM+ A+ Sbjct: 53 PRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIMLKAQ 112 Query: 66 KAGITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLISTK 125 + G+TP+ + ++ ++ GF I+FDN+ ST S EN EL+ IY L+ IS++ Sbjct: 113 QMGMTPEAMIEMVSEEHQRDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNG-FISSR 171 Query: 126 TIDQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSGATP 185 TI Q +DP K MFLPDR++KG CPKC ++DQYGD+C+ C YSPT+L NP S +SGATP Sbjct: 172 TISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATP 231 Query: 186 VMKSSEHFFFKLSDPKCVAFLREWALDSNRLQPEVANKAKEWLDGEGGLGDWDISRDAPY 245 VMK SEHFFF L P+ + L+EW S LQ E ANK +EW EGGL WDISRDAPY Sbjct: 232 VMKDSEHFFFDL--PQFESMLKEWT-RSGSLQSETANKMQEWF--EGGLQQWDISRDAPY 286 Query: 246 FGIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGR-NFDAFM-ADDKTEQYHFIGKDIT 303 FG EIP K+FYVWLDAPIGY+ S KN K G +F+ + D KTE YHFIGKDI Sbjct: 287 FGFEIPGEKDKFFYVWLDAPIGYMGSFKNLCDKRGDLDFNEYWNKDSKTELYHFIGKDIV 346 Query: 304 YFHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWLRY 363 YFH+LFWPAML +G + P NVF HG++TV+G KMSKS+GT + YL+ ++PE LRY Sbjct: 347 YFHSLFWPAMLDGSGFRKPTNVFVHGYVTVNGAKMSKSKGTFVKASTYLN-HLDPECLRY 405 Query: 364 YIAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVSTQWATADD 423 Y AAKLN +++D+D N +DF RVNAD++ K VN+ASR AGFI KRF+G++S +A + Sbjct: 406 YYAAKLNNRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSAHFAEPE- 464 Query: 424 AFLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSARDAQLHE 483 A+ G AD I L+E RE+G+A+R + AD N YVD PW +AK +D L + Sbjct: 465 -LYAEFAGAADRIAELFEAREFGRAIREITALADKANQYVDEKAPWVVAKQEGQDQALQD 523 Query: 484 VCSRLLEAFRILTIYLKPVLPQLAAQVEAFLQVQPFQWGDVAVPLADGHVINAYSHLMQR 543 +C+ + FR+L YLKPV+P LA + EAFL Q W VA PL D H + + L R Sbjct: 524 ICTVGINLFRVLMTYLKPVMPALAERTEAFLN-QELTWEGVATPLTD-HAVTPFKALFNR 581 Query: 544 VDPKMLDAL 552 +DPK ++A+ Sbjct: 582 IDPKQVEAM 590 >PA3482_1 [J] COG0143 Methionyl-tRNA synthetase Pae Pseudomonas aeruginosa Length = 578 Score = 588 bits (1517), Expect = e-167, Method: Compositional matrix adjust. Identities = 310/588 (52%), Positives = 390/588 (66%), Gaps = 17/588 (2%) Query: 4 SAPRQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIA 63 S PR++ VT+ALPYANG+ H+GH++EYIQ D+WVRFQ+M+GN+ +V ADDAHG+ IM+ Sbjct: 2 SEPRKILVTSALPYANGSIHLGHMLEYIQTDMWVRFQKMRGNQAVYVCADDAHGSAIMLR 61 Query: 64 AEKAGITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLIS 123 AE+ GIT +Q + + A F + FDN+ ST S EN ELS IY LRD A I Sbjct: 62 AEREGITSEQLIDAVRAEHMGDFADFLVDFDNYHSTHSEENRELSSAIYLKLRD-AGHID 120 Query: 124 TKTIDQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSGA 183 T+ + Q++DP K MFL DR+IKG CPKCGT DQYGD+CE C A Y+PT+LK+P S +SGA Sbjct: 121 TRPVTQYFDPEKQMFLADRFIKGTCPKCGTADQYGDNCEACGATYAPTELKDPKSAISGA 180 Query: 184 TPVMKSSEHFFFKLSDPKCVAFLREWALDSNRLQPEVANKAKEWLDGEGGLGDWDISRDA 243 TPV+K S H+FFKL P A L++W S LQ VANK EWLD GL WDISRDA Sbjct: 181 TPVLKESLHYFFKL--PDFEAMLKQWT-RSGALQESVANKLAEWLD--SGLQQWDISRDA 235 Query: 244 PYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGR-NFDAFMADDK-TEQYHFIGKD 301 PYFG EIPDAPGKYFYVWLDAPIGY+AS KN A+ +FDAF D E YHFIGKD Sbjct: 236 PYFGFEIPDAPGKYFYVWLDAPIGYMASFKNLCARRPELDFDAFWGKDSGAELYHFIGKD 295 Query: 302 ITYFHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWL 361 I FH LFWPAML+ AG + P + HG++TV+G+KMSKSRGT + YLD ++PE+L Sbjct: 296 IVNFHALFWPAMLEGAGYRKPTALNVHGYLTVNGQKMSKSRGTFVKARTYLD-HLDPEYL 354 Query: 362 RYYIAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVSTQWATA 421 RYY A+KL VED+D N +DFV +VN+DL+GK VNIASR AGFI K G + A Sbjct: 355 RYYYASKLGRGVEDLDLNLEDFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVL----VGA 410 Query: 422 DDA--FLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSARDA 479 D A LA R A I YE R++ +A+R +M AD NA++ PW LAK + Sbjct: 411 DPAPELLAAFREAAPGIAEAYEARDFNRAMREIMALADRANAWIAEQAPWALAKQEGQQD 470 Query: 480 QLHEVCSRLLEAFRILTIYLKPVLPQLAAQVEAFLQVQPFQWGDVAVPLADGHVINAYSH 539 ++ VC + FR L I+LKPVLP+LAA EAFL V P W D LA+ H +N + Sbjct: 471 KVQAVCGLGINLFRQLVIFLKPVLPKLAAAAEAFLNVAPLTWADHQTLLAN-HQLNPFQP 529 Query: 540 LMQRVDPKMLDALFDAPEAPAAAASEAAA-AESAIEDLAPEITIDDFA 586 LM R++P ++A+ +A + AAAS+ A E E +A EI D FA Sbjct: 530 LMTRIEPAKVEAMIEASKEDLAAASQPAGNGELVKEPIAAEIDFDAFA 577 >ECs2920_1 [J] COG0143 Methionyl-tRNA synthetase Ecs Escherichia coli O157:H7 Length = 560 Score = 588 bits (1516), Expect = e-167, Method: Compositional matrix adjust. Identities = 290/565 (51%), Positives = 382/565 (67%), Gaps = 14/565 (2%) Query: 3 TSAPRQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMI 62 T +++ VT ALPYANG+ H+GH++E+IQAD+WVR+QRM+G+EV+F+ ADDAHG PIM+ Sbjct: 2 TQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIML 61 Query: 63 AAEKAGITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLI 122 A++ GITP+Q + ++ + GF+I++DN+ ST S EN +LS+ IY L+ E I Sbjct: 62 KAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLK-ENGFI 120 Query: 123 STKTIDQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSG 182 +TI Q YDP K MFLPDR++KG CPKC + DQYGD+CE C A YSPT+L P S +SG Sbjct: 121 KNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSG 180 Query: 183 ATPVMKSSEHFFFKLSDPKCVAFLREWALDSNRLQPEVANKAKEWLDGEGGLGDWDISRD 242 ATPVM+ SEHFFF L P L+ W S LQ +VANK +EW E GL WDISRD Sbjct: 181 ATPVMRDSEHFFFDL--PSFSEMLQAWT-RSGALQEQVANKMQEWF--ESGLQQWDISRD 235 Query: 243 APYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGR--NFDAFMADDKT-EQYHFIG 299 APYFG EIP+APGKYFYVWLDAPIGY+ S KN K G +FD + D T E YHFIG Sbjct: 236 APYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIG 295 Query: 300 KDITYFHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPE 359 KDI YFH+LFWPAML+ + + P N+F HG++TV+G KMSKSRGT I +L+ + + Sbjct: 296 KDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLN-HFDAD 354 Query: 360 WLRYYIAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVSTQWA 419 LRYY AKL+++++D+D N +DFV RVNAD++ K VN+ASR AGFI KRF+G ++++ Sbjct: 355 SLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASE-- 412 Query: 420 TADDAFLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSARDA 479 AD A+ I +E RE+GKA+R +M AD N YVD PW +AK RDA Sbjct: 413 LADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDA 472 Query: 480 QLHEVCSRLLEAFRILTIYLKPVLPQLAAQVEAFLQVQPFQWGDVAVPLADGHVINAYSH 539 L +CS + FR+L YLKPVLP+L + EAFL + W + PL GH +N + Sbjct: 473 DLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLNTE-LTWDGIQQPLL-GHKVNPFKA 530 Query: 540 LMQRVDPKMLDALFDAPEAPAAAAS 564 L R+D K ++AL +A + AA+ Sbjct: 531 LYNRIDMKQVEALVEASKEEVKAAA 555 >ZmetG_1 [J] COG0143 Methionyl-tRNA synthetase EcZ Escherichia coli O157:H7 EDL933 Length = 567 Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust. Identities = 290/565 (51%), Positives = 382/565 (67%), Gaps = 14/565 (2%) Query: 3 TSAPRQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMI 62 T +++ VT ALPYANG+ H+GH++E+IQAD+WVR+QRM+G+EV+F+ ADDAHG PIM+ Sbjct: 2 TQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIML 61 Query: 63 AAEKAGITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLI 122 A++ GITP+Q + ++ + GF+I++DN+ ST S EN +LS+ IY L+ E I Sbjct: 62 KAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYTRLK-ENGFI 120 Query: 123 STKTIDQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSG 182 +TI Q YDP K MFLPDR++KG CPKC + DQYGD+CE C A YSPT+L P S +SG Sbjct: 121 KNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSG 180 Query: 183 ATPVMKSSEHFFFKLSDPKCVAFLREWALDSNRLQPEVANKAKEWLDGEGGLGDWDISRD 242 ATPVM+ SEHFFF L P L+ W S LQ +VANK +EW E GL WDISRD Sbjct: 181 ATPVMRDSEHFFFDL--PSFSEMLQAWT-RSGALQEQVANKMQEWF--ESGLQQWDISRD 235 Query: 243 APYFGIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGR--NFDAFMADDKT-EQYHFIG 299 APYFG EIP+APGKYFYVWLDAPIGY+ S KN K G +FD + D T E YHFIG Sbjct: 236 APYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIG 295 Query: 300 KDITYFHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPE 359 KDI YFH+LFWPAML+ + + P N+F HG++TV+G KMSKSRGT I +L+ + + Sbjct: 296 KDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLN-HFDAD 354 Query: 360 WLRYYIAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVSTQWA 419 LRYY AKL+++++D+D N +DFV RVNAD++ K VN+ASR AGFI KRF+G ++++ Sbjct: 355 SLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASE-- 412 Query: 420 TADDAFLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSARDA 479 AD A+ I +E RE+GKA+R +M AD N YVD PW +AK RDA Sbjct: 413 LADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDA 472 Query: 480 QLHEVCSRLLEAFRILTIYLKPVLPQLAAQVEAFLQVQPFQWGDVAVPLADGHVINAYSH 539 L +CS + FR+L YLKPVLP+L + EAFL + W + PL GH +N + Sbjct: 473 DLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLNTE-LTWDGIQQPLL-GHKVNPFKA 530 Query: 540 LMQRVDPKMLDALFDAPEAPAAAAS 564 L R+D K ++AL +A + AA+ Sbjct: 531 LYNRIDMKQVEALVEASKEEVKAAA 555 >YPO1522_1 [J] COG0143 Methionyl-tRNA synthetase Ype Yersinia pestis Length = 565 Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust. Identities = 292/564 (51%), Positives = 374/564 (66%), Gaps = 13/564 (2%) Query: 7 RQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGNEVHFVGADDAHGAPIMIAAEK 66 +++ VT ALPYANG+ H+GH++E+IQADIWVRFQRM+GN+VHF+ ADDAHG PIM+ A++ Sbjct: 6 KKILVTCALPYANGSIHLGHMLEHIQADIWVRFQRMRGNQVHFICADDAHGTPIMLKAQQ 65 Query: 67 AGITPQQFVANIAAGRKQYLDGFHIAFDNWSSTDSPENHELSQEIYRALRDEAKLISTKT 126 GI P+Q +A ++ +Q GF I++DN+ ST S EN ELS IY L+ I +T Sbjct: 66 MGIEPEQMIAEMSQEHQQDFAGFAISYDNYHSTHSDENRELSSLIYGRLKANG-YIKNRT 124 Query: 127 IDQFYDPVKNMFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSGATPV 186 I Q YDP K MFLPDR++KG CPKC +QYGD+CE C A YSPT+L +P S +SGATPV Sbjct: 125 ISQLYDPEKGMFLPDRFVKGTCPKCKAPEQYGDNCEVCGATYSPTELIDPKSAVSGATPV 184 Query: 187 MKSSEHFFFKLSDPKCVAFLREWALDSNRLQPEVANKAKEWLDGEGGLGDWDISRDAPYF 246 M+ SEHFFF L P L+ W S LQ +VANK +EW D GL WDI+RDAPYF Sbjct: 185 MRESEHFFFDL--PAFSDMLQAWT-RSGALQEQVANKMQEWFD--SGLQQWDITRDAPYF 239 Query: 247 GIEIPDAPGKYFYVWLDAPIGYLASLKNYFAKTGR-NFDAFMADD-KTEQYHFIGKDITY 304 G E+PDAPGKYFYVWLDAPIGY+ + KN K G +FD F D KT+ YHFIGKDI Y Sbjct: 240 GFEVPDAPGKYFYVWLDAPIGYMGAFKNLCDKRGDLDFDEFWGKDAKTDLYHFIGKDIVY 299 Query: 305 FHTLFWPAMLKFAGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWLRYY 364 FH+LFWPAML+ + + P N+F HG++TV+G KMSKSRGT I YL ++ + LRYY Sbjct: 300 FHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKAGTYLKY-LDADCLRYY 358 Query: 365 IAAKLNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVSTQWATADDA 424 AAKL+++++D+D N +DFV RVNAD++ K VN+ASR AGFI KRF G+++ Q AD Sbjct: 359 YAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFAGQLADQ--LADPV 416 Query: 425 FLAKLRGVADEIRSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSARDAQLHEV 484 A I Y RE GKA+R +M AD N YVD PW +AK RDA LH + Sbjct: 417 LYKTFTDAATSIADAYNNRESGKAIREIMALADVANRYVDEQAPWVVAKQEGRDADLHAI 476 Query: 485 CSRLLEAFRILTIYLKPVLPQLAAQVEAFLQVQPFQWGDVAVPLADGHVINAYSHLMQRV 544 CS + FR+L YLKPVLP L + EAFL + W + PL GH I A+ L R+ Sbjct: 477 CSMGINLFRVLMTYLKPVLPSLTERTEAFLNTE-LTWDSIEQPLL-GHSITAFKALFNRI 534 Query: 545 DPKMLDALFDAPEAPAAAASEAAA 568 D ++ + + + A A+ Sbjct: 535 DLDKVNEMVASSKEDMAPATRVTG 558