BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0022.p         (87 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2013 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Pae P...    62   4e-10

>PA2013 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Pae Pseudomonas
           aeruginosa
          Length = 265

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 42/72 (58%)

Query: 6   ELDVRTAQLIDTLLANGPQAMRAAKQLVQVANPLQVTPELSEYTAGVIADLRASAEGREG 65
           EL+ +    I  LL N P+A+ A K L       +++P L  YT   IA +R S EG+EG
Sbjct: 190 ELESQAEAWIANLLQNSPRALVACKALYHEVEAAELSPALRRYTEAAIARIRISPEGQEG 249

Query: 66  LRAFLDKDAPAW 77
           LRAFL+K  PAW
Sbjct: 250 LRAFLEKRTPAW 261