BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0134.p (165 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1471 [S] COG3045 Uncharacterized protein conserved in bacteri... 193 1e-49 PA4564 [S] COG3045 Uncharacterized protein conserved in bacteria... 181 6e-46 YPO0457 [S] COG3045 Uncharacterized protein conserved in bacteri... 160 8e-40 STM4587 [S] COG3045 Uncharacterized protein conserved in bacteri... 160 2e-39 creA [S] COG3045 Uncharacterized protein conserved in bacteria E... 155 4e-38 ZcreA [S] COG3045 Uncharacterized protein conserved in bacteria ... 155 4e-38 ECs5355 [S] COG3045 Uncharacterized protein conserved in bacteri... 155 4e-38 NMA1549 [S] COG3045 Uncharacterized protein conserved in bacteri... 124 1e-28 NMB1335 [S] COG3045 Uncharacterized protein conserved in bacteri... 124 1e-28 mll1531 Non COG 84 2e-16 >RSc1471 [S] COG3045 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 169 Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 98/155 (63%), Positives = 124/155 (80%), Gaps = 3/155 (1%) Query: 12 ILS-AVSLAALLPQSASAEELADVSTAFRWLGKNDRVVIEAYDDPKVIGVTCYVSRARTG 70 ILS A+ AALL +ASAE++ V+T FR G +D++VIEA+DDP V GVTCYVSRARTG Sbjct: 17 ILSIALLTAALLSTTASAEDIGSVNTNFRITG-SDKIVIEAFDDPLVGGVTCYVSRARTG 75 Query: 71 GVKGTVGLAEDKSEASIACRQVAPSLQFKDKLPVQEDVFSERMSILFKRLHVVRVVDARR 130 G+KGT+G+AED SEAS+ACRQV ++F LP Q+D+F++R+S++FK LHVVR VD +R Sbjct: 76 GIKGTLGVAEDVSEASVACRQVG-EIRFVKPLPQQDDMFTQRLSLIFKTLHVVRTVDRKR 134 Query: 131 NTLVYLTYSDKLIDGSPMNAVTAVPVSPATPIPVK 165 N LVYLTYSDK+I GSP N+VTAVP+ PIPVK Sbjct: 135 NVLVYLTYSDKVISGSPKNSVTAVPIPAGQPIPVK 169 >PA4564 [S] COG3045 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 154 Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 81/130 (62%), Positives = 107/130 (82%), Gaps = 1/130 (0%) Query: 29 EELADVSTAFRWLGKNDRVVIEAYDDPKVIGVTCYVSRARTGGVKGTVGLAEDKSEASIA 88 EE+ +VST F+W+G ND++V+EA+DDPKV GVTCY+SRA+TGGVKG +GLAED++EASIA Sbjct: 21 EEIGEVSTVFKWVGPNDKIVVEAFDDPKVQGVTCYLSRAKTGGVKGGLGLAEDRAEASIA 80 Query: 89 CRQVAPSLQFKDKLPVQEDVFSERMSILFKRLHVVRVVDARRNTLVYLTYSDKLIDGSPM 148 CRQV P +QF +L E+VF +R S++FK + VVR D +RN LVYL YSD++I+GSP Sbjct: 81 CRQVGP-IQFSGELKDGEEVFKQRTSLVFKSMQVVRFFDRKRNALVYLVYSDRVIEGSPQ 139 Query: 149 NAVTAVPVSP 158 NAVTA+P+ P Sbjct: 140 NAVTAIPLMP 149 >YPO0457 [S] COG3045 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 155 Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 76/147 (51%), Positives = 111/147 (75%), Gaps = 8/147 (5%) Query: 16 VSLAALLPQSASAEELADVSTAFRWLGKNDRVVIEAYDDPKVIGVTCYVSRARTGGVKGT 75 +SL A+ +A AEE+ V T F+ LG + ++VIEA+DDP V VTCY+SRA+TGG+KG Sbjct: 12 LSLGAI---TAQAEEIGSVDTVFKLLGPDHKIVIEAFDDPDVKNVTCYISRAKTGGIKGG 68 Query: 76 VGLAEDKSEASIACRQVAPSLQFKDKLPVQED----VFSERMSILFKRLHVVRVVDARRN 131 +GLAED ++A+I+C+QV P ++ DK+ ++ VF +R S++FK+L VVR D +RN Sbjct: 69 LGLAEDTADAAISCQQVGP-IELSDKIKNKKSEGAVVFQKRTSLVFKKLQVVRFYDPKRN 127 Query: 132 TLVYLTYSDKLIDGSPMNAVTAVPVSP 158 +LVYLTYSD+++DGSP NA++AVP+ P Sbjct: 128 SLVYLTYSDRIVDGSPKNAISAVPIMP 154 >STM4587 [S] COG3045 Uncharacterized protein conserved in bacteria Sty Salmonella typhimurium LT2 Length = 157 Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 76/138 (55%), Positives = 101/138 (73%), Gaps = 3/138 (2%) Query: 24 QSASAEELADVSTAFRWLGKNDRVVIEAYDDPKVIGVTCYVSRARTGGVKGTVGLAEDKS 83 QSA AE++ V T F+ G + ++V+EA+DDP V VTCYVSRA+TGG+KG +GLAED S Sbjct: 17 QSARAEQIGSVDTVFKMFGPDHKIVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTS 76 Query: 84 EASIACRQVAP---SLQFKDKLPVQEDVFSERMSILFKRLHVVRVVDARRNTLVYLTYSD 140 +A+I+C+QV P S + K+ E VF +R S++FK L VVR D +RNTL YL YSD Sbjct: 77 DAAISCQQVGPIELSDKIKNGKAQGEVVFKKRTSLIFKSLQVVRFYDEKRNTLAYLAYSD 136 Query: 141 KLIDGSPMNAVTAVPVSP 158 K++DGSP NA++AVPV P Sbjct: 137 KVVDGSPKNAISAVPVMP 154 >creA [S] COG3045 Uncharacterized protein conserved in bacteria Eco Escherichia coli K12 Length = 157 Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 3/136 (2%) Query: 26 ASAEELADVSTAFRWLGKNDRVVIEAYDDPKVIGVTCYVSRARTGGVKGTVGLAEDKSEA 85 A AEE+ V T F+ +G + ++V+EA+DDP V VTCYVSRA+TGG+KG +GLAED S+A Sbjct: 19 AHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDA 78 Query: 86 SIACRQVAP---SLQFKDKLPVQEDVFSERMSILFKRLHVVRVVDARRNTLVYLTYSDKL 142 +I+C+QV P S + K+ E VF +R S++FK L VVR DA+RN L YL YSDK+ Sbjct: 79 AISCQQVGPIELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKV 138 Query: 143 IDGSPMNAVTAVPVSP 158 ++GSP NA++AVPV P Sbjct: 139 VEGSPKNAISAVPVMP 154 >ZcreA [S] COG3045 Uncharacterized protein conserved in bacteria EcZ Escherichia coli O157:H7 EDL933 Length = 157 Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 3/136 (2%) Query: 26 ASAEELADVSTAFRWLGKNDRVVIEAYDDPKVIGVTCYVSRARTGGVKGTVGLAEDKSEA 85 A AEE+ V T F+ +G + ++V+EA+DDP V VTCYVSRA+TGG+KG +GLAED S+A Sbjct: 19 AHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDA 78 Query: 86 SIACRQVAP---SLQFKDKLPVQEDVFSERMSILFKRLHVVRVVDARRNTLVYLTYSDKL 142 +I+C+QV P S + K+ E VF +R S++FK L VVR DA+RN L YL YSDK+ Sbjct: 79 AISCQQVGPIELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKV 138 Query: 143 IDGSPMNAVTAVPVSP 158 ++GSP NA++AVPV P Sbjct: 139 VEGSPKNAISAVPVMP 154 >ECs5355 [S] COG3045 Uncharacterized protein conserved in bacteria Ecs Escherichia coli O157:H7 Length = 157 Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 74/136 (54%), Positives = 100/136 (73%), Gaps = 3/136 (2%) Query: 26 ASAEELADVSTAFRWLGKNDRVVIEAYDDPKVIGVTCYVSRARTGGVKGTVGLAEDKSEA 85 A AEE+ V T F+ +G + ++V+EA+DDP V VTCYVSRA+TGG+KG +GLAED S+A Sbjct: 19 AHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDA 78 Query: 86 SIACRQVAP---SLQFKDKLPVQEDVFSERMSILFKRLHVVRVVDARRNTLVYLTYSDKL 142 +I+C+QV P S + K+ E VF +R S++FK L VVR DA+RN L YL YSDK+ Sbjct: 79 AISCQQVGPIELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKV 138 Query: 143 IDGSPMNAVTAVPVSP 158 ++GSP NA++AVPV P Sbjct: 139 VEGSPKNAISAVPVMP 154 >NMA1549 [S] COG3045 Uncharacterized protein conserved in bacteria NmA Neisseria meningitidis Z2491 Length = 186 Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 84/132 (63%), Gaps = 3/132 (2%) Query: 25 SASAEELADVSTAFRWLGKNDRVVIEAYDDPKVIGVTCYVSRARTGGVKGTVGLAEDKSE 84 S +++ ST F LGKNDR+ +E +DDP V GV CY+S A+ GG+K V L ED S+ Sbjct: 18 SGETDKIGRASTVFNILGKNDRIEVEGFDDPDVQGVACYISYAKKGGLKEMVNLEEDASD 77 Query: 85 ASIACRQVAPSLQFKDKLPVQ--EDVFSERMSILFKRLHVVRVVDARRNTLVYLTYSDKL 142 AS++C Q A S+ F D+ V+ ++VF S FK +VR D +R T YL YSDK+ Sbjct: 78 ASVSCVQTASSISF-DETAVRKPKEVFKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKI 136 Query: 143 IDGSPMNAVTAV 154 I GSP N+++AV Sbjct: 137 IQGSPKNSLSAV 148 >NMB1335 [S] COG3045 Uncharacterized protein conserved in bacteria Nme Neisseria meningitidis MC58 Length = 186 Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 84/132 (63%), Gaps = 3/132 (2%) Query: 25 SASAEELADVSTAFRWLGKNDRVVIEAYDDPKVIGVTCYVSRARTGGVKGTVGLAEDKSE 84 S +++ ST F LGKNDR+ +E +DDP V GV CY+S A+ GG+K V L ED S+ Sbjct: 18 SGETDKIGRASTVFNILGKNDRIEVEGFDDPDVQGVACYISYAKKGGLKEMVNLEEDASD 77 Query: 85 ASIACRQVAPSLQFKDKLPVQ--EDVFSERMSILFKRLHVVRVVDARRNTLVYLTYSDKL 142 AS++C Q A S+ F D+ V+ ++VF S FK +VR D +R T YL YSDK+ Sbjct: 78 ASVSCVQTASSISF-DETAVRKPKEVFKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKI 136 Query: 143 IDGSPMNAVTAV 154 I GSP N+++AV Sbjct: 137 IQGSPKNSLSAV 148 >mll1531 Non COG Length = 172 Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 88/161 (54%), Gaps = 21/161 (13%) Query: 5 ARALVGAILSAVSLAALLPQSASAEELADVSTAFRWLGKNDRVVIEAYDDPKVIGVTCYV 64 R L+G L+A L SA AEE+ V W+G ND +++EA DPKV GVTC+V Sbjct: 11 GRKLIGGALAA--CVVLGAGSAVAEEVGKV--GVDWVG-ND-IIVEAIKDPKVDGVTCHV 64 Query: 65 S--------RARTGGVKGTVGLAEDKSEASIACRQVAP-SLQFKDKLPVQEDVFSERMSI 115 S R G ED S++SI+CRQ P ++ D E+VF + +S+ Sbjct: 65 SYFDRSIIDRLHKGN------WFEDPSDSSISCRQTGPITIGDIDMSEGGEEVFKQGISL 118 Query: 116 LFKRLHVVRVVDARRNTLVYLTYSDKLIDGSPMNAVTAVPV 156 ++K+ V R+ D TL+YL++S ++ +GS +VT VP+ Sbjct: 119 IWKKQVVNRIYDKTNETLIYLSHSRQVQNGSAKMSVTTVPL 159