BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0110.p (293 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl598 [C] COG0584 Glycerophosphoryl diester phosphodiesterase A... 134 3e-31 CC3172 [C] COG0584 Glycerophosphoryl diester phosphodiesterase C... 132 1e-30 mlr8455 [C] COG0584 Glycerophosphoryl diester phosphodiesterase ... 92 9e-19 L18600_2 [C] COG0584 Glycerophosphoryl diester phosphodiesterase... 86 7e-17 BH3700 [C] COG0584 Glycerophosphoryl diester phosphodiesterase B... 81 2e-15 PAB0180 [C] COG0584 Glycerophosphoryl diester phosphodiesterase ... 77 4e-14 FN1891 [C] COG0584 Glycerophosphoryl diester phosphodiesterase F... 73 8e-13 SA1542 [C] COG0584 Glycerophosphoryl diester phosphodiesterase S... 71 3e-12 lin1330 [C] COG0584 Glycerophosphoryl diester phosphodiesterase ... 69 1e-11 BS_yhdW [C] COG0584 Glycerophosphoryl diester phosphodiesterase ... 65 2e-10 >AGl598 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 306 Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 91/271 (33%), Positives = 145/271 (53%), Gaps = 17/271 (6%) Query: 23 VLVSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTQDGALVLMHDQTVDRTTNGRG 82 +L +HR WT T+ENSL +R +A G+++ EID + T DG LV++HD+T+DRTT G+G Sbjct: 36 ILTIAHRGFWTATAENSLASVRAAVAAGVEMIEIDTQATADGRLVVIHDETLDRTTTGKG 95 Query: 83 AVTELTLAQVQDLRLYTPGGRQGATLTSRRVPTLQQALAVARGRIVLNLDVKDA-DIGAM 141 V+ L V+ +L G GA +T VPTL++ L ARGRI +N+D K D+ + Sbjct: 96 TVSALPFEVVRAAKLKAGAGGDGADVTDECVPTLEEVLEEARGRITVNIDTKFTRDLPQV 155 Query: 142 VAAILETDTARDVLL--NINPGVDPQQVAWARSLGIAVQTLYFDEKTGASSRSAQLQAMA 199 + +L VL+ +++P + +V + G F + G + L+ + Sbjct: 156 METVLRLGVEDQVLVKTDVDPEAERFEVLGSHWFGRIPHMPMFPVRKGKFAE--DLRRIE 213 Query: 200 RQEPTVLQLIFRDPTVVD-AAGRALAGR-PVRMLVNTMALDIDSGRPMDLAGPYLDTVAV 257 + ++++ F D + D A GRA R +R+ +N++ D +D + DT A+ Sbjct: 214 ALKAPMIEVKFTD--IADLAEGRAEMERQNIRLWINSL----DVSHCLD----FNDTRAL 263 Query: 258 DHPEQVWGQLIAQGVSIIQTDEPQRLLAWLR 288 +PE VWG L G IQTDE + AWL+ Sbjct: 264 SNPEAVWGALAEAGTGAIQTDEVEAFTAWLK 294 >CC3172 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Ccr Caulobacter vibrioides Length = 295 Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 145/290 (50%), Gaps = 40/290 (13%) Query: 24 LVSSHRSCW---------TETSENSLDGIRRCIAEGIDIGEIDVRTTQDGALVLMHDQTV 74 +V +HR C + ENSL+ ++RCI G+D+ E DVR TQDG LV+MHD +V Sbjct: 1 MVVAHRGCHAAAPDHGLASSAPENSLEALQRCIDIGVDMVETDVRRTQDGVLVIMHDPSV 60 Query: 75 DRTTNGRGAVTELTLAQVQDLRLYTPGGRQGATLTSRRVPTLQQALAVARGRIVLNLDVK 134 DRTT+G G V +LTLAQ+Q LRL GG + PTL+ L ARGR+++NL +K Sbjct: 61 DRTTDGGGLVAKLTLAQIQALRL--DGGDEAP-------PTLEAFLRAARGRVLVNLHLK 111 Query: 135 DADIGAMVAAILETDTARD-VLLNINPGVDPQQVAWARSLGIAVQTLYFDEK------TG 187 A A + A D VL D IA Q LY D G Sbjct: 112 -GPFAAQAAEVARRADASDWVLFKARAKTDMSP--------IADQPLYRDVAFMPMVGEG 162 Query: 188 ASSRSAQL-QAMARQEPTVLQLIFRDPTVVDAAGRAL---AGRPVRMLVNTMALDIDSGR 243 A+ + QL Q + RQ + + + + A G A A R+ V L + S + Sbjct: 163 AARDAGQLGQVITRQASGIRPIPAVETRRMGAQGFASVRDAAEAARVRVWANTLGMSSWK 222 Query: 244 PMDLAGPYLDTVAVDHPEQVWGQLIAQGVSIIQTDEPQRLLAWLRRRKLR 293 G D A+ P+ WG+LI QGVSIIQTD P RLL +L+ R+LR Sbjct: 223 --SFFGVSGDRRALRDPDTSWGRLIDQGVSIIQTDHPARLLGYLKSRRLR 270 >mlr8455 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Mlo Mesorhizobium loti Length = 407 Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 92/317 (29%), Positives = 138/317 (43%), Gaps = 74/317 (23%) Query: 23 VLVSSHRSC-----WTETSENSLDGIRRCIAEGIDIGEIDVRTTQDGALVLMHDQTVDRT 77 V+V++HR+ T +ENSL + IA G +I E+D+R ++DG V+MHD +DRT Sbjct: 100 VMVAAHRAGSMQAGKTLYAENSLAAVEGSIAMGAEIVEVDIRRSKDGEFVVMHDSWLDRT 159 Query: 78 TNGRGAVTELTLAQVQDLRLYTPGGRQGATLTSRRVPTLQQALAVARGRIVLNLDVKDAD 137 T +G V + TLA+++ RL G R +T RV TL++ L R RI++NLD K Sbjct: 160 TTCKGEVVKHTLAELKTCRLVIEGTR---AVTDERVSTLREMLLATRDRILINLDNK--- 213 Query: 138 IGAMVAAILETDTARDVLLNINPGVDPQQVAWARSLGIAVQTLYFDEKTGASSRSAQLQ- 196 + G P +A AR LG+A Q + E +R A ++ Sbjct: 214 --------------------LEVGDLPGMIAVARDLGMADQVI-VKENLWNQTRIATVKA 252 Query: 197 AMA------RQEPTVLQLIFRDPTVVDAAGRALAGRPVRMLVNTMA---LDIDSGRPM-- 245 AMA + P + D + A + R + L+N A ++G P+ Sbjct: 253 AMAAIGGGVQFMPIIADDAVHDAGFAETVDHAFSPRAIE-LINWRAGAQTLTETGGPLFS 311 Query: 246 ---------------------------DLAGPYLDTVAVDH--PEQVWGQLIAQGVSIIQ 276 LAG D +AV P + WG + +G +IIQ Sbjct: 312 TRMRAAAVRGNWHIWADTYAIVNKPGGFLAGGRGDELAVQASLPREAWGFWVDRGATIIQ 371 Query: 277 TDEPQRLLAWLRRRKLR 293 TDEP+ + WL R Sbjct: 372 TDEPKAAIDWLAANAYR 388 >L18600_2 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Lla Lactococcus lactis Length = 227 Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 8/115 (6%) Query: 23 VLVSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTQDGALVLMHDQTVDRTTNGRG 82 +L+ +HR TE ENS++ + + E D++TT DG V MHD TVDRTTNG G Sbjct: 3 ILLVNHRGNHTEFPENSVESVLSAKYSAV---ETDIQTTSDGQWVNMHDATVDRTTNGHG 59 Query: 83 AVTELTLAQVQDLRLYTPGGRQGATLTSRRVPTLQQALAVARGRIVLNL-DVKDA 136 AV +LTLAQ+Q+L L G+ +T +VPTL Q LA + + V+ L ++K A Sbjct: 60 AVADLTLAQIQNLYLKNNSGQ----ITQYKVPTLDQYLAACKQKGVIPLIEIKQA 110 >BH3700 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Bha Bacillus halodurans Length = 284 Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 3/111 (2%) Query: 27 SHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTQDGALVLMHDQTVDRTTNGRGAVTE 86 +HR EN++ ++ +D E DV T+DG LVLMHD TVDRTTNG G V++ Sbjct: 43 AHRGASGHAPENTMAAFQKGFDMKVDYIEFDVHMTKDGELVLMHDLTVDRTTNGHGYVSD 102 Query: 87 LTLAQVQDLRLYTPGGRQGATLTSRRVPTLQQALAVARGRIVLNLDVKDAD 137 LTL +++ + G +VPT ++ L V RG++ L +++K + Sbjct: 103 LTLDEIKQ---FDAGSWFHEDFVGEKVPTFEETLDVFRGKVGLLIELKSPE 150 >PAB0180 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Pab Pyrococcus abyssi Length = 250 Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 77/135 (57%), Gaps = 11/135 (8%) Query: 23 VLVSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTQDGALVLMHDQTVDRTTNGRG 82 V++ HR ++ EN+L R+ + G D E DV T+DG ++MHD+T+DRTTN G Sbjct: 7 VILLGHRGYMSKYPENTLLAFRKALEAGADGVEFDVWLTKDGKTIIMHDETLDRTTNISG 66 Query: 83 AVTELTLAQVQDLRLYTPGGRQGATLTSRRVPTLQQALAVARGRIVLNLDVKDADIGAMV 142 ++TL +++ R ++ + VPTL++A +V ++N+++KD D V Sbjct: 67 RQKDMTLDEIKKAR-----------VSGQEVPTLEEAFSVLPEDALVNIEIKDVDAVKEV 115 Query: 143 AAILETDTARDVLLN 157 A+I++ + V+++ Sbjct: 116 ASIVKENNPERVMVS 130 >FN1891 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Fnu Fusobacterium nucleatum Length = 261 Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 3/112 (2%) Query: 25 VSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTQDGALVLMHDQTVDRTTNGRGAV 84 + +HR EN+L I++ I D EID++ T+DG +V++HD VDRTT GRG V Sbjct: 24 IFAHRGASGYAPENTLTAIKKAIEMKADGIEIDIQLTKDGKIVVIHDWKVDRTTTGRGFV 83 Query: 85 TELTLAQVQDLRLYTPGGRQGATLTSRRVPTLQQALAVARGRIVLNLDVKDA 136 EL ++ L G VPTL++ L V ++LN+++KD Sbjct: 84 YELDFDYIRSL---DAGQWYTKDFVGEVVPTLEEVLDVLPNDMMLNIEIKDT 132 >SA1542 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Sau Staphylococcus aureus N315 Length = 247 Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 3/99 (3%) Query: 25 VSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTQDGALVLMHDQTVDRTTNGRGAV 84 + SHR ++ EN++ G R + + + EIDV T+D V++HD+T+DRT++G+G + Sbjct: 12 IVSHRGLPSDFPENTMVGYREVMGLNVAMLEIDVHLTKDQHFVVIHDETIDRTSDGKGRI 71 Query: 85 TELTLAQVQDLRLYTPGGRQGATLTSRRVPTLQQALAVA 123 + TL+Q L+ + G + R+PTL + L++ Sbjct: 72 ADYTLSQ---LKSFDFGSYKDVAFKGERIPTLDEVLSLC 107 >lin1330 [C] COG0584 Glycerophosphoryl diester phosphodiesterase Lin Listeria innocua Length = 235 Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 7/111 (6%) Query: 25 VSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTQDGALVLMHDQTVDRTTNGRGAV 84 + +HR EN+L +++ I G D E+D+ + G L++MHD+ VDRTTNG G + Sbjct: 4 IYAHRGSSGTHPENTLPAMKKAIETGADGIELDIHVLKSGELIVMHDERVDRTTNGTGFL 63 Query: 85 TELTLAQVQDLRLYTPGGRQGATLTSRRVPTLQQALA-VARGRIVLNLDVK 134 + TL +V+ +LYT RVPTL++ V + LN+++K Sbjct: 64 KDFTLLEVK--KLYT----AKHFFRKVRVPTLEEVFKLVNHTGVSLNIELK 108 >BS_yhdW [C] COG0584 Glycerophosphoryl diester phosphodiesterase Bsu Bacillus subtilis Length = 243 Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 3/112 (2%) Query: 23 VLVSSHRSCWTETSENSLDGIRRCIAEGIDIGEIDVRTTQDGALVLMHDQTVDRTTNGRG 82 + + +HR EN++ + D+ E+DV+ T+D +V++HD VDRTTNG G Sbjct: 1 MYIIAHRGASGYAPENTIAAFDLAVKMNADMIELDVQLTKDRQIVVIHDDRVDRTTNGSG 60 Query: 83 AVTELTLAQVQDLRLYTPGGRQGATLTSRRVPTLQQALAVARGRIVLNLDVK 134 V + TL ++Q L G G R+PTL+ L +I L +++K Sbjct: 61 FVKDFTLEELQKL---DAGSWYGPAFQGERIPTLEAVLKRYHKKIGLLIELK 109