BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0093.p         (144 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1764 [Q] COG2050 Uncharacterized protein, possibly involved i...   108   6e-24
SSO2140 [Q] COG2050 Uncharacterized protein, possibly involved i...    62   3e-10

>RSc1764 [Q] COG2050 Uncharacterized protein, possibly involved in aromatic
           compounds catabolism Rso Ralstonia solanacearum
          Length = 144

 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 82/135 (60%), Gaps = 4/135 (2%)

Query: 9   FPQGNPYLQALGVEVLEYGDDRAVMSLLLKPEFMNSWQVAQGGISMTLLDVAMGLSARAG 68
           FP   P+LQ LGV  L+      ++ L L+   MNSW++A GG++MTLLDV+M ++ R+ 
Sbjct: 8   FPINIPFLQWLGVRCLKVAHGEGIVELPLEARHMNSWEMAHGGVTMTLLDVSMAMAGRSA 67

Query: 69  VPDAKSSATVEMSTSFLQPAGRAGDTIVARGHTYHRSTTMCFCQAELWQGE-RLVAKAMG 127
               +   T+EM T+F+QP GR   T+ A     H+STTM FC+ E+   + +LVA+  G
Sbjct: 68  DTHGRGVVTIEMKTAFMQP-GRG--TLRAHARCVHQSTTMAFCEGEVRDADGKLVARGSG 124

Query: 128 TFKLIRRLDISRKLE 142
           TFK ++R+   R  E
Sbjct: 125 TFKFVKRMPPPRTPE 139


>SSO2140 [Q] COG2050 Uncharacterized protein, possibly involved in aromatic
           compounds catabolism Sso Sulfolobus solfataricus
          Length = 140

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 4   ALTEVFPQGNPYLQALGVEVLEYGDDRAVMSLLLKPEFMNSWQVAQGGISMTLLDVAMGL 63
           A+ E+F + +   + L V+V+     RAV+ +  K EF     V  GGI M+ +D+  GL
Sbjct: 7   AIEEIFKKADQIFKFLDVKVINLEKGRAVVEIPYKEEFTRRGGVLHGGIIMSAIDITGGL 66

Query: 64  SARAGVPDAKSSATVEMSTSFLQPAGRAGDTIVARGHTYHRSTTMCFCQAELWQGE-RLV 122
           +A   V DA    T E+  +FL+P  +   TI   G    + +T+   + E    + +L 
Sbjct: 67  AALT-VNDAMDQVTQELKINFLEPMYKGPFTI--EGKVLRKGSTVIVVEIEFKDADGKLG 123

Query: 123 AKAMGTFKLIR 133
           AKA+G++ ++R
Sbjct: 124 AKAIGSWYILR 134