BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0076.p (1145 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMb20609_1 Non COG 681 0.0 AGc4388_1 Non COG 667 0.0 MT3561 Non COG 408 e-113 Rv3454 Non COG 304 8e-82 AGc4388_2 [T] COG0642 Signal transduction histidine kinase Atu A... 273 2e-72 SMb20609_2 [T] COG0642 Signal transduction histidine kinase Sme ... 243 1e-63 all0638_1 [T] COG0642 Signal transduction histidine kinase Nos N... 229 2e-59 all1389_1 [T] COG0642 Signal transduction histidine kinase Nos N... 221 1e-56 alr4878_1 [T] COG0642 Signal transduction histidine kinase Nos N... 214 1e-54 all1178_2 [T] COG0642 Signal transduction histidine kinase Nos N... 202 5e-51 >SMb20609_1 Non COG Length = 675 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/687 (51%), Positives = 470/687 (68%), Gaps = 21/687 (3%) Query: 5 ATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISGA 64 A QRI+ VRR+YN WVAN+TLEDYALR+T S RR+S R++ TA+GA SFLALEAI GA Sbjct: 3 ARQRIIPVRREYNRWVANQTLEDYALRFTAKSARRFSSARISQTAIGAISFLALEAIGGA 62 Query: 65 ITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 124 IT+SYG TNA AI L+ + GLPI YA R+GVD+DLLTRGA FGYIGSTITSLIY Sbjct: 63 ITMSYGTTNAIVAILVASLMILIVGLPISRYAIRHGVDIDLLTRGASFGYIGSTITSLIY 122 Query: 125 ASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLW 184 ASFTFI FA+EA+IM+ A+E+ G+PL GY++ ++++IP+V +G+ LI+R Q+ TQP W Sbjct: 123 ASFTFILFAIEASIMSGALELALGIPLWIGYIVSAVMVIPLVTHGVKLISRFQLVTQPFW 182 Query: 185 LVLLVLPYVCVLYKEPDALSNLMSFAGRAEEG------SSFNLTLFGAAATVAFSLIAQV 238 +VL VLP+ + + + + + +++AG +SF+L FGAA+ V F+L AQ+ Sbjct: 183 IVLNVLPFAFIAFADWEKVGLWLAYAGIHHTSGPPGTLASFHLVEFGAASAVIFALTAQI 242 Query: 239 GEQVDFLRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARA 298 GEQVDFLRFLP + R A+ LAG GW+++G K+L G+ L LA+ VP RA Sbjct: 243 GEQVDFLRFLPPDGE-RKLRHRIAVFLAGSGWVIVGAPKLLAGSFLVVLALSTGVPSTRA 301 Query: 299 VEPTQMYLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHP 358 +P QMY + Y+F + AL + FVVVSQ+KINV NAYAGSLAWSNFF+RLTHSHP Sbjct: 302 ADPAQMYYTAFGYIFPSDTAALLLMAAFVVVSQLKINVMNAYAGSLAWSNFFSRLTHSHP 361 Query: 359 GRVVWLVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHI 418 GRV+WLVFNV IA+LLMELG++ LE L ++S+VA++W+ + ADL +NKPL L+P I Sbjct: 362 GRVIWLVFNVAIALLLMELGIYRLLEETLGIFSIVAMAWLSTISADLFVNKPLGLAPPGI 421 Query: 419 EFKRAHLYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALAT 478 EFKRAHLYD+NPVG+G M ++TL + +A G G+ A++AP+IAL TA +PLIA T Sbjct: 422 EFKRAHLYDINPVGLGTMGVSTLFALVAHFGAAGEIAASLAPYIALVTAFVVSPLIAWWT 481 Query: 479 GSRYYIARRDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSL 538 ++Y+AR +P A+ + C+IC + FE DMA CPAY ICSLCCSL Sbjct: 482 EGKFYLAR---------KPRKSWLAESEITCSICEHPFEPEDMAWCPAYAAPICSLCCSL 532 Query: 539 DARCKDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWML 598 D+RC D CK P+ARL Q+ + ++P KL TR+G Y + G+ V+L M+ Sbjct: 533 DSRCHDMCK-PKARLNTQVATVAKAVLPETVVAKLATRLGRYAISAVISITGIGVILAMI 591 Query: 599 YFQQMADLSGSGLDAPASLRSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQTN 658 Q A S A R++ I +F + ++ GV +W+ VL ++SR VA+EES RQ Sbjct: 592 AHQTTA---ASPETAEVVERTIAI-VFFVFAILAGVVSWFYVLAHDSRVVAEEESSRQNT 647 Query: 659 LLLQEIEAHKQTDAELQRAKEAAESAN 685 LL+EI AHK+TDA LQ AKE AESAN Sbjct: 648 ALLKEIAAHKKTDAALQDAKERAESAN 674 >AGc4388_1 Non COG Length = 675 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/689 (50%), Positives = 469/689 (68%), Gaps = 25/689 (3%) Query: 5 ATQRIVKVRRDYNTWVANETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISGA 64 A QRI+ VRR+YN WVAN+TLEDYALR+T S R++S R+++TA+GA SFLALEAI GA Sbjct: 3 ARQRIIPVRREYNRWVANQTLEDYALRFTAKSARQFSSNRISHTAIGAISFLALEAIGGA 62 Query: 65 ITLSYGFTNAFWAIACVVLLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIY 124 ITLSYG TNAF+AI + GLPI YA R+GVD+DLLTRGA FGYIGSTITSLIY Sbjct: 63 ITLSYGTTNAFYAIIVAAIAMLAVGLPISRYAIRHGVDIDLLTRGASFGYIGSTITSLIY 122 Query: 125 ASFTFIFFALEAAIMAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLW 184 A+FTF+ FA+EA+IM+ A+E+ G+PL GY++ ++++IP+V +G+ LI+R Q+ TQP W Sbjct: 123 AAFTFMLFAIEASIMSGALELALGIPLWIGYIISAVMVIPLVTHGVRLISRFQIITQPFW 182 Query: 185 LVLLVLPYVCVL------YKEPDALSNLMSFAGRAEEGSSFNLTLFGAAATVAFSLIAQV 238 +VL +LP++ + Y A S + +G + FNL FGAA+ V +L++Q+ Sbjct: 183 IVLNILPFIFIALMDWEKYDLWRAFSGIHHASGPPGTVADFNLVEFGAASAVILALMSQI 242 Query: 239 GEQVDFLRFLPQKTPANRGRWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARA 298 GEQVDFLRFLP + +R R A+ LAG GW+++G K+L G+ L L V + RA Sbjct: 243 GEQVDFLRFLPAEGQ-SRVRHRIAVFLAGAGWVVVGVPKLLAGSFLVVLTFSSGVSVDRA 301 Query: 299 VEPTQMYLVGYQYVFGNPALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHP 358 +P QMYL + Y+ N A+ +V FVVVSQ+KINV NAYAGSLAWSNFF+RLTHSHP Sbjct: 302 ADPAQMYLTAFGYMVPNETAAMLLMVAFVVVSQLKINVMNAYAGSLAWSNFFSRLTHSHP 361 Query: 359 GRVVWLVFNVLIAVLLMELGVFNALEHVLALYSLVAISWIGAVVADLVINKPLRLSPAHI 418 GRVVWLVFNV IA+LLMELG++ LE L ++S++A++W+ + ADL INKPL L+P I Sbjct: 362 GRVVWLVFNVAIALLLMELGIYRLLEETLGIFSIIAMAWLCTISADLFINKPLGLAPPGI 421 Query: 419 EFKRAHLYDVNPVGVGAMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALAT 478 EFKRAHLYD+NPVGVG+MA++ ++ +A G G A++AP++ L A ++P +ALAT Sbjct: 422 EFKRAHLYDINPVGVGSMALSATIALMAHFGTFGPLAASLAPYLTLIVAFIASPALALAT 481 Query: 479 GSRYYIARRDTLAEQNYRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSL 538 ++Y+AR +P + + C+IC + FE DMA CPAY ICSLCCSL Sbjct: 482 KGKFYLAR---------KPRQKWHEESSITCSICEHPFEPEDMAWCPAYAAPICSLCCSL 532 Query: 539 DARCKDRCKTPRARLPNQILHTLRQLIPARFAVKLNTRIGHYLSVFGLLAGGLAVVLWML 598 D+RC D CK P+A+L Q+ + +P + KL TR+G Y +A +AV Sbjct: 533 DSRCHDMCK-PKAKLNYQVASVAKTFLPRQLVAKLATRLGRY-----GMAAAIAVTAIGG 586 Query: 599 YFQQMADLSGSGLDAPASL--RSVFIKLFCLLLVVVGVGAWWLVLTNESRAVAQEESERQ 656 +A G+ A A + R++ I +F + V+ G+ W+LVL ++SR VA+EES RQ Sbjct: 587 ILALIAHQVGTASPATADVVNRTILI-VFFVFAVIAGIVCWFLVLAHDSRVVAEEESSRQ 645 Query: 657 TNLLLQEIEAHKQTDAELQRAKEAAESAN 685 LLL+EI AHK+TDA LQ AKE AE+AN Sbjct: 646 NTLLLKEIAAHKKTDAALQDAKETAEAAN 674 >MT3561 Non COG Length = 562 Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust. Identities = 231/542 (42%), Positives = 333/542 (61%), Gaps = 14/542 (2%) Query: 23 ETLEDYALRYTPLSFRRWSEFRLANTALGATSFLALEAISGAITLSYGFTNAFWAIACVV 82 ETLEDY LR P S+RRW + +ALG ++LA AI + +++G NA IA Sbjct: 25 ETLEDYTLRLAPRSYRRWPPAVVGISALGGIAYLADFAIGANVGITWGTANALCGIAIFA 84 Query: 83 LLFFLTGLPICYYAARYGVDMDLLTRGAGFGYIGSTITSLIYASFTFIFFALEAAIMAQA 142 L+ F+TGLP+ YYAARY +D+DL+TRG+GFGY GS +T++I+A+FTFIFFALE +IMAQ Sbjct: 85 LVVFVTGLPLAYYAARYNIDLDLITRGSGFGYYGSVVTNVIFATFTFIFFALEGSIMAQG 144 Query: 143 IEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLWLVLLVLPYVCVLYKEPDA 202 +++ +PL GY ++II P+V YG+ ++++LQ+WT PLWL+L+ P+ ++ PD+ Sbjct: 145 LKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVSHPDS 204 Query: 203 LSNLMSFAGRAEEGS-SFNLTLFGAAATVAFSLIAQVGEQVDFLRFLPQKTPANRGRWWS 261 + S+AG+ G SF L AA V SLIAQ+ EQ+D+LRF+P +TP N RWW+ Sbjct: 205 IGQFFSYAGKDGHGGLSFGSVLL--AAGVCLSLIAQIAEQIDYLRFMPPRTPENANRWWT 262 Query: 262 ALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAV--EPTQMYLVGYQYVFGNPALA 319 LLAGPGW+ G K + G LA + + +P + + +P ++ Y+ F LA Sbjct: 263 WTLLAGPGWVAFGATKQIIGLFLA-VYLMANIPGSSTIANQPVHQFMQIYR-TFVPGWLA 320 Query: 320 LGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVLIAVLLMELGV 379 L V+ VV+SQIKINVTNAY+GSLAW+N F RLT +PGRVV+L N+ IA++LME + Sbjct: 321 LTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILMEANM 380 Query: 380 FNALEHVLALYSLVAISWIGAVVADLVINKP-LRLSPAHIEFKRAHLYDVNPVGVGAMAI 438 F+ L +L Y+ ++W+ AV +D+ NK L LSP EF+R LY +NPVG G++ + Sbjct: 381 FDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFGSLLL 440 Query: 439 ATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYYIARRDTLAEQNYRPV 498 A LS + G LG + +P +A+ TAL P++A AT +YY+ R + Sbjct: 441 AAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLPMYDE 500 Query: 499 TPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARCKD------RCKTPRAR 552 + VL C +C FE PDM C + +CSLC S D + + R P + Sbjct: 501 HGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHIPGDQ 560 Query: 553 LP 554 +P Sbjct: 561 VP 562 >Rv3454 Non COG Length = 422 Score = 304 bits (778), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 169/426 (39%), Positives = 249/426 (58%), Gaps = 14/426 (3%) Query: 139 MAQAIEIYFGLPLVYGYVLCSIIIIPMVAYGITLINRLQMWTQPLWLVLLVLPYVCVLYK 198 MAQ +++ +PL GY ++II P+V YG+ ++++LQ+WT PLWL+L+ P+ ++ Sbjct: 1 MAQGLKLGLHIPLWAGYACSTLIIFPLVVYGMKVLSQLQLWTTPLWLILMAAPFGYLVVS 60 Query: 199 EPDALSNLMSFAGRAEEGS-SFNLTLFGAAATVAFSLIAQVGEQVDFLRFLPQKTPANRG 257 PD++ S+AG+ G SF L AA V SLIAQ+ EQ+D+LRF+P +TP N Sbjct: 61 HPDSIGQFFSYAGKDGHGGLSFGSVLL--AAGVCLSLIAQIAEQIDYLRFMPPRTPENAN 118 Query: 258 RWWSALLLAGPGWILLGGAKMLGGALLAFLAIQHEVPMARAV--EPTQMYLVGYQYVFGN 315 RWW+ LLAGPGW+ G K + G LA + + +P + + +P ++ Y+ F Sbjct: 119 RWWTWTLLAGPGWVAFGATKQIIGLFLA-VYLMANIPGSSTIANQPVHQFMQIYR-TFVP 176 Query: 316 PALALGAVVLFVVVSQIKINVTNAYAGSLAWSNFFARLTHSHPGRVVWLVFNVLIAVLLM 375 LAL V+ VV+SQIKINVTNAY+GSLAW+N F RLT +PGRVV+L N+ IA++LM Sbjct: 177 GWLALTLAVILVVLSQIKINVTNAYSGSLAWTNSFTRLTKHYPGRVVFLGVNLAIALILM 236 Query: 376 ELGVFNALEHVLALYSLVAISWIGAVVADLVINKP-LRLSPAHIEFKRAHLYDVNPVGVG 434 E +F+ L +L Y+ ++W+ AV +D+ NK L LSP EF+R LY +NPVG G Sbjct: 237 EANMFDFLNTILGCYANCGMAWVVAVASDIGFNKYLLGLSPKTPEFRRGMLYAINPVGFG 296 Query: 435 AMAIATLLSTLAMSGVLGKTVAAMAPFIALGTALASAPLIALATGSRYYIARRDTLAEQN 494 ++ +A LS + G LG + +P +A+ TAL P++A AT +YY+ R + Sbjct: 297 SLLLAAGLSIVTFFGGLGAALQPYSPLVAIVTALVMPPILAAATKGKYYLRRTHDGIDLP 356 Query: 495 YRPVTPGQAQPVLACAICGNAFETPDMAHCPAYQGAICSLCCSLDARCKD------RCKT 548 + VL C +C FE PDM C + +CSLC S D + + R Sbjct: 357 MYDEHGNPSAAVLTCHVCHQDFERPDMLACQTHGAHVCSLCLSTDKQAEHVLPGLARAHI 416 Query: 549 PRARLP 554 P ++P Sbjct: 417 PGDQVP 422 >AGc4388_2 [T] COG0642 Signal transduction histidine kinase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 246 Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 132/245 (53%), Positives = 176/245 (71%) Query: 687 AKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKDAIGVIRRSGEHLLSLIDGLLD 746 AKSR+V G+SHELRTPLN++LGYAQIL D TIP R+ AI VIRRS +HL LIDGLLD Sbjct: 1 AKSRYVVGLSHELRTPLNAVLGYAQILERDETIPAPRQSAIKVIRRSADHLSGLIDGLLD 60 Query: 747 IAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFDKSGRLPQIVHADQKRLR 806 I+KIEAG++++ S+E+ ++ FL+Q+V MF PQA+ KGL FR +++ LPQ V D+KRLR Sbjct: 61 ISKIEAGRLQVYSNEINIKDFLDQVVDMFRPQAQAKGLEFRHERTAALPQYVRTDEKRLR 120 Query: 807 QILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVIDTGIGIADDDRERIFLPFERSSAAN 866 QIL+NLL NA+KFTD G VT + Y ++A F V DTG GIA+ D RI+ PF+R A + Sbjct: 121 QILVNLLSNAIKFTDEGSVTFDVAYRSQVASFTVSDTGRGIAEKDLARIYEPFQRGEAES 180 Query: 867 LREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSSFHLKIYLPEVHVPRPRIKLEDQMS 926 +R G GLGL I+R+L + +GGE+SV S+ GS+F +++ L VH P E + Sbjct: 181 VRPMPGLGLGLTITRLLTNTLGGEISVSSEKDNGSTFRVRLMLSAVHRPSTAPAPEKTIR 240 Query: 927 GYAGP 931 Y+GP Sbjct: 241 SYSGP 245 >SMb20609_2 [T] COG0642 Signal transduction histidine kinase Sme Sinorhizobium meliloti Length = 244 Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 123/245 (50%), Positives = 167/245 (68%), Gaps = 2/245 (0%) Query: 687 AKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKDAIGVIRRSGEHLLSLIDGLLD 746 AKSR+V G+SHELRTPLN++LGYAQIL D TIPP R+ AI IRRS +HL LIDGLLD Sbjct: 1 AKSRYVVGLSHELRTPLNAVLGYAQILERDETIPPPRQGAIKAIRRSADHLSGLIDGLLD 60 Query: 747 IAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFDKSGRLPQIVHADQKRLR 806 I+KIEAGK+++ S+E+ ++ FL+QIV MF PQA+ KG+ F +++ LPQ V D KRLR Sbjct: 61 ISKIEAGKLQVYSNEINIQDFLDQIVDMFRPQAQAKGIAFEHNRAASLPQYVRTDDKRLR 120 Query: 807 QILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVIDTGIGIADDDRERIFLPFERSSAAN 866 QIL+NLL NA+KFT+ G + + Y ++A F + D+G GI++ D RIF PF+R A Sbjct: 121 QILVNLLSNALKFTERGHIRFDVAYRSQVASFTIEDSGRGISEKDLPRIFEPFQRGEAEY 180 Query: 867 LREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSSFHLKIYLPEVHVPRPRIKLEDQMS 926 G GLGL I+R+L +GGE+SV S+ +G++F +++ L V P + Sbjct: 181 RMP--GLGLGLTITRLLTQTLGGEISVTSEKDKGTAFKVRLMLSAVDRPAALKDPVRNIK 238 Query: 927 GYAGP 931 Y GP Sbjct: 239 SYHGP 243 >all0638_1 [T] COG0642 Signal transduction histidine kinase Nos Nostoc sp. PCC 7120 Length = 615 Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 120/250 (48%), Positives = 165/250 (66%), Gaps = 8/250 (3%) Query: 668 KQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKDAI 727 KQ+ A AKE+A+SAN AKS F+A MSHELRTPLN ILGYAQIL +P + + Sbjct: 344 KQSKALADAAKESADSANNAKSEFLANMSHELRTPLNGILGYAQILGRSKVLPDKERQGV 403 Query: 728 GVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFR 787 +I + G HLL+LI+ +LD++KIEA K+ LAS L +F++ +V + + +QKG+ F Sbjct: 404 NIIHQCGSHLLTLINDILDLSKIEARKLELASQAFHLPSFMQGVVEICHIRVQQKGIEFH 463 Query: 788 FDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYA-------REIAYFDV 840 ++ LP + AD+KRLRQ+LINLLGNA+KFTD G V LR++ R F + Sbjct: 464 YEPDADLPAGISADEKRLRQVLINLLGNAIKFTDRGSVALRVQRTGLEESDPRTKLRFSI 523 Query: 841 IDTGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQG 900 +DTG+GIA D ++F FE+ R+ GTGLGLAIS+ LV +MGG++ V+SQ+G G Sbjct: 524 VDTGVGIASADINKLFQTFEQVGEQK-RKVEGTGLGLAISQQLVQLMGGQIQVKSQLGVG 582 Query: 901 SSFHLKIYLP 910 S F +I LP Sbjct: 583 SEFFFEIILP 592 >all1389_1 [T] COG0642 Signal transduction histidine kinase Nos Nostoc sp. PCC 7120 Length = 595 Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 118/253 (46%), Positives = 168/253 (66%), Gaps = 12/253 (4%) Query: 660 LLQEIEAHKQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATI 719 +L ++A +Q A+L+++KEAA+ AN AKS F+A MSHELRTPLN ILG AQIL +T+ Sbjct: 315 VLWRVQAFEQ--AQLKKSKEAADLANHAKSEFLANMSHELRTPLNGILGCAQILQRSSTL 372 Query: 720 PPARKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQA 779 P + I +I + G HLL+LI+ +LD+AKIEA K+ L +++ +F++ I + +A Sbjct: 373 PEQEQHHINIIEQCGSHLLTLINDILDLAKIEAKKLELHGEDVHFPSFIQGIAEICQIRA 432 Query: 780 EQKGLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRYAREIAY-- 837 QK + F ++ + LP +H D KRLRQ+L+NLLGNA+KFTDHG V L++ E + Sbjct: 433 AQKDILFVYEPASNLPIWLHIDAKRLRQVLLNLLGNAIKFTDHGQVKLKVETIEESSTQK 492 Query: 838 -------FDVIDTGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGE 890 + + DTGIGI D + +IFLPFE+ R+ GTGLGLAI+R LV +MG + Sbjct: 493 PVKHRIRYCIEDTGIGITDAELSKIFLPFEQVGEKK-RQTEGTGLGLAITRQLVQMMGSD 551 Query: 891 LSVQSQVGQGSSF 903 + V SQVG GS+F Sbjct: 552 IHVTSQVGHGSTF 564 >alr4878_1 [T] COG0642 Signal transduction histidine kinase Nos Nostoc sp. PCC 7120 Length = 735 Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 120/290 (41%), Positives = 171/290 (58%), Gaps = 20/290 (6%) Query: 662 QEIEAH-KQTDAELQRAKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIP 720 QE+E + AE+ AKE A++AN AKS F+A MSHELRTPLN ILGYAQIL +D+ Sbjct: 447 QELENRVAERTAEITAAKEVADAANRAKSEFLANMSHELRTPLNGILGYAQILQLDSNTN 506 Query: 721 PARKDAIGVIRRSGEHLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAE 780 + + I G HLL+LI+ +LDIAKIEA K+ L E L L + M + E Sbjct: 507 DEQMQGLNTIYECGSHLLTLINDILDIAKIEAKKLELYPQEFDLGRLLLGVCEMCHIKVE 566 Query: 781 QKGLHFRFDKSGRLPQIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRY--------- 831 QKG+ F++ + +P AD+KR+RQ+LIN+L NA+KFTD+G VT + Sbjct: 567 QKGISFKYQFNDYIPSKTFADEKRIRQVLINILSNAIKFTDNGTVTFDVEVVACTGTKLI 626 Query: 832 --AREI-----AYFDVIDTGIGIADDDRERIFLPFERSSAANLREDIGTGLGLAISRMLV 884 +I F + DTGIG+ D+ ++IFLPFE+ NL + GTGLGLAIS ++ Sbjct: 627 TNTNQILPVHQLRFQIEDTGIGMTDEQLKKIFLPFEQ-VGDNLHKSEGTGLGLAISSQIL 685 Query: 885 HIMGGELSVQSQVGQGSSFHLKIYLPEVHVPRPRIKLEDQMS--GYAGPS 932 +MG ++ V+S G+G+ F + LP + + + +E Q + GY G + Sbjct: 686 ELMGSDIKVESVYGKGTKFWFDLDLPIIDTGKISLSVESQKNIIGYEGKT 735 >all1178_2 [T] COG0642 Signal transduction histidine kinase Nos Nostoc sp. PCC 7120 Length = 252 Score = 202 bits (513), Expect = 5e-51, Method: Composition-based stats. Identities = 109/228 (47%), Positives = 146/228 (64%), Gaps = 6/228 (2%) Query: 687 AKSRFVAGMSHELRTPLNSILGYAQILHVDATIPPARKDAIGVIRRSGEHLLSLIDGLLD 746 AKS F+A MSHELRTPLN ILGYAQIL I PA + I +I + G HLL LI+ +LD Sbjct: 1 AKSEFLASMSHELRTPLNGILGYAQILERSENIAPAALEGINIIHQCGSHLLILINDILD 60 Query: 747 IAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFDKSGRLPQIVHADQKRLR 806 ++KIEAGK+ L + + FL +V M +A QKG+ F + LPQ ++AD+KRLR Sbjct: 61 LSKIEAGKLELHNTDFDFSYFLTGVVEMCRIRALQKGISFHYLPDPDLPQAINADEKRLR 120 Query: 807 QILINLLGNAVKFTDHGGVTLRLRYAREIAYFDVI-----DTGIGIADDDRERIFLPFER 861 QI+INLLGNA+KFT+ GGV ++ A F+ I DTG+G+ + +IFLPFE+ Sbjct: 121 QIIINLLGNAIKFTETGGVNFTIQVLEAGADFNKIRFQVEDTGVGMTPEQLTKIFLPFEQ 180 Query: 862 SSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSSFHLKIYL 909 N + + GTGLGLAIS + +MG ++ V S +G GS F L + L Sbjct: 181 VGDKNKQAE-GTGLGLAISCRIAELMGSQIQVDSILGTGSKFWLDLNL 227