BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0049.p (545 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO4062 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yer... 286 7e-77 RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 286 9e-77 STM1626 [NT] COG0840 Methyl-accepting chemotaxis protein Sty Sal... 271 3e-72 RSp0507 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 270 7e-72 ECs2596 [NT] COG0840 Methyl-accepting chemotaxis protein Ecs Esc... 267 4e-71 tar [NT] COG0840 Methyl-accepting chemotaxis protein Eco Escheri... 267 5e-71 YPO1675 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yer... 267 6e-71 Ztar [NT] COG0840 Methyl-accepting chemotaxis protein EcZ Escher... 265 2e-70 RSp1406 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 265 2e-70 STM1919 [NT] COG0840 Methyl-accepting chemotaxis protein Sty Sal... 263 7e-70 >YPO4062 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yersinia pestis Length = 649 Score = 286 bits (733), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 158/307 (51%), Positives = 223/307 (72%), Gaps = 1/307 (0%) Query: 206 WLLTQSIAAPLHEMQALTLQIAAGDLTSTVPAATGRSELASLLKNVGSMQESLRSLVSKS 265 W +T+ I PL + +IA GDLT+ ++ EL L+ V M E+LR+++ + Sbjct: 306 WRMTRQITVPLRATLDMAERIATGDLTAATTSSR-TDELGMLMNAVARMNENLRAMIDEI 364 Query: 266 RQAALSVNQASSEAAAGNADLSARTEQAASSLEQTASAMEEIAATAQQSAEFARSANAQV 325 R V+ AS E AAGN DLS+RTEQ A+++E+TA++ME++ AT +Q+ + A AN Sbjct: 365 RIGVSQVSHASGEIAAGNTDLSSRTEQQAAAVEETAASMEQLNATVKQNTDNAHHANQLA 424 Query: 326 AQASGVAQHGGQVMGDVVQTMGRIDESSRRIADIIGVIDSIAFQTNILALNAAVEAARAG 385 +AS AQ GG+++ DVV+TM I SS+RI++I VI+SIAFQTNILALNAAVEAARAG Sbjct: 425 TEASQTAQQGGKLVNDVVRTMNDISGSSKRISEITSVINSIAFQTNILALNAAVEAARAG 484 Query: 386 EQGRGFAVVASEVRTLAQRSATAAREIKELINASLAAVDGGMSLVGDAGKIIQDVVQNVE 445 EQGRGFAVVASEVR LAQRSA AA+EI+ LI S++ V+ G SLV +AG ++++V++V Sbjct: 485 EQGRGFAVVASEVRNLAQRSAQAAKEIEGLIGESVSQVNAGTSLVKNAGNTMEEIVRSVS 544 Query: 446 LVRGTISEISVAAEEQSRGIAEVNIAISNMEQTTQQNASLVEQTTAATMQLNQQAVLLAE 505 VR ++EI+ A++EQSRGI +V++AIS M+ TTQQNA+LVE++ AA L +QA+LLA+ Sbjct: 545 HVRDIMAEIASASDEQSRGITQVSLAISEMDSTTQQNAALVEESAAAADSLAEQAILLAQ 604 Query: 506 VISGFKL 512 ++ F+L Sbjct: 605 AVAVFRL 611 >RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 543 Score = 286 bits (732), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 204/524 (38%), Positives = 303/524 (57%), Gaps = 24/524 (4%) Query: 4 LNRLTVGRRLALGFVVIIGLMLAMLLAMLAQLKQVEQANQILQKEQAERLSLAKEWREN- 62 ++ + +G RL F +++ L++ + + +L + E+ ++L+ + + N Sbjct: 3 ISDMRIGVRLGAAFALVVALLIGIAAVGIQRLDDNNTKMGQIVSERYSLIALSNQIKNNG 62 Query: 63 -----IVVNVARALALGVTANETLLKFFADDMAGLVTRTTVIQKRYAELDDTEEGKTILE 117 I+ N+ L VT E K+ +D A + R +L T++GK + + Sbjct: 63 YKANGILSNL-----LLVTTPEQKTKYMSD-YAAIRQANAQAYGRLEKLLTTDQGKALFK 116 Query: 118 RMAKERKRY-LVVRQQMEEVGADAATRQQ-LVQ-DMKSISAAYIKEGTSLVQYQ----ER 170 R Y VR+ V AD + L Q DM + Y +V +Q E Sbjct: 117 EQFDARSAYGASVRKFFALVDADNVQEARALYQGDMSRLQDRYYVLVDKMVDHQAGEMEH 176 Query: 171 RTAELGGQIDAAIDRSRFVLMGATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGD 230 +E Q A + + +++ A LLA+ G +T++I P++ L +A G+ Sbjct: 177 DVSEAAAQ--GANAKIQMIVLAVLAT--LLAIATGAFITRTITRPINHAMHLAEAVAQGN 232 Query: 231 LTSTVPAATGRSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSART 290 LT + T + E+ LL + M E+L +VS+ R ++ +ASSE A+GN DLS+RT Sbjct: 233 LTHLLEVDT-QDEIGRLLAALKHMIENLHGIVSQVRGGTDTITRASSEVASGNIDLSSRT 291 Query: 291 EQAASSLEQTASAMEEIAATAQQSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRID 350 EQ ASSLE+TA+AME++ +T +Q+A+ A+ A+ + AS VA GG + + +QTM I+ Sbjct: 292 EQQASSLEETAAAMEQLTSTVKQNADNAQEASRLASNASMVATKGGDAVDEAIQTMSTIN 351 Query: 351 ESSRRIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAR 410 SSR+I DIIGVID IAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQRSA AA+ Sbjct: 352 TSSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAK 411 Query: 411 EIKELINASLAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNI 470 EIK LI S+ V G + V +AG+II+DVV ++ V +SEIS ++ EQS GI ++N Sbjct: 412 EIKALIEDSVGHVSTGTAKVEEAGQIIRDVVAGIQNVTNIVSEISASSREQSDGIEQINE 471 Query: 471 AISNMEQTTQQNASLVEQTTAATMQLNQQAVLLAEVISGFKLPA 514 AI+ M++ TQ+NASLVE++ A L QA LA+++S FKL A Sbjct: 472 AITQMDKATQENASLVEESATAAQALQDQANQLADMVSTFKLHA 515 >STM1626 [NT] COG0840 Methyl-accepting chemotaxis protein Sty Salmonella typhimurium LT2 Length = 541 Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 161/334 (48%), Positives = 227/334 (67%), Gaps = 4/334 (1%) Query: 182 AIDRSRFVLM---GATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPAA 238 A R+R +M GA +++L ++ +L +++ PL + + +IAAGDLT Sbjct: 197 AYQRTRLGMMFMIGAFTLALVLTLMTFMVLRRTVIQPLQQSASRIERIAAGDLT-MADEP 255 Query: 239 TGRSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASSLE 298 TGRSE+ L ++ MQ +L+ V RQ A + + +SE AGN DLS+RTEQ A+++E Sbjct: 256 TGRSEIGRLSHHLQQMQHALQQTVGAVRQGAEEIYRGTSEITAGNTDLSSRTEQQAAAIE 315 Query: 299 QTASAMEEIAATAQQSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRIDESSRRIAD 358 QTA++ME++ AT +Q+A+ A A+ ASG A GGQ++ VVQTMG I SS++I++ Sbjct: 316 QTAASMEQLTATVKQNADNAHHASKLAEDASGKASRGGQMVSGVVQTMGNISTSSKKISE 375 Query: 359 IIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELINA 418 I VI+SIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLA RSA AA+EI+ LI A Sbjct: 376 ITAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLIGA 435 Query: 419 SLAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQT 478 S++ ++ G V AG + ++V V+ V + +I+ A++EQSRGI +V+ AIS M++ Sbjct: 436 SVSLIEQGSEEVIAAGSTMNEIVDAVKRVTDIMLDIAAASDEQSRGIVQVSQAISEMDRV 495 Query: 479 TQQNASLVEQTTAATMQLNQQAVLLAEVISGFKL 512 TQQNASLVE+ +AA L +QA L + + F+L Sbjct: 496 TQQNASLVEEASAAARSLEEQAARLTQAVDAFRL 529 >RSp0507 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 600 Score = 270 bits (690), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 166/337 (49%), Positives = 233/337 (69%), Gaps = 4/337 (1%) Query: 180 DAAIDRSR---FVLMGATAASILLAVLLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVP 236 + A+ RS+ ++++GA IL AV + L ++I+ PL M +I+ G+LT + Sbjct: 179 EGAVTRSQNFLWLIIGAIVVGILSAVACAFGLDRAISVPLSRMLGSFGEISRGNLTEQI- 237 Query: 237 AATGRSELASLLKNVGSMQESLRSLVSKSRQAALSVNQASSEAAAGNADLSARTEQAASS 296 T + E+ +L + + MQ L + R + S+ A+ + AAGN DLS RTE+ ASS Sbjct: 238 VVTSQDEMGALTRGLQDMQRGLIRTIETMRGGSDSIASATKQIAAGNMDLSQRTEEQASS 297 Query: 297 LEQTASAMEEIAATAQQSAEFARSANAQVAQASGVAQHGGQVMGDVVQTMGRIDESSRRI 356 LE+TAS+MEE+ + +Q+A+ AR A+ AS +A GG+V+G VV+TM I++SS++I Sbjct: 298 LEETASSMEELTSIVKQNADNARQASTLAVNASDIAVKGGEVVGRVVETMAGINDSSKKI 357 Query: 357 ADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKELI 416 ADIIGVI+ IAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQRSA AA+EIKELI Sbjct: 358 ADIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKELI 417 Query: 417 NASLAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEISVAAEEQSRGIAEVNIAISNME 476 + S+ V+ G +LV +AG +I +VV V+ V + EIS A++EQS GI +VN A++ M+ Sbjct: 418 SDSVGRVENGTTLVAEAGTVIDEVVVAVKRVTDIMGEISAASDEQSSGIEQVNQAVNQMD 477 Query: 477 QTTQQNASLVEQTTAATMQLNQQAVLLAEVISGFKLP 513 + TQQNA+LVE+ AA L +QA LL E ++ F+LP Sbjct: 478 EVTQQNAALVEEAAAAAQSLEEQARLLRETVASFRLP 514 >ECs2596 [NT] COG0840 Methyl-accepting chemotaxis protein Ecs Escherichia coli O157:H7 Length = 553 Score = 267 bits (683), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 163/318 (51%), Positives = 218/318 (68%), Gaps = 6/318 (1%) Query: 215 PLHEMQALTLQIAAGDLTSTVPAATGRSELASLLKNVGSMQESLRSLVSKSRQAALSVNQ 274 PL ++ A +IA G+L +T+ GRSE+ L ++V MQ SL V+ R+ + ++ Sbjct: 219 PLAKIIAHIREIAGGNLANTL-TIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYA 277 Query: 275 ASSEAAAGNADLSARTEQAASSLEQTASAMEEIAATAQQSAEFARSANAQVAQASGVAQH 334 + E AAGN DLS+RTEQ AS+LE+TA++ME++ AT +Q+A+ AR A+ AS AQH Sbjct: 278 GTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASDTAQH 337 Query: 335 GGQVMGDVVQTMGRIDESSRRIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVV 394 GG+V+ VV+TM I +SS++IADII VID IAFQTNILALNAAVEAARAGEQGRGFAVV Sbjct: 338 GGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVV 397 Query: 395 ASEVRTLAQRSATAAREIKELINASLAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEI 454 A EVR LA RSA AA+EIK LI S++ VD G LV AG+ + ++V V V + EI Sbjct: 398 AGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMNNIVDAVTRVTDIMGEI 457 Query: 455 SVAAEEQSRGIAEVNIAISNMEQTTQQNASLVEQTTAATMQLNQQAVLLAEVISGFKLPA 514 + A++EQSRGI +V +A+S M+ TQQNASLV+++ AA L +QA L + +S F+L A Sbjct: 458 ASASDEQSRGIDQVALAVSEMDHVTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLAA 517 Query: 515 -----QYQ*SSHPAIRQP 527 + Q S PA QP Sbjct: 518 SPLTNKPQTPSRPASEQP 535 >tar [NT] COG0840 Methyl-accepting chemotaxis protein Eco Escherichia coli K12 Length = 553 Score = 267 bits (683), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 163/318 (51%), Positives = 219/318 (68%), Gaps = 6/318 (1%) Query: 215 PLHEMQALTLQIAAGDLTSTVPAATGRSELASLLKNVGSMQESLRSLVSKSRQAALSVNQ 274 PL ++ A +IA G+L +T+ GRSE+ L ++V MQ SL V+ R+ + ++ Sbjct: 219 PLAKIIAHIREIAGGNLANTL-TIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYA 277 Query: 275 ASSEAAAGNADLSARTEQAASSLEQTASAMEEIAATAQQSAEFARSANAQVAQASGVAQH 334 + E AAGN DLS+RTEQ AS+LE+TA++ME++ AT +Q+A+ AR A+ AS AQH Sbjct: 278 GTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASDTAQH 337 Query: 335 GGQVMGDVVQTMGRIDESSRRIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVV 394 GG+V+ VV+TM I +SS++IADII VID IAFQTNILALNAAVEAARAGEQGRGFAVV Sbjct: 338 GGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVV 397 Query: 395 ASEVRTLAQRSATAAREIKELINASLAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEI 454 A EVR LA RSA AA+EIK LI S++ VD G LV AG+ + ++V V V + EI Sbjct: 398 AGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEI 457 Query: 455 SVAAEEQSRGIAEVNIAISNMEQTTQQNASLVEQTTAATMQLNQQAVLLAEVISGFKLPA 514 + A++EQSRGI +V +A+S M++ TQQNASLV+++ AA L +QA L + +S F+L A Sbjct: 458 ASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLAA 517 Query: 515 -----QYQ*SSHPAIRQP 527 + Q S PA QP Sbjct: 518 SPLTNKPQTPSRPASEQP 535 >YPO1675 [NT] COG0840 Methyl-accepting chemotaxis protein Ype Yersinia pestis Length = 557 Score = 267 bits (682), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 161/322 (50%), Positives = 216/322 (67%), Gaps = 3/322 (0%) Query: 208 LTQSIAAPLHEMQALTLQIAAGDLTSTVPAATGRSELASLLKNVGSMQESLRSLVSKSRQ 267 + Q + PL+ + A IA GDLT + GR+E+ +L ++ MQ L ++V + R Sbjct: 214 MQQILIHPLNHLIAHIKHIANGDLTQNIEVH-GRNEVGTLAASLKHMQSELVTIVGEVRV 272 Query: 268 AALSVNQASSEAAAGNADLSARTEQAASSLEQTASAMEEIAATAQQSAEFARSANAQVAQ 327 A ++ +SE A GN DLSARTEQ A+SLE+TA++ME++ AT +Q+AE AR A+ Sbjct: 273 GADAIYSGASEIAVGNNDLSARTEQQAASLEETAASMEQLTATVKQNAENARQASQLALS 332 Query: 328 ASGVAQHGGQVMGDVVQTMGRIDESSRRIADIIGVIDSIAFQTNILALNAAVEAARAGEQ 387 AS AQ GG+V+ DVVQTM I SS++IADI VID IAFQTNILALNAAVEAARAGEQ Sbjct: 333 ASETAQKGGKVVADVVQTMHEIAGSSQKIADITSVIDGIAFQTNILALNAAVEAARAGEQ 392 Query: 388 GRGFAVVASEVRTLAQRSATAAREIKELINASLAAVDGGMSLVGDAGKIIQDVVQNVELV 447 GRGFAVVA EVR LAQRSA AA+EIK LI+ S+ VD G LV AG+ + D+V V V Sbjct: 393 GRGFAVVAGEVRNLAQRSAQAAKEIKGLIDDSVNRVDLGSVLVESAGETMGDIVNAVTRV 452 Query: 448 RGTISEISVAAEEQSRGIAEVNIAISNMEQTTQQNASLVEQTTAATMQLNQQAVLLAEVI 507 + EI+ A++EQSRGI ++ A++ M++ TQQNASLVE++ +A L +QA +L + + Sbjct: 453 TDIMGEIASASDEQSRGIDQIGQAVAEMDRVTQQNASLVEESASAAASLEEQASMLTQAM 512 Query: 508 SGFKLPAQYQ*SSHPA--IRQP 527 S F L S+ ++QP Sbjct: 513 SVFVLSVDNSNSTSDVRKVKQP 534 >Ztar [NT] COG0840 Methyl-accepting chemotaxis protein EcZ Escherichia coli O157:H7 EDL933 Length = 553 Score = 265 bits (678), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 162/318 (50%), Positives = 217/318 (68%), Gaps = 6/318 (1%) Query: 215 PLHEMQALTLQIAAGDLTSTVPAATGRSELASLLKNVGSMQESLRSLVSKSRQAALSVNQ 274 PL ++ A +IA G+L +T+ GRSE+ L ++V MQ SL V+ R+ + ++ Sbjct: 219 PLAKIIAHIREIAGGNLANTL-TIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYA 277 Query: 275 ASSEAAAGNADLSARTEQAASSLEQTASAMEEIAATAQQSAEFARSANAQVAQASGVAQH 334 + E AAGN DLS+RTEQ AS+LE+TA++ME++ AT +Q+A+ AR A+ AS AQH Sbjct: 278 GTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASDTAQH 337 Query: 335 GGQVMGDVVQTMGRIDESSRRIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVV 394 GG+V+ V +TM I +SS++IADII VID IAFQTNILALNAAVEAARAGEQGRGFAVV Sbjct: 338 GGKVVDGVXKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVV 397 Query: 395 ASEVRTLAQRSATAAREIKELINASLAAVDGGMSLVGDAGKIIQDVVQNVELVRGTISEI 454 A EVR LA RSA AA+EIK LI S++ VD G LV AG+ + ++V V V + EI Sbjct: 398 AGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMNNIVDAVTRVTDIMGEI 457 Query: 455 SVAAEEQSRGIAEVNIAISNMEQTTQQNASLVEQTTAATMQLNQQAVLLAEVISGFKLPA 514 + A++EQSRGI +V +A+S M+ TQQNASLV+++ AA L +QA L + +S F+L A Sbjct: 458 ASASDEQSRGIDQVALAVSEMDHVTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLAA 517 Query: 515 -----QYQ*SSHPAIRQP 527 + Q S PA QP Sbjct: 518 SPLTNKPQTPSRPASEQP 535 >RSp1406 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 608 Score = 265 bits (677), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 165/317 (52%), Positives = 216/317 (68%), Gaps = 5/317 (1%) Query: 203 LLGWLLTQSIAAPLHEMQALTLQIAAGDLTSTVPAATGRSELASLLKNVGSMQESLRSLV 262 LL W L +SI PL+ I GDLT + E +L + MQESL+ +V Sbjct: 205 LLTWSLRRSITVPLNRAIEQAEHITRGDLTHAIHVDRA-DETGRMLLALQRMQESLQGMV 263 Query: 263 SKSRQAALSVNQASSEAAAGNADLSARTEQAASSLEQTASAMEEIAATAQQSAEFARSAN 322 + R + ++ A+ + AAGNADLS RTEQ ASSLE+TAS+ME++ +Q+A+ AR A+ Sbjct: 264 GQVRTGSDAIASATQQIAAGNADLSQRTEQQASSLEETASSMEQLTGMVKQNADSARQAS 323 Query: 323 AQVAQASGVAQHGGQVMGDVVQTMGRIDESSRRIADIIGVIDSIAFQTNILALNAAVEAA 382 AS +A GG+V+G VV+TM I +SSR+IADIIGVI+ IAFQTNILALNAAVEAA Sbjct: 324 TLAVNASDIAVKGGEVVGRVVETMAGIHDSSRKIADIIGVIEGIAFQTNILALNAAVEAA 383 Query: 383 RAGEQGRGFAVVASEVRTLAQRSATAAREIKELINASLAAVDGGMSLVGDAGKIIQDVVQ 442 RAGEQGRGFAVVA EVR+LAQRSA AA+EIK LI+ S+ V+ G +LV +AG +I +VV Sbjct: 384 RAGEQGRGFAVVAGEVRSLAQRSAGAAKEIKTLISDSVGRVESGTTLVAEAGTVIDEVVV 443 Query: 443 NVELVRGTISEISVAAEEQSRGIAEVNIAISNMEQTTQQNASLVEQTTAATMQLNQQAVL 502 V+ V G + EIS A++ QS GIA+VN A++ M++ TQQNA+LVEQ AA M L +QA Sbjct: 444 AVKRVTGIMGEISAASDAQSEGIAQVNQAVTQMDEATQQNAALVEQAAAAAMSLQEQADG 503 Query: 503 LAEVISGFKL----PAQ 515 L ++ F+ PAQ Sbjct: 504 LRGTVAAFRTRADAPAQ 520 >STM1919 [NT] COG0840 Methyl-accepting chemotaxis protein Sty Salmonella typhimurium LT2 Length = 553 Score = 263 bits (672), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 163/322 (50%), Positives = 224/322 (69%), Gaps = 4/322 (1%) Query: 206 WL-LTQSIAAPLHEMQALTLQIAAGDLTSTVPAATGRSELASLLKNVGSMQESLRSLVSK 264 W + ++ PL + +IA+GDLT T+ +GR+E+ L V MQ SL V++ Sbjct: 209 WFGIRHALLNPLARVITHIREIASGDLTKTLTV-SGRNEIGELAGTVEHMQRSLIDTVTQ 267 Query: 265 SRQAALSVNQASSEAAAGNADLSARTEQAASSLEQTASAMEEIAATAQQSAEFARSANAQ 324 R+ + ++ +SE AAGN DLS+RTEQ AS+LE+TA++ME++ AT +Q+A+ AR A +Q Sbjct: 268 VREGSDAIYSGTSEIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQA-SQ 326 Query: 325 VAQ-ASGVAQHGGQVMGDVVQTMGRIDESSRRIADIIGVIDSIAFQTNILALNAAVEAAR 383 +AQ AS A+HGG+V+ VV TM I +SS++IADII VID IAFQTNILALNAAVEAAR Sbjct: 327 LAQSASETARHGGKVVDGVVNTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAAR 386 Query: 384 AGEQGRGFAVVASEVRTLAQRSATAAREIKELINASLAAVDGGMSLVGDAGKIIQDVVQN 443 AGEQGRGFAVVA EVR LA RSA AA+EIK LI S++ VD G LV AG+ + D+V Sbjct: 387 AGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMTDIVNA 446 Query: 444 VELVRGTISEISVAAEEQSRGIAEVNIAISNMEQTTQQNASLVEQTTAATMQLNQQAVLL 503 V V + EI+ A++EQSRGI +V +A+S M++ TQQNASLV+++ AA L +QA L Sbjct: 447 VTRVTDIMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALEEQASRL 506 Query: 504 AEVISGFKLPAQYQ*SSHPAIR 525 + +S F+L ++ + P +R Sbjct: 507 TQAVSAFRLASRPLAVNKPEMR 528