BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0014.p         (144 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Rv1542c [R] COG2346 Truncated hemoglobins Mtu Mycobacterium tube...    79   4e-15
MT1594 [R] COG2346 Truncated hemoglobins MtC Mycobacterium tuber...    79   4e-15

>Rv1542c [R] COG2346 Truncated hemoglobins Mtu Mycobacterium tuberculosis
           H37Rv
          Length = 136

 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 61/115 (53%)

Query: 29  TLFADLGGLLVIRQTVHDFMANMLADARIRHTFEHSNLKRVEDMLVEQFCMLSGGPCTYT 88
           +++  +GG   I   V DF   +LAD ++   F  +N+ R++   VE F    GGP  YT
Sbjct: 14  SIYDKIGGHEAIEVVVEDFYVRVLADDQLSAFFSGTNMSRLKGKQVEFFAAALGGPEPYT 73

Query: 89  GDPMKEVHQGLKLTNADFNALVEDLQQAMDKNGIPFRTQNRLLALLAPMQRDTVT 143
           G PMK+VHQG  +T   F+ +   L  A+   G+P  T   +L ++AP+  D  +
Sbjct: 74  GAPMKQVHQGRGITMHHFSLVAGHLADALTAAGVPSETITEILGVIAPLAVDVTS 128


>MT1594 [R] COG2346 Truncated hemoglobins MtC Mycobacterium tuberculosis
           CDC1551
          Length = 136

 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 61/115 (53%)

Query: 29  TLFADLGGLLVIRQTVHDFMANMLADARIRHTFEHSNLKRVEDMLVEQFCMLSGGPCTYT 88
           +++  +GG   I   V DF   +LAD ++   F  +N+ R++   VE F    GGP  YT
Sbjct: 14  SIYDKIGGHEAIEVVVEDFYVRVLADDQLSAFFSGTNMSRLKGKQVEFFAAALGGPEPYT 73

Query: 89  GDPMKEVHQGLKLTNADFNALVEDLQQAMDKNGIPFRTQNRLLALLAPMQRDTVT 143
           G PMK+VHQG  +T   F+ +   L  A+   G+P  T   +L ++AP+  D  +
Sbjct: 74  GAPMKQVHQGRGITMHHFSLVAGHLADALTAAGVPSETITEILGVIAPLAVDVTS 128