BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0185.p
         (385 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311310|ref|YP_003775402.1| exopolysaccharide methanolan sy...   570   e-164

>gi|300311310|ref|YP_003775402.1| exopolysaccharide methanolan
           synthase [Herbaspirillum seropedicae SmR1]
          Length = 547

 Score =  570 bits (1468), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 295/303 (97%), Positives = 296/303 (97%), Gaps = 3/303 (0%)

Query: 1   MSLEQTLNPPQERSPGPLSWLLVALGLAAMYVPSFVDLLHGVWGSERNAHGPIVLVVACV 60
           MSLEQTLNPPQERSPGPLSWLLVALGLAAMYVPSFVDLLHGVWGSERNAHGPIVLVVACV
Sbjct: 1   MSLEQTLNPPQERSPGPLSWLLVALGLAAMYVPSFVDLLHGVWGSERNAHGPIVLVVACV 60

Query: 61  YLGVRIRQLRDAGLIERQPAPLAGSLMVLLGLLCFALGRAQTVLFMEAGSLIPILAGIVL 120
           YLGVRIRQLRDAGLIERQPAPLAGSLMVLLGLLCFALGRAQTVLFMEAGSLIPIL GIVL
Sbjct: 61  YLGVRIRQLRDAGLIERQPAPLAGSLMVLLGLLCFALGRAQTVLFMEAGSLIPILVGIVL 120

Query: 121 LVYGVKTCRRLWFAFFFMLFMVPLPASVVDVLTQPLKIGVSYAAQHLLQWLDYPVARSGV 180
           LVYGVKTCRRLWFAFFFMLFMVPLPASVVDVLTQPLKIGVSYAAQHLLQWLDYPVARSGV
Sbjct: 121 LVYGVKTCRRLWFAFFFMLFMVPLPASVVDVLTQPLKIGVSYAAQHLLQWLDYPVARSGV 180

Query: 181 IISIGPYQLLVADACAGLNSLFTLEALGLLYMNLVRHPSLVRNTLLALLIVPISFTANTV 240
           IISIGPYQLLVADACAGLNSLFTLEALGLLYMNLVRHPSLVRNTLLALLIVPISFTANTV
Sbjct: 181 IISIGPYQLLVADACAGLNSLFTLEALGLLYMNLVRHPSLVRNTLLALLIVPISFTANTV 240

Query: 241 RVVVLALITYYLGDAAGQGFLHGFAGMLLFFVALGLIIGMDSLLRWIAVQLA---GRPVC 297
           RVVVLALITYYLGDAAGQGFLHGFAGMLLFFVALGLIIGMDSLLRWIAVQLA   GR + 
Sbjct: 241 RVVVLALITYYLGDAAGQGFLHGFAGMLLFFVALGLIIGMDSLLRWIAVQLARGRGRALP 300

Query: 298 PAP 300
            AP
Sbjct: 301 AAP 303


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.328    0.144    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,050,906
Number of extensions: 42362
Number of successful extensions: 224
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 223
Number of HSP's successfully gapped: 2
Length of query: 385
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 298
Effective length of database: 1,207,925
Effective search space: 359961650
Effective search space used: 359961650
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 131 (55.1 bits)