BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0084.p (485 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311216|ref|YP_003775308.1| exopolyphosphatase [Herbaspiril... 981 0.0 >gi|300311216|ref|YP_003775308.1| exopolyphosphatase [Herbaspirillum seropedicae SmR1] Length = 485 Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust. Identities = 484/485 (99%), Positives = 484/485 (99%) Query: 1 MFAAVDLGSNSFRLHIGKYEDEGIRVIKSARDPIRLAAGIDKTGNLTEQACQSAIDSLTR 60 MFAAVDLGSNSFRLHIGKYEDEGIRVIKSARDPIRLAAGIDKTGNLTEQACQSAIDSLTR Sbjct: 1 MFAAVDLGSNSFRLHIGKYEDEGIRVIKSARDPIRLAAGIDKTGNLTEQACQSAIDSLTR 60 Query: 61 FRAILRDYPLTAVRVVATNTLRVAKNAGELLPALERAIGYPVEIISGEEEGRLIYMGVAG 120 FRAILRDYPLTAVRVVATNTLRVAKNAGELLPALERAIGYPVEIISGEEEGRLIYMGVAG Sbjct: 61 FRAILRDYPLTAVRVVATNTLRVAKNAGELLPALERAIGYPVEIISGEEEGRLIYMGVAG 120 Query: 121 VLADAGEERMVIDIGGGSTEVIRGLGEHIRHVESFGIGTVNQSLAFFPDGAITAAAFERA 180 VLADAGEERMVIDIGGGSTEVIRGLGEHIRHVESFGIGTVNQSLAFFPDGAITAAAFERA Sbjct: 121 VLADAGEERMVIDIGGGSTEVIRGLGEHIRHVESFGIGTVNQSLAFFPDGAITAAAFERA 180 Query: 181 IISARSHVEDAVHLFSFDATKVNVYGSSGTMRAIADTIRRNNMGDGRITLPSLADLMQRL 240 IISARSHVEDAVHLFSFDA KVNVYGSSGTMRAIADTIRRNNMGDGRITLPSLADLMQRL Sbjct: 181 IISARSHVEDAVHLFSFDAAKVNVYGSSGTMRAIADTIRRNNMGDGRITLPSLADLMQRL 240 Query: 241 IDFGHVSQIALDGMKPDRAGVIMGGLAVLIGFMQEFGIEVITPVEAGLRMGVMWDLQLRA 300 IDFGHVSQIALDGMKPDRAGVIMGGLAVLIGFMQEFGIEVITPVEAGLRMGVMWDLQLRA Sbjct: 241 IDFGHVSQIALDGMKPDRAGVIMGGLAVLIGFMQEFGIEVITPVEAGLRMGVMWDLQLRA 300 Query: 301 TKADRRDRSVEEFARRFHIDAARAHGVADTALGFFQLLKPATDSYARYLYWSALLHETGL 360 TKADRRDRSVEEFARRFHIDAARAHGVADTALGFFQLLKPATDSYARYLYWSALLHETGL Sbjct: 301 TKADRRDRSVEEFARRFHIDAARAHGVADTALGFFQLLKPATDSYARYLYWSALLHETGL 360 Query: 361 VVSPTGYHKHSAYMIANADLPGFTTREQRLMSTLILGQKGNLKKISEMLADIDFAKAVLA 420 VVSPTGYHKHSAYMIANADLPGFTTREQRLMSTLILGQKGNLKKISEMLADIDFAKAVLA Sbjct: 361 VVSPTGYHKHSAYMIANADLPGFTTREQRLMSTLILGQKGNLKKISEMLADIDFAKAVLA 420 Query: 421 LRLAVMFRHAHITLDLEKVRVKLKSRIDLEIRRDYIKEHPSISFWFQKEQEWWAGIGVDF 480 LRLAVMFRHAHITLDLEKVRVKLKSRIDLEIRRDYIKEHPSISFWFQKEQEWWAGIGVDF Sbjct: 421 LRLAVMFRHAHITLDLEKVRVKLKSRIDLEIRRDYIKEHPSISFWFQKEQEWWAGIGVDF 480 Query: 481 AVKVI 485 AVKVI Sbjct: 481 AVKVI 485 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.323 0.138 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,501,046 Number of extensions: 65184 Number of successful extensions: 234 Number of sequences better than 1.0e-08: 1 Number of HSP's gapped: 234 Number of HSP's successfully gapped: 1 Length of query: 485 Length of database: 1,619,870 Length adjustment: 89 Effective length of query: 396 Effective length of database: 1,198,455 Effective search space: 474588180 Effective search space used: 474588180 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 132 (55.5 bits)