BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0055.p (250 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311189|ref|YP_003775281.1| serine O-acetyltransferase [Her... 506 e-145 gi|300311650|ref|YP_003775742.1| serine O-acetyltransferase [Her... 141 5e-35 gi|300310909|ref|YP_003775001.1| serine O-acetyltransferase [Her... 138 3e-34 gi|300311326|ref|YP_003775418.1| serine O-acetyltransferase [Her... 69 3e-13 gi|300313481|ref|YP_003777573.1| isoleucine patch superfamily ac... 57 1e-09 >gi|300311189|ref|YP_003775281.1| serine O-acetyltransferase [Herbaspirillum seropedicae SmR1] Length = 250 Score = 506 bits (1302), Expect = e-145, Method: Compositional matrix adjust. Identities = 250/250 (100%), Positives = 250/250 (100%) Query: 1 MFSRLREDIASIRARDPAARNSWEVLTCYPGLHALILHRWAKACWQAQLKWLGRFISQLG 60 MFSRLREDIASIRARDPAARNSWEVLTCYPGLHALILHRWAKACWQAQLKWLGRFISQLG Sbjct: 1 MFSRLREDIASIRARDPAARNSWEVLTCYPGLHALILHRWAKACWQAQLKWLGRFISQLG 60 Query: 61 RMLTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGTSLVKGAKRHPT 120 RMLTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGTSLVKGAKRHPT Sbjct: 61 RMLTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGTSLVKGAKRHPT 120 Query: 121 LGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAGTTAVGNPARIIERNTVSAEPDQ 180 LGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAGTTAVGNPARIIERNTVSAEPDQ Sbjct: 121 LGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAGTTAVGNPARIIERNTVSAEPDQ 180 Query: 181 AAARLFAAYGVMPNGDDPLSKALHGLINQVAAQEQQLQVMLAALQGAGIGCRRLEEAGQF 240 AAARLFAAYGVMPNGDDPLSKALHGLINQVAAQEQQLQVMLAALQGAGIGCRRLEEAGQF Sbjct: 181 AAARLFAAYGVMPNGDDPLSKALHGLINQVAAQEQQLQVMLAALQGAGIGCRRLEEAGQF 240 Query: 241 DAAQLNRLVD 250 DAAQLNRLVD Sbjct: 241 DAAQLNRLVD 250 >gi|300311650|ref|YP_003775742.1| serine O-acetyltransferase [Herbaspirillum seropedicae SmR1] Length = 307 Score = 141 bits (355), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 79/164 (48%), Positives = 100/164 (60%), Gaps = 8/164 (4%) Query: 3 SRLREDIASIRARDPAARNSWEVLTCYPGLHALILHRWAKACWQAQLKWLGRFISQLGRM 62 S+L D+ + DPAAR+ EVL CYPG A+I +R A +Q L L R I++L Sbjct: 124 SQLDTDVLAAYQGDPAARSVDEVLLCYPGALAMIHYRLAHRLYQLGLPLLARIIAELAHA 183 Query: 63 LTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGT--------SLVKG 114 TGI+IHPGA IG FIDHG GVVIGETA++G++ IYQ VTLG L KG Sbjct: 184 ATGIDIHPGAQIGTGFFIDHGTGVVIGETAVIGNNVRIYQAVTLGAKRFPTDADGKLEKG 243 Query: 115 AKRHPTLGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAG 158 RHP + V+I AGA +LG +G GA +G N +T +VPAG Sbjct: 244 RARHPIVEDDVVIYAGATILGRIRLGRGAVIGGNVWLTHDVPAG 287 >gi|300310909|ref|YP_003775001.1| serine O-acetyltransferase [Herbaspirillum seropedicae SmR1] Length = 311 Score = 138 bits (348), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 76/163 (46%), Positives = 95/163 (58%), Gaps = 8/163 (4%) Query: 5 LREDIASIRARDPAARNSWEVLTCYPGLHALILHRWAKACWQAQLKWLGRFISQLGRMLT 64 L DI + DPAA + E+L CYPG A+I HR A A Q L R I+ + T Sbjct: 135 LVSDIQAAYHGDPAASSISEILLCYPGTTAIIYHRLAHALHQLGAPLLARLIADIAHSAT 194 Query: 65 GIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTLGGT--------SLVKGAK 116 GI+IHP A IG FIDHG GVVIGET I+G + +YQ VTLG SLVKG Sbjct: 195 GIDIHPAAQIGPSFFIDHGTGVVIGETTIIGRNVRLYQAVTLGAKRFPQEPDGSLVKGIP 254 Query: 117 RHPTLGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPAGT 159 RHP + V++ AGA +LG T+G G+ +G N +T VPAG+ Sbjct: 255 RHPIVEDDVVVYAGATLLGRITIGRGSVIGGNVWLTHSVPAGS 297 >gi|300311326|ref|YP_003775418.1| serine O-acetyltransferase [Herbaspirillum seropedicae SmR1] Length = 188 Score = 68.9 bits (167), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 77/149 (51%), Gaps = 12/149 (8%) Query: 32 LHALILHRWAKACWQAQLKWLGRFISQLGRMLT--------GIEIHPGATIGRRVFIDHG 83 + A+ ++RW + +A+ L R I+ L L GI + A IG + I H Sbjct: 26 IWAIWVYRWGRRI-EARPAGLSRKIANLFYWLAFRLVETVFGISLPRTARIGPGLRIWHF 84 Query: 84 MGVVIGETAIVGDDSTIYQGVTLGGTSLVKGAKRHPTLGRGVIIGAGAKVLGGFTVGDGA 143 + + ++G T+ QGVT+G + P LG V +GA A+VLG +GDG Sbjct: 85 GNIFLHGDVVIGAGCTLRQGVTIGNR---REGGPVPVLGDNVELGAYAQVLGAVHLGDGC 141 Query: 144 KVGSNAVVTKEVPAGTTAVGNPARIIERN 172 KVG+ +VV +VP G TAVG PAR+I R Sbjct: 142 KVGAMSVVLDDVPPGATAVGAPARVIART 170 >gi|300313481|ref|YP_003777573.1| isoleucine patch superfamily acetyltransferase [Herbaspirillum seropedicae SmR1] Length = 188 Score = 57.0 bits (136), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 20/132 (15%) Query: 56 ISQLGRMLTGIEIHPGATIGRRVFIDHGMGVVIGETAIVGDDSTIYQGVTL-----GGTS 110 I + +G I + G+ VF+ G V+IG V ++ +IY VTL G S Sbjct: 23 IWHWAHICSGARIGERCSFGQNVFV--GNDVLIGNNVKVQNNVSIYDAVTLEDDVFCGPS 80 Query: 111 LV-------------KGAKRHPTLGRGVIIGAGAKVLGGFTVGDGAKVGSNAVVTKEVPA 157 +V K R + RG IGA A ++ G +G+ A +G+ AVVT++VPA Sbjct: 81 MVFTNVNNPRSAVSRKHEYRRTLVRRGASIGANATIVCGHEIGEYAFIGAGAVVTRDVPA 140 Query: 158 GTTAVGNPARII 169 VG PAR I Sbjct: 141 YALMVGTPARRI 152 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.321 0.137 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 878,696 Number of extensions: 41356 Number of successful extensions: 185 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 177 Number of HSP's successfully gapped: 5 Length of query: 250 Length of database: 1,619,870 Length adjustment: 83 Effective length of query: 167 Effective length of database: 1,226,865 Effective search space: 204886455 Effective search space used: 204886455 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)