BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0022.p
         (360 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311156|ref|YP_003775248.1| type I antifreeze protein:HlyD ...   707   0.0  
gi|300311270|ref|YP_003775362.1| HlyD family membrane-fusion pro...   304   6e-84

>gi|300311156|ref|YP_003775248.1| type I antifreeze protein:HlyD
           family secretion protein [Herbaspirillum seropedicae
           SmR1]
          Length = 360

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/360 (99%), Positives = 358/360 (99%)

Query: 1   MIMKLPLLKKPLLAAAALLLLLGAAFLAWQRLHHNGPGEGFTSGNGRIEATEVDVATKLG 60
           MIMKLPLLKKPLLAAAALLLLLGAAFLAWQRLHHNGPGEGFTSGNGRIEATEVDVATKLG
Sbjct: 1   MIMKLPLLKKPLLAAAALLLLLGAAFLAWQRLHHNGPGEGFTSGNGRIEATEVDVATKLG 60

Query: 61  GRVDAILVNEGDFVSAGQPLARMQVLSLQAQRDEALAHQQQSLSAVASAEAQVAVRQSDY 120
           GRVDAILVNEGDFVSAGQPLARMQVLSLQAQRDEALAHQQQSLSAVASAEAQVAVRQSDY
Sbjct: 61  GRVDAILVNEGDFVSAGQPLARMQVLSLQAQRDEALAHQQQSLSAVASAEAQVAVRQSDY 120

Query: 121 QAALAQTVQRESELDAARRRLARSEVLVREGASSVQEVDDDRARVRSMEAAVTASKAQVT 180
           QAALAQTVQRESELDAARRRLARSEVLVREGASSVQEVDDDRARVRSMEAAVTASKAQVT
Sbjct: 121 QAALAQTVQRESELDAARRRLARSEVLVREGASSVQEVDDDRARVRSMEAAVTASKAQVT 180

Query: 181 AAEATVVAARTQVSGARSTVTAAQATVQRIKVDIDDSTLAAPRAGRVQYRIAQPGEVLGG 240
           AAEA VVAARTQVSGARSTVTAAQATVQRIKVDIDDSTLAAPRAGRVQYRIAQPGEVLGG
Sbjct: 181 AAEAAVVAARTQVSGARSTVTAAQATVQRIKVDIDDSTLAAPRAGRVQYRIAQPGEVLGG 240

Query: 241 GGKVLNLVDLSDVYMTFFLPEVVAGKLALGSEARIILDAAPQYVIPARISFVASTAQFTP 300
           GGKVLNLVDLSDVYMTFFLPEVV GKLALGSEARIILDAAPQYVIPARISFVASTAQFTP
Sbjct: 241 GGKVLNLVDLSDVYMTFFLPEVVVGKLALGSEARIILDAAPQYVIPARISFVASTAQFTP 300

Query: 301 KTVETASERQKLMFRVKAQIDPALLQQHLTLVKTGLPGVAWVRTDQNQPWPAQLAVQVPQ 360
           KTVETASERQKLMFRVKAQIDPALLQQHLTLVKTGLPGVAWVRTDQNQPWPAQLAVQVPQ
Sbjct: 301 KTVETASERQKLMFRVKAQIDPALLQQHLTLVKTGLPGVAWVRTDQNQPWPAQLAVQVPQ 360


>gi|300311270|ref|YP_003775362.1| HlyD family membrane-fusion
           protein [Herbaspirillum seropedicae SmR1]
          Length = 358

 Score =  304 bits (779), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 168/347 (48%), Positives = 229/347 (65%)

Query: 8   LKKPLLAAAALLLLLGAAFLAWQRLHHNGPGEGFTSGNGRIEATEVDVATKLGGRVDAIL 67
           L+ PL A   L++L    +  W          G  S NGR+EATEVD+ ++LGGR+  +L
Sbjct: 5   LQHPLFAGLLLVVLAAVGWTGWAWWRDADAPAGLVSSNGRLEATEVDIGSRLGGRIRHML 64

Query: 68  VNEGDFVSAGQPLARMQVLSLQAQRDEALAHQQQSLSAVASAEAQVAVRQSDYQAALAQT 127
           V+EG+ V AGQ LA +QV SL AQ  EA A QQ++   V  A+AQ+A+R+S+ + A A T
Sbjct: 65  VDEGEAVQAGQVLAYLQVDSLHAQLREARAQQQRASQGVTVAQAQLAMRRSEQRIAQALT 124

Query: 128 VQRESELDAARRRLARSEVLVREGASSVQEVDDDRARVRSMEAAVTASKAQVTAAEATVV 187
           VQR   L AA RR+ RS+ L R  A + QEVDD+   +    A + A++AQ   A A + 
Sbjct: 125 VQRHKSLSAATRRVERSQPLGRMQALTAQEVDDEENTLAEARAQLDAAQAQEEGARAAIR 184

Query: 188 AARTQVSGARSTVTAAQATVQRIKVDIDDSTLAAPRAGRVQYRIAQPGEVLGGGGKVLNL 247
           AA   V+ AR+ + AAQA   RI+ D+++S + APR G +QYR+AQ GEV+  G K+LNL
Sbjct: 185 AAEADVASARALLEAAQAATARIEADLEESAIRAPRDGHIQYRLAQAGEVVSEGSKLLNL 244

Query: 248 VDLSDVYMTFFLPEVVAGKLALGSEARIILDAAPQYVIPARISFVASTAQFTPKTVETAS 307
           +DLSD++M FFLP  +AGK+ LG E R++LDAAP   +PARI++V+  AQFTPK VETA+
Sbjct: 245 IDLSDLHMHFFLPAELAGKVRLGQEVRVVLDAAPTDALPARITYVSRQAQFTPKAVETAN 304

Query: 308 ERQKLMFRVKAQIDPALLQQHLTLVKTGLPGVAWVRTDQNQPWPAQL 354
           ERQKLMFRVKAQ+ P+        +K G+PGVAW++T +  PWP  L
Sbjct: 305 ERQKLMFRVKAQLTPSSRGSIAPHLKAGMPGVAWIKTAEQLPWPKTL 351


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.317    0.129    0.350 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 803,624
Number of extensions: 27142
Number of successful extensions: 211
Number of sequences better than 1.0e-08: 6
Number of HSP's gapped: 208
Number of HSP's successfully gapped: 6
Length of query: 360
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 274
Effective length of database: 1,212,660
Effective search space: 332268840
Effective search space used: 332268840
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)