BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0065.p (1504 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300313029|ref|YP_003777121.1| two component hybrid sensor his... 2887 0.0 gi|300313023|ref|YP_003777115.1| hypothetical protein Hsero_3729... 251 4e-67 gi|300310566|ref|YP_003774658.1| Hpt sensor hybrid histidine kin... 196 1e-50 gi|300312677|ref|YP_003776769.1| two component hybrid sensor his... 186 1e-47 gi|300311948|ref|YP_003776040.1| sensor histidine kinase/respons... 186 2e-47 >gi|300313029|ref|YP_003777121.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1524 Score = 2887 bits (7483), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1483/1504 (98%), Positives = 1490/1504 (99%), Gaps = 1/1504 (0%) Query: 1 MTRVTRNTVVFLLITLLFMLAGAATVRYLNERELHDSLAVDSRWIGDDIESLLRRYEHGL 60 MTRVTRNTVVFLLITLLFMLAGAATVRYLNERELHDSLAVDSRWIGDDIESLLRRYEHGL Sbjct: 22 MTRVTRNTVVFLLITLLFMLAGAATVRYLNERELHDSLAVDSRWIGDDIESLLRRYEHGL 81 Query: 61 RGERGAILAIGEHALTRERMLRYMDSRDLATEFPWAGGFGFIRHVPLSARAAYEQQVRQG 120 RGERGAILAIGEHALTRER+LRYMDSRDLATEFPWAGGFGFIRHVPLSARAAYEQQVRQG Sbjct: 82 RGERGAILAIGEHALTRERLLRYMDSRDLATEFPWAGGFGFIRHVPLSARAAYEQQVRQG 141 Query: 121 RRLFPSITQLAENPGELYVIEYIEPIEANRKALGLDIASSQARRSAADHAMLTGRAELTP 180 R LFPSITQLAENPGELYVIEYIEPIEANRKALGLDIASSQARRSAADHAMLTGRAELTP Sbjct: 142 RMLFPSITQLAENPGELYVIEYIEPIEANRKALGLDIASSQARRSAADHAMLTGRAELTP 201 Query: 181 PIHLVQKDGASANAYLFLLPIYAGSVTPPTLHERQEKIIGWAYAPLSVHDIISELSRRWK 240 PIHLVQKDGASANAYLFLLPIYAGSVTPPTLHERQEKIIGWAYAPLSVHDIISELSRRWK Sbjct: 202 PIHLVQKDGASANAYLFLLPIYAGSVTPPTLHERQEKIIGWAYAPLSVHDIISELSRRWK 261 Query: 241 THALEVLIKDAAADGDNVELFRSDGFDALAQDSGLDSALSLYGRTWKLQLRPSTDYRQTH 300 THALEVLIKDAAADGDNVELFRSDGFDALAQDSGLDSALSLYGRTWKLQLRPSTDYRQTH Sbjct: 262 THALEVLIKDAAADGDNVELFRSDGFDALAQDSGLDSALSLYGRTWKLQLRPSTDYRQTH 321 Query: 301 QFVSDRAMLLSCGSLLVLALVIALAYQTYSRREEKLQQAQALLAAVVDSSPDAIVTTDAQ 360 QFVSDRAMLLSCGSLLVLALVIALAYQTYSRREEKLQQAQALLAAVVDSSPDAIVTTDA Sbjct: 322 QFVSDRAMLLSCGSLLVLALVIALAYQTYSRREEKLQQAQALLAAVVDSSPDAIVTTDAL 381 Query: 361 GRISSWNRGAADYLPSSPAQALNTPLAQHPDLRDDLRARAASDASGQTTPHIVSLQGAPV 420 GRISSWNRGAADYLPSSPAQALNTPLAQHPDLR+ L ARAASDASGQTTPHIVSL GAPV Sbjct: 382 GRISSWNRGAADYLPSSPAQALNTPLAQHPDLRE-LDARAASDASGQTTPHIVSLHGAPV 440 Query: 421 RYASAQVFALHDRAGRAVGKAFMLRDITHEKNIERQLQRINEELEWTVQQRTQALHQAKT 480 RYASAQVFALHDRAGRAVGKAFMLRDITHEKNIERQLQRINEELEWTVQQRTQALHQAKT Sbjct: 441 RYASAQVFALHDRAGRAVGKAFMLRDITHEKNIERQLQRINEELEWTVQQRTQALHQAKT 500 Query: 481 MLQTVLNVMPSLVAYWDRHLINHFANAAYERAFQREAGQLNGVYMPDLVGPALFEKALPH 540 MLQTVLNVMPSLVAYWDRHLINHFANAAYERAFQREAGQLNGVYMPDLVGPALFEKALPH Sbjct: 501 MLQTVLNVMPSLVAYWDRHLINHFANAAYERAFQREAGQLNGVYMPDLVGPALFEKALPH 560 Query: 541 IEGVLAGAQQTFERSVDDPVLGARHMLTTYIPEIGDLGEVTGFYVVAHDVTEITHNRNQL 600 I+GVLAGAQQTFERSVDDPVLGARHMLTTYIPEIGDLGEVTGFYVVAHDVTEITHNRNQL Sbjct: 561 IKGVLAGAQQTFERSVDDPVLGARHMLTTYIPEIGDLGEVTGFYVVAHDVTEITHNRNQL 620 Query: 601 SETLAQNQSLLDQVQDANTLLNNVLSSAKGVAIIATDTEGLVTLFNSGAEQMLGYRAEDV 660 SETLAQNQSLLDQVQDANTLLNNVLSSAKGVAIIATDTEGLVTLFNSGAEQMLGYRAEDV Sbjct: 621 SETLAQNQSLLDQVQDANTLLNNVLSSAKGVAIIATDTEGLVTLFNSGAEQMLGYRAEDV 680 Query: 661 VGKLKEEHFSSRPEAALPGQDSHTELLYRRHDGATLPVARQQTSMFDHRQRHLGYLYIAL 720 VGKLKEEHFSSRPEAALPGQDSHTELLYRRHDGATLPVARQQTSMFDHRQRHLGYLYIAL Sbjct: 681 VGKLKEEHFSSRPEAALPGQDSHTELLYRRHDGATLPVARQQTSMFDHRQRHLGYLYIAL 740 Query: 721 DVSLQRQQASALAAARDQLVLAAEVAKLGVWVWDKDSDVLEYNPQVAEIYGFGDRGGAPR 780 DVSLQRQQASALAAARDQLVLAAEVAKLGVWVWDKDSDVLEYNPQVAEIYGFGDRGGAPR Sbjct: 741 DVSLQRQQASALAAARDQLVLAAEVAKLGVWVWDKDSDVLEYNPQVAEIYGFGDRGGAPR 800 Query: 781 VSTYADWRRRVHPDDVDYVEKTLRAGLAVDGDHEPVFRVVRDDGGIRYVQARAYVQRDGA 840 VSTYADWRRRVHPDDVDYVEKTLRAGLAVDGDHEPVFRVVRDDGGIRYVQARAYVQRDGA Sbjct: 801 VSTYADWRRRVHPDDVDYVEKTLRAGLAVDGDHEPVFRVVRDDGGIRYVQARAYVQRDGA 860 Query: 841 GRPVRVICINLDITQRIEFENNLVDARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQ 900 GRPVRVICINLDITQRIEFENNLVDARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQ Sbjct: 861 GRPVRVICINLDITQRIEFENNLVDARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQ 920 Query: 901 LLQRTQPLPAQQDYLDKAEISAKSLLNLLNDLLDFSKMDAKQLQLDPQAFELERFGHDLA 960 LLQRTQPLPAQQDYLDKAEISAKSLLNLLNDLLDFSKMDAKQLQLD QAFELERFGH+LA Sbjct: 921 LLQRTQPLPAQQDYLDKAEISAKSLLNLLNDLLDFSKMDAKQLQLDLQAFELERFGHNLA 980 Query: 961 AVLAGSPPQAGVRLHIALDPQLPRRLVGDAHRLQQVLVNLAGNALKFTHQGHIDVHFTRL 1020 AVLAGSPPQAGV LHIALDPQLPRRLVGDAHRLQQVLVNL GNALKFTHQGHIDVHFTRL Sbjct: 981 AVLAGSPPQAGVSLHIALDPQLPRRLVGDAHRLQQVLVNLTGNALKFTHQGHIDVHFTRL 1040 Query: 1021 DPLPGRTVALRVEVSDTGIGIAADRLDDIFDAFTQAEASTTRRYGGTGLGLAISKHLVGL 1080 DPLPGRTVALRVEVSDTGIGIAADRLDDIFDAFTQAEASTTRRYGGTGLGLAISKHLVGL Sbjct: 1041 DPLPGRTVALRVEVSDTGIGIAADRLDDIFDAFTQAEASTTRRYGGTGLGLAISKHLVGL 1100 Query: 1081 MGGQLQVSSEPGRGSRFWFDLQLAVDDDSVLGPAAADDAARPQPLQAASHTAGSRAPETA 1140 MGGQLQVSSEPGRGSRFWFDLQLAVDDDSVLGPAAADDAARPQPLQAASHTAGSRAPETA Sbjct: 1101 MGGQLQVSSEPGRGSRFWFDLQLAVDDDSVLGPAAADDAARPQPLQAASHTAGSRAPETA 1160 Query: 1141 RAAPDAQCLQGVQILLVEDNPVNRQVASELLALSGAQVTCADSGSMGVAMACDPARHFDL 1200 R+APDAQCLQGVQILLVEDNPVNRQVASELLALSGAQVTCADSGSMGVAMACDPARHFDL Sbjct: 1161 RSAPDAQCLQGVQILLVEDNPVNRQVASELLALSGAQVTCADSGSMGVAMACDPARHFDL 1220 Query: 1201 VLMDLQMPGMDGIEATRRIRGQYELRGLPILAMTANASPEDKQRCIEAGMAGHIAKPIDI 1260 VLMDLQMPGMDGIEATRRIRGQYELRGLPILAMTANASPEDKQRCIEAGMAGHIAKPIDI Sbjct: 1221 VLMDLQMPGMDGIEATRRIRGQYELRGLPILAMTANASPEDKQRCIEAGMAGHIAKPIDI 1280 Query: 1261 ATLIPVLLAHLHHERPVPEAASPPAPQDLAEDRLCVEDYSSILHRFQQASDIYRTTLDAA 1320 ATLIPVLLAHLHHERPVPEAA PQDLA+DRL VEDYSSILHRFQQASDIYRTTLDAA Sbjct: 1281 ATLIPVLLAHLHHERPVPEAAPQAVPQDLADDRLSVEDYSSILHRFQQASDIYRTTLDAA 1340 Query: 1321 GPELERLLAQYCAALAMSPVRAQEAMAALAQASHALRGVTATIGARGLAAYFGALEQRCR 1380 GPELERLLAQYCAALAMSP +AQEAMAALAQASHALRGVTATIGARGLAAYFGALEQRCR Sbjct: 1341 GPELERLLAQYCAALAMSPEQAQEAMAALAQASHALRGVTATIGARGLAAYFGALEQRCR 1400 Query: 1381 QAMAGRTPDLDWLERCRTEMDACQHDAMLVRQRLVMQALRPPASDAGPAAAALATVAASD 1440 QAMAGRTPDLDWLERCRTEMDACQHDAMLVRQRLVMQALRPPASDAGPAAAALATVAASD Sbjct: 1401 QAMAGRTPDLDWLERCRTEMDACQHDAMLVRQRLVMQALRPPASDAGPAAAALATVAASD 1460 Query: 1441 FPDRQRLRELLLSNNLEALDLIETLGKRHGLTQQEPYRQLNRLIEKLDFAAALTCLDHHF 1500 FPDRQRLRELLLSNNLEALDLIETLGKRHGLTQQEPYRQLNRLIEKLDFAAALTCLDHHF Sbjct: 1461 FPDRQRLRELLLSNNLEALDLIETLGKRHGLTQQEPYRQLNRLIEKLDFAAALTCLDHHF 1520 Query: 1501 GDAT 1504 GDAT Sbjct: 1521 GDAT 1524 >gi|300313023|ref|YP_003777115.1| hypothetical protein Hsero_3729 [Herbaspirillum seropedicae SmR1] Length = 765 Score = 251 bits (641), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 167/434 (38%), Positives = 235/434 (54%), Gaps = 48/434 (11%) Query: 860 ENNLVDARLK--AEQANSAKSLFLASVSHEIRTPMNGVLGMIQLLQRTQPLPAQQDYLDK 917 E+ L+ RLK A+ AN AKS FLA VSHEIRTPMNG+LG+ +LL + Q+DY D Sbjct: 329 EDALLATRLKEEADHANEAKSHFLAMVSHEIRTPMNGILGLSELLMESGLSSKQRDYADS 388 Query: 918 AEISAKSLLNLLNDLLDFSKMDAKQLQLDPQAFELERFGHDLAAVLAGSPPQAGVRLHIA 977 + L+ ++ND+LDFSK+++ +L L+ AF R +L+ + S + V+ + Sbjct: 389 IHGATGGLVRIINDILDFSKIESGKLDLEMVAFHPVRLVQELSDLYRPSLQRKDVQFDLH 448 Query: 978 LDPQLPRRLVGDAHRLQQVLVNLAGNALKFTHQGHIDVHFT-RLDPLPGRTVALRVEVSD 1036 LD +VGD RL+QVL NL NA+KFT GH+ + + R D L ++D Sbjct: 449 LDCPENLSVVGDPARLKQVLGNLLSNAIKFTQAGHVQLSMSARQDESGPSRWRLFFAITD 508 Query: 1037 TGIGIAADRLDDIFDAFTQAEASTTRRYGGTGLGLAISKHLVGLMGGQLQVSSEPGRGSR 1096 TGIGI+ + L +F F QA++S +RR+GGTGLGLAISK+LV LMGG + S PG +R Sbjct: 509 TGIGISPEALQQLFRPFAQADSSISRRFGGTGLGLAISKNLVELMGGTIACQSIPGESTR 568 Query: 1097 FWFDLQLAVDDDSVLGPAAADDAARPQPLQ-------------------AASHTAGSRAP 1137 F F+ +L P A+ A P+P+ A+ G+ P Sbjct: 569 FSFE---------ILCPEASTPA--PEPVSEAAAPAPATALATTAPALPPAAEAPGTLMP 617 Query: 1138 ETARAAPDAQC----------LQGVQILLVEDNPVNRQVASELLALSGAQVTCADSGSMG 1187 P + L G +IL+ ED +NRQ+ LLA G + ++G Sbjct: 618 PDNAPQPPSNVDASATVLPSLLAGARILMAEDTEINRQLLRILLARKGCILQEVENGLQA 677 Query: 1188 VAMACDPARHFDLVLMDLQMPGMDGIEATRRIRGQYELRGL---PILAMTANASPEDKQR 1244 V H+DLVLMD MP MDG +AT IR RGL PI+A+TA+A D+QR Sbjct: 678 VEAI--RTGHYDLVLMDCMMPIMDGYQATAEIRAHEAARGLPRTPIIALTASAIEGDRQR 735 Query: 1245 CIEAGMAGHIAKPI 1258 C++AGM +++KP Sbjct: 736 CLDAGMDDYLSKPF 749 >gi|300310566|ref|YP_003774658.1| Hpt sensor hybrid histidine kinase [Herbaspirillum seropedicae SmR1] Length = 723 Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 110/245 (44%), Positives = 151/245 (61%), Gaps = 1/245 (0%) Query: 861 NNLVDARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQLLQRTQPLPAQQDYLDKAEI 920 LV A+ A+ A + FL+++SHEIRTPMN VLGM LL+ T+ Q ++ E Sbjct: 71 EKLVQAKEAADHAMLTRGAFLSTMSHEIRTPMNAVLGMAGLLRSTRLDTQQAEFAKAIED 130 Query: 921 SAKSLLNLLNDLLDFSKMDAKQLQLDPQAFELERFGHDLAAVLAGSPPQAGVRLHIALDP 980 SA +LL ++ND+LDFSK+D ++ + F+L + A L+ + VRL LD Sbjct: 131 SAHALLGIVNDVLDFSKIDVGKMDIAVVEFDLAKVVEASAEALSFKAREKRVRLLAHLDS 190 Query: 981 QLPRRLVGDAHRLQQVLVNLAGNALKFTHQGHIDVHFTRLDPLPGRTVALRVEVSDTGIG 1040 +LP RLVGD R++Q+L+NL GNALKFTH G + + L + +R EV D+GIG Sbjct: 191 RLPPRLVGDPGRIRQILLNLLGNALKFTHAGEVLLRVQALQ-VTSDHCRVRFEVRDSGIG 249 Query: 1041 IAADRLDDIFDAFTQAEASTTRRYGGTGLGLAISKHLVGLMGGQLQVSSEPGRGSRFWFD 1100 + D L +F F QA++S TR+YGGTGLGL+I K LV LMGG + V S G GS FWF+ Sbjct: 250 MDEDTLRRLFSPFAQADSSVTRQYGGTGLGLSICKRLVELMGGSIGVESALGTGSCFWFE 309 Query: 1101 LQLAV 1105 L + V Sbjct: 310 LGIPV 314 Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/161 (42%), Positives = 90/161 (55%), Gaps = 10/161 (6%) Query: 1136 APETARAAPDAQCLQGVQILLVEDNPVNRQVASELLALSGAQVTCADSGSMGVAMACDPA 1195 AP T R Q ILLVEDN +N++VA L G AD + G+ A Sbjct: 464 APATPRQGHSGQ----RDILLVEDNVMNQKVAVYQLNAMG---YAADIAANGLEALERLA 516 Query: 1196 RH-FDLVLMDLQMPGMDGIEATRRIR-GQYELRGLPILAMTANASPEDKQRCIEAGMAGH 1253 RH + LVLMD QMP +DG E TRRIR Q EL I+AMTANA D++RC+EAGM + Sbjct: 517 RHRYALVLMDCQMPLLDGYETTRRIRRMQGELAHTTIVAMTANAMAGDRERCLEAGMDDY 576 Query: 1254 IAKPIDIATLIPVLLAHLHHERPVPEAASPPAPQDLAEDRL 1294 + KP+ + + + +LAH ++P APQ + EDRL Sbjct: 577 LTKPL-LRSQLSAMLAHYLPPSAASAGSAPAAPQLIDEDRL 616 >gi|300312677|ref|YP_003776769.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1160 Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 145/427 (33%), Positives = 217/427 (50%), Gaps = 38/427 (8%) Query: 863 LVDARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQLL--QRTQPLPAQQDYLDKAEI 920 LV+ + E+AN KS FLA++SHE+RTP+N L + +LL + L +Q + Sbjct: 461 LVEKATELERANQYKSEFLANMSHELRTPLNSTLILAKLLADNKQGNLSDEQVRFAQTIS 520 Query: 921 SA-KSLLNLLNDLLDFSKMDAKQLQLDPQAFELERFGHDLAAVLAGSPPQAGVRLHIALD 979 SA LL L+ND+LD SKM+A +L + P++F L + +L+A A + Q G+ + ++ Sbjct: 521 SAGNDLLALINDILDLSKMEAGKLDIVPESFPLTKLADELSASFAITAQQKGLGFKVEVE 580 Query: 980 PQLPRRLVGDAHRLQQVLVNLAGNALKFTHQGHIDVHFTRLDPLPGRTVALRVEVSDTGI 1039 P +P+R+ D RL Q+L NL NA+KFT +G + + R+ P G +A V DTGI Sbjct: 581 PGVPQRMETDIQRLGQILKNLLSNAIKFTEKGEVSL---RIYPDAGGRIAF--AVRDTGI 635 Query: 1040 GIAADRLDDIFDAFTQAEASTTRRYGGTGLGLAISKHLVGLMGGQLQVSSEPGRGSRFWF 1099 GI D+ IF+AF QA+ ST R+YGGTGLGL+IS+ L L+GG ++V+S G GS F Sbjct: 636 GIGEDQHQFIFEAFRQADGSTHRKYGGTGLGLSISRDLAHLLGGDIRVTSRLGEGSIFTL 695 Query: 1100 DL-QLAVDDDSVLGPAAADDAARPQPLQAASHTAGSRAPET------ARAAPDAQCLQGV 1152 L L + +V A A + AP+ A AAP Q LQ + Sbjct: 696 SLPPLYSSEQAVSNTAPEPTPAAAAAASTLQAAHVATAPDVRINRTPAAAAP--QRLQEI 753 Query: 1153 Q--------------ILLVEDNPVNRQVASELLALSGAQVTCADSGSMGVAMACDPARHF 1198 IL++ED+ + +L G Q S + GVA A Sbjct: 754 SIDDDRDRIETSSRLILVIEDDAAFAMILRDLAREMGFQCVVTHSANEGVAAA--EMYRP 811 Query: 1199 DLVLMDLQMPGMDGIEATRRIRGQYELRGLPI-LAMTANASPEDKQRCIEAGMAGHIAKP 1257 +LMD+ +P G+ +I+ + R +P+ + A+ S E +E G G+ KP Sbjct: 812 SAILMDMNLPDFSGLGVLDQIKRNPKTRHIPVHVVSVADYSHE----AMERGAIGYALKP 867 Query: 1258 IDIATLI 1264 + LI Sbjct: 868 VQREELI 874 Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%) Query: 1148 CLQGVQILLVEDNPVNRQVASELLALSGAQVTCADSGSMGVAMAC----DPARHFDLVLM 1203 +G +IL+VED+ N S +L G +V A +G + P DLVLM Sbjct: 1031 VFEGRRILVVEDDVRNIFALSSVLEPKGMKVEIARNGREALQALQRSQDKPDAPIDLVLM 1090 Query: 1204 DLQMPGMDGIEATRRIRGQYELRGLPILAMTANASPEDKQRCIEAGMAGHIAKPIDIATL 1263 D+ MP MDG+ A R IR Q + LPI+A+TA A +D+++C+ AG +IAKP+D+ L Sbjct: 1091 DIMMPEMDGLTAMREIRKQAVWKRLPIIALTAKAMKDDQEKCLAAGANDYIAKPLDVEKL 1150 Query: 1264 IPVL 1267 + ++ Sbjct: 1151 LSLV 1154 >gi|300311948|ref|YP_003776040.1| sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 1145 Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 142/413 (34%), Positives = 211/413 (51%), Gaps = 45/413 (10%) Query: 866 ARLKAEQANSAKSLFLASVSHEIRTPMNGVLGMIQLLQ--RTQPLPAQQDYLDKAEISAK 923 A+ AE AN AKS F+A +SHE+RTP+N +LG Q+L T P PA++D + S + Sbjct: 677 AKEAAESANLAKSRFVAGMSHELRTPLNSILGYAQILHVDATIP-PARKDAIGVIRRSGE 735 Query: 924 SLLNLLNDLLDFSKMDAKQLQLDPQAFELERFGHDLAAVLAGSPPQAGVRLHIALDPQLP 983 LL+L++ LLD +K++A +++L LE F + + A Q G+ +LP Sbjct: 736 HLLSLIDGLLDIAKIEAGKMRLASDELALEAFLEQIVGMFAPQAEQKGLHFRFDKSGRLP 795 Query: 984 RRLVGDAHRLQQVLVNLAGNALKFTHQGHIDVHFTRLDPLPGRTVALRVEVSDTGIGIAA 1043 + + D RL+Q+L+NL GNA+KFT G + + R +A +V DTGIGIA Sbjct: 796 QIVHADQKRLRQILINLLGNAVKFTDHGGVTLRLRY-----AREIA-YFDVIDTGIGIAD 849 Query: 1044 DRLDDIFDAFTQAEASTTRRYGGTGLGLAISKHLVGLMGGQLQVSSEPGRGSRFWFDLQL 1103 D + IF F ++ A+ R GTGLGLAIS+ LV +MGG+L V S+ G+GS F + L Sbjct: 850 DDRERIFLPFERSSAANLREDIGTGLGLAISRMLVHIMGGELSVQSQVGQGSSFHLKIYL 909 Query: 1104 AVDDDSVLGPAAADDAARPQP-LQAASHTAGSRAPETARAAPDAQCLQGVQILLVEDNPV 1162 + P+P ++ +G P IL+V+D Sbjct: 910 -------------PEVHVPRPRIKLEDQMSGYAGPSR-------------HILVVDDQAS 943 Query: 1163 NRQVASELLALSGAQVTCADSGSMGVAMAC-DPARHF--DLVLMDLQMPGMDGIEATRRI 1219 R++ ++L G V+ ADSG +AC + H DLVL+D+ MP MDG R I Sbjct: 944 QRRLLKDMLMPLGFTVSEADSG-----LACMETLGHALPDLVLLDIAMPQMDGWSVARAI 998 Query: 1220 RGQYELRGLPILAMTANASPEDKQRCIEAGMAGHIAKPIDIATLIPVLLAHLH 1272 R + L LPIL ++ANA +R + + KP+ L+ + HL Sbjct: 999 RAR-GLAQLPILLVSANAFENLHERNEPPLVNDFVVKPVSYHELLGKIRQHLQ 1050 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.320 0.134 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 4,359,785 Number of extensions: 179509 Number of successful extensions: 909 Number of sequences better than 1.0e-08: 51 Number of HSP's gapped: 890 Number of HSP's successfully gapped: 53 Length of query: 1504 Length of database: 1,619,870 Length adjustment: 98 Effective length of query: 1406 Effective length of database: 1,155,840 Effective search space: 1625111040 Effective search space used: 1625111040 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 137 (57.4 bits)