BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0032.p
         (324 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313066|ref|YP_003777158.1| drug/metabolite transporter (DM...   615   e-177

>gi|300313066|ref|YP_003777158.1| drug/metabolite transporter (DMT)
           superfamily permease [Herbaspirillum seropedicae SmR1]
          Length = 324

 Score =  615 bits (1585), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 321/324 (99%), Positives = 321/324 (99%)

Query: 1   MSTAVATPTVPAAAARPAASSPAPAPMSRLFLVCVVLAICIWGGNWPVMKFGSQFIPPLW 60
           MSTAVATPTVPAAAARPAA SPAPA MSRLFLVCVVLAICIWGGNWPVMKFGSQFIPPLW
Sbjct: 1   MSTAVATPTVPAAAARPAALSPAPASMSRLFLVCVVLAICIWGGNWPVMKFGSQFIPPLW 60

Query: 61  FAASRFLSAAILSFVIAVVLCKLRLPTRQEWPVVVGVGVLQMGLFTALVTGALHFVMPGR 120
           FAASRFLSAAILSFVIAVVL KLRLPTRQEWPVVVGVGVLQMGLFTALVTGALHFVMPGR
Sbjct: 61  FAASRFLSAAILSFVIAVVLGKLRLPTRQEWPVVVGVGVLQMGLFTALVTGALHFVMPGR 120

Query: 121 ASLIAYATSIWVVPGAALVLKQKLSPQQSLATVCSYAGMAVIVLPALLHADLHSMIGYLM 180
           ASLIAYATSIWVVPGAALVLKQKLSPQQSLATVCSYAGMAVIVLPALLHADLHSMIGYLM
Sbjct: 121 ASLIAYATSIWVVPGAALVLKQKLSPQQSLATVCSYAGMAVIVLPALLHADLHSMIGYLM 180

Query: 181 LGVASLSWAMNILQIKMSPGVKLDFALLPWQTLVAALPLSLLALAVDGAPSFLADPHAWG 240
           LGVASLSWAMNILQIKMSPGVKLDFALLPWQTLVAALPLSLLALAVDGAPSFLADPHAWG
Sbjct: 181 LGVASLSWAMNILQIKMSPGVKLDFALLPWQTLVAALPLSLLALAVDGAPSFLADPHAWG 240

Query: 241 VIAYTGPLATALTFLIVLQMTQRLSPVTVSVCMLGVPVVGLTLSSLVFGERLSSDLVLGM 300
           VIAYTGPLATALTFLIVLQMTQRLSPVTVSVCMLGVPVVGLTLSSLVFGERLSSDLVLGM
Sbjct: 241 VIAYTGPLATALTFLIVLQMTQRLSPVTVSVCMLGVPVVGLTLSSLVFGERLSSDLVLGM 300

Query: 301 GLLCLGLVLPALPSLGLRRLATKG 324
           GLLCLGLVLPALPSLGLRRLATKG
Sbjct: 301 GLLCLGLVLPALPSLGLRRLATKG 324


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.327    0.138    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 792,824
Number of extensions: 28390
Number of successful extensions: 151
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 153
Number of HSP's successfully gapped: 3
Length of query: 324
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 239
Effective length of database: 1,217,395
Effective search space: 290957405
Effective search space used: 290957405
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 131 (55.1 bits)