BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0121.p
         (739 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300312241|ref|YP_003776333.1| subtilisin-like serine protease...  1506   0.0  

>gi|300312241|ref|YP_003776333.1| subtilisin-like serine protease
           [Herbaspirillum seropedicae SmR1]
          Length = 739

 Score = 1506 bits (3898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 733/739 (99%), Positives = 735/739 (99%)

Query: 1   MKTTITLLTALLGAAAMEQAHAAGATPKPAGYIEQLEITQTADAFGGATPAGAAGPYQLV 60
           MKTTITLLTALLGAAAMEQAHAAGAT KPAGYIEQLEITQTADAFGGATPAGAAGPYQLV
Sbjct: 1   MKTTITLLTALLGAAAMEQAHAAGATLKPAGYIEQLEITQTADAFGGATPAGAAGPYQLV 60

Query: 61  SGIVHGKLDAHHPDNAMITDLDKAPRDAHGYVSYTTDFVILRPKSAAQARRVLFYDVANR 120
           SGIVHGKLDAHHPDNAMITDLDKAPRDAHGYVSYTTDFVILRPKSAAQARRVLFYDVANR
Sbjct: 61  SGIVHGKLDAHHPDNAMITDLDKAPRDAHGYVSYTTDFVILRPKSAAQARRVLFYDVANR 120

Query: 121 GRKLAEEFFIGGKSLRNGPAPGDNYPSLLRAGYTIVWSGWQGDLKQSGAAIDGALGTRFP 180
           GRKLAEEFFIGGKSLRNGPAPGDNYPSLLRAGYTIVWSGWQGDLKQSGAAIDGALGTRFP
Sbjct: 121 GRKLAEEFFIGGKSLRNGPAPGDNYPSLLRAGYTIVWSGWQGDLKQSGAAIDGALGTRFP 180

Query: 181 VVANKDGSAITGLSREEYIPDFHQGHKEFKLAYPPASLRDKSQVSFTVRQTWRNAQGQQD 240
           VVANKDGSAITGLSREEYIPDFHQGHKEFKLAYPPASLRDKSQVSFTVRQTWRN QGQQD
Sbjct: 181 VVANKDGSAITGLSREEYIPDFHQGHKEFKLAYPPASLRDKSQVSFTVRQTWRNGQGQQD 240

Query: 241 YQAPSAPVTEWHYEPKADGSVSVVFTPPSAVPGPAGTSVPADQGSIYSFVYPASHPRVMA 300
           YQAPSAPVTEWHYEPKADGSVSVVFTPPSAVPGPAGTSVPADQGSIYSFVYPASHPRVMA
Sbjct: 241 YQAPSAPVTEWHYEPKADGSVSVVFTPPSAVPGPAGTSVPADQGSIYSFVYPASHPRVMA 300

Query: 301 IGFAAVRDLVSFLRDASADAKGAANPLNDMKDAACVSQQACTAHDKRNFDLTIGEGISQS 360
           IGFAAVRDLVSFLRDASADAKGAANPLNDMKDAACVSQQACTAHDKRNFDLTIGEGISQS
Sbjct: 301 IGFAAVRDLVSFLRDASADAKGAANPLNDMKDAACVSQQACTAHDKRNFDLTIGEGISQS 360

Query: 361 GRFMRDFLYMGFNKNAQGNKVFDGMIAIIPGGRRTWINERFSQPGRWSKGHEEHWMPGDQ 420
           GRFMRDFLYMGFNKNAQGNKVFDGMIAIIPGGRRTWINERFSQPGRWSKGHEEHWMPGDQ
Sbjct: 361 GRFMRDFLYMGFNKNAQGNKVFDGMIAIIPGGRRTWINERFSQPGRWSKGHEEHWMPGDQ 420

Query: 421 FPFAYNVMQDPVSGVTDGLLKQCSASMTCPKIMQIDGSFEWWGGRGALVVTDGAGKDLTL 480
           FPFAYNVMQDPVSGVTDGLLKQCSASMTCPKIMQIDGSFEWWGGRGALVVTDGAGKDLTL
Sbjct: 421 FPFAYNVMQDPVSGVTDGLLKQCSASMTCPKIMQIDGSFEWWGGRGALVVTDGAGKDLTL 480

Query: 481 PDNVRYYLISGTQHAGGPGIKNGVVKQNGQDSMCQFPPSPVTQAPVLRAMIPAMENWLAK 540
           PDNVRYYLISGTQHAGGPGIKNGVVKQNGQDSMCQFPPSPVTQAPVLRAMIPAMENWLAK
Sbjct: 481 PDNVRYYLISGTQHAGGPGIKNGVVKQNGQDSMCQFPPSPVTQAPVLRAMIPAMENWLAK 540

Query: 541 GQLPPPSRYPTVTGGTAVTPDQASVGFPALDNVLAPLANAAGTVTPTELHLSYSGIHNPL 600
           GQLPPPSRYPTV+ GTAVTPDQASVGFPALDNVLAPLANAAGTV PTELHLSYSGIHNPL
Sbjct: 541 GQLPPPSRYPTVSDGTAVTPDQASVGFPALDNVLAPLANAAGTVRPTELHLSYSGIHNPL 600

Query: 601 AVTDYRAAIPVADPTRPYRILVPKVDADGNELGGIAQPEVAVPLATYTGWNLRAAGHAQG 660
           AVTDYRAAIPVADPTRPYRILVPKVDADGNELGGIAQPEVAVPLATYTGWNLRAAGHAQG
Sbjct: 601 AVTDYRAAIPVADPTRPYRILVPKVDADGNELGGIAQPEVAVPLATYTGWNLRAAGHAQG 660

Query: 661 ETCSSLGSAIPFAVSGATRSSSDPRPALDQRYQGRADYAAQVKAAGDKLVQEGYLLPLDA 720
           ETCSSLGSAIPFAVSGATRSSSDPRPALDQRYQGRADYAAQVKAAGD+LVQEGYLLPLDA
Sbjct: 661 ETCSSLGSAIPFAVSGATRSSSDPRPALDQRYQGRADYAAQVKAAGDRLVQEGYLLPLDA 720

Query: 721 EHIFAAHARQVSPQLIPQP 739
           EHIFAAHARQVSPQLIPQP
Sbjct: 721 EHIFAAHARQVSPQLIPQP 739


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.317    0.134    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,570,835
Number of extensions: 119989
Number of successful extensions: 349
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 349
Number of HSP's successfully gapped: 1
Length of query: 739
Length of database: 1,619,870
Length adjustment: 92
Effective length of query: 647
Effective length of database: 1,184,250
Effective search space: 766209750
Effective search space used: 766209750
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 134 (56.2 bits)