BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0098.p (922 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300312208|ref|YP_003776300.1| assimilatory nitrate reductase ... 1887 0.0 gi|300310808|ref|YP_003774900.1| NAD-dependent formate dehydroge... 292 9e-80 gi|300313158|ref|YP_003777250.1| anaerobic dehydrogenase family ... 122 1e-28 gi|300310774|ref|YP_003774866.1| anaerobic formate dehydrogenase... 106 1e-23 gi|300311015|ref|YP_003775107.1| anaerobic (selenocysteine-conta... 96 2e-20 >gi|300312208|ref|YP_003776300.1| assimilatory nitrate reductase large subunit [Herbaspirillum seropedicae SmR1] Length = 922 Score = 1887 bits (4887), Expect = 0.0, Method: Compositional matrix adjust. Identities = 918/922 (99%), Positives = 920/922 (99%) Query: 1 MNLSQTPLALAVATTSTTCPYCGVGCGVNASMKDDGRIGIQGDAQHPANFGRLCVKGSAL 60 MNLSQTPLALAVATTSTTCPYCGVGCGV+ASMKDDGRIGIQGDAQHPANFGRLCVKGSAL Sbjct: 1 MNLSQTPLALAVATTSTTCPYCGVGCGVSASMKDDGRIGIQGDAQHPANFGRLCVKGSAL 60 Query: 61 GETVDLDGRLLHPQLRDAQGQLQPLAWDQALDHVASKFSAIIAEHGPDAVALYVSGQLLT 120 GETVDLDGRLLHPQLRDAQGQLQ LAWDQALDHVASKFSAIIAEHGPDAVALYVSGQLLT Sbjct: 61 GETVDLDGRLLHPQLRDAQGQLQQLAWDQALDHVASKFSAIIAEHGPDAVALYVSGQLLT 120 Query: 121 EDYYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELTDLVVLVG 180 EDYYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLEL DLVVLVG Sbjct: 121 EDYYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELADLVVLVG 180 Query: 181 SNAAWCHPILFQRIARLKETRPALRLVVIDPRRTATCELADLHLPIKPGTDVWLFNGLMS 240 SNAAWCHPILFQRIARLKETRPALRLVVIDPRRTATCELADLHLPIKPGTDVWLFNGLMS Sbjct: 181 SNAAWCHPILFQRIARLKETRPALRLVVIDPRRTATCELADLHLPIKPGTDVWLFNGLMS 240 Query: 241 YLAHRGLRDNAFIEAHTKGFDEALAVADADCADPATVARLCKIDLKDLLAFYEAFANTEK 300 YLAHRGLRDNAFIEAHTKGFDEALAVADADCADPATVARLCKIDLKDLLAFYEAFANTEK Sbjct: 241 YLAHRGLRDNAFIEAHTKGFDEALAVADADCADPATVARLCKIDLKDLLAFYEAFANTEK 300 Query: 301 VVTGFSMGVNQSSAGTDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANM 360 VVTGFSMGVNQSSAGTDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANM Sbjct: 301 VVTGFSMGVNQSSAGTDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLANM 360 Query: 361 LAAHMDLDQPLHRQIVQDFWQSPRIADKPGLKAVDMFRAIEEGRIKAVWIMATNPMVSLP 420 LAAHMDLDQPLHRQIVQDFWQSPRIADKPGLKAVDMFRAIEEGRIKAVWIMATNPMVSLP Sbjct: 361 LAAHMDLDQPLHRQIVQDFWQSPRIADKPGLKAVDMFRAIEEGRIKAVWIMATNPMVSLP 420 Query: 421 DADLVQRALQKCELVVSSDVITQTDTNALAHVLLPALAWGEKDGTVTNSERRISRQRAFL 480 DADLVQRALQKCELVVSSDVITQTDTNALAHVLLPALAWGEKDGTVTNSERRISRQRAFL Sbjct: 421 DADLVQRALQKCELVVSSDVITQTDTNALAHVLLPALAWGEKDGTVTNSERRISRQRAFL 480 Query: 481 SAPGEARGDWRIICDVARRMGFDGFDFAGPHEIFDEHARLSAHRNGEADASRVRRVFNLA 540 SAPGEARGDWRIICDVARRMGFDGFDFAGPHEIFDEHARLSAHRNGEADASRVRRVFNLA Sbjct: 481 SAPGEARGDWRIICDVARRMGFDGFDFAGPHEIFDEHARLSAHRNGEADASRVRRVFNLA 540 Query: 541 GLTGMDRAAYDALAPIQWPVQRLSDGSVSGTARVLEDHRFSHADGRARFVPTAPRSAAHA 600 GLTGMDRAAYDALAPIQWPVQRLSDGSVSGTARVLEDHRFSHADGRARFVPTAPRSAAHA Sbjct: 541 GLTGMDRAAYDALAPIQWPVQRLSDGSVSGTARVLEDHRFSHADGRARFVPTAPRSAAHA 600 Query: 601 ACEEYPLILNTGRVRDHWHTMTRTGRSATLASHIPESFIDIHPQDALLYGVREGGLARIS 660 ACE+YPLILNTGRVRDHWHTMTRTGRSATLASHIPESFIDIHPQDALLYGVREGGLARIS Sbjct: 601 ACEDYPLILNTGRVRDHWHTMTRTGRSATLASHIPESFIDIHPQDALLYGVREGGLARIS 660 Query: 661 SRWGAMVARVQHGGGIARGSVFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPVA 720 SRWGAMVARVQHGGGIARGSVFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPVA Sbjct: 661 SRWGAMVARVQHGGGIARGSVFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPVA 720 Query: 721 IEEFRVSWHGFILTRHALDLDQVTHWTRVQGRDFMRYELAGRNHIPDHSAWARSLLGVQD 780 IEEFRVSWHGFILTRHALDLDQVTHWTRVQGRDFMRYELAGRNHIPDHSAWARSLLGVQD Sbjct: 721 IEEFRVSWHGFILTRHALDLDQVTHWTRVQGRDFMRYELAGRNHIPDHSAWARSLLGVQD 780 Query: 781 PQADWLEYEDLSDGSYRAVHVVEDRIDMCLFMSARPDLPSRSWLAGLFAKEKLEEADRVG 840 PQADWLEYEDLSDGSYRAVHVVEDRIDMCLFMSARPDLPSRSWLAGLFAKEKLEEADRVG Sbjct: 781 PQADWLEYEDLSDGSYRAVHVVEDRIDMCLFMSARPDLPSRSWLAGLFAKEKLEEADRVG 840 Query: 841 LLVGQPIEKGADTGPTVCSCFGVGRNTICNAIRTQGLSEVGQVTACLKAGGNCGSCVPEI 900 LLVGQPIEKGADTGPTVCSCFGVGRNTICNAIRTQGLSEVGQVTACLKAGGNCGSCVPEI Sbjct: 841 LLVGQPIEKGADTGPTVCSCFGVGRNTICNAIRTQGLSEVGQVTACLKAGGNCGSCVPEI 900 Query: 901 KKLIVEVRLQDAAELREGAKAA 922 KKLIVEVRLQDAAELREGAKAA Sbjct: 901 KKLIVEVRLQDAAELREGAKAA 922 >gi|300310808|ref|YP_003774900.1| NAD-dependent formate dehydrogenase subunit alpha [Herbaspirillum seropedicae SmR1] Length = 957 Score = 292 bits (747), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 205/722 (28%), Positives = 333/722 (46%), Gaps = 45/722 (6%) Query: 8 LALAVATTSTTCPYCGVGCGVNASMKDDGRIGIQGDAQHPANFGRLCVKGS-ALGETVDL 66 L A + TTC YCGVGC A MK + + + AN G CVKG A G Sbjct: 237 LGQAEHSKVTTCAYCGVGCSFKAEMKGNEVVRMVPYKDGKANQGHSCVKGRFAWGYATHK 296 Query: 67 DGRLLHPQLRDA-QGQLQPLAWDQALDHVASKFSAIIAEHGPDAVALYVSGQLLTEDYYI 125 D R+L+P +R + + ++W++AL + AS+F I A+HG D++ S + E+ Y+ Sbjct: 297 D-RILNPMIRKSINDPWREVSWEEALSYAASEFRRIQAKHGKDSIGGITSSRCTNEETYL 355 Query: 126 ANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELTDLVVLVGSNAAW 185 KL++ G+ N+DT +R+C S G K+ GE +E + +D+++++G+N A Sbjct: 356 VQKLVRAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQTFESVMKSDVILIMGANPAA 415 Query: 186 CHPILFQRIARLKETRPALRLVVIDPRRTATCE----LADLHLPIKPGTDVWLFNGLMSY 241 HP+ +I R R +L+VIDPR T + AD HL ++PGT+ + L Sbjct: 416 GHPVFASQIKR--RVRQGAKLIVIDPRTTEMVKSPHIQADYHLKLRPGTNTAIITALAHV 473 Query: 242 LAHRGLRDNAFIEAHT--KGFDEALAVADADCADPATVARLCKIDLKDLLAFYEAFANTE 299 + GL+D A+I+ + + + + P +A + + + + +A Sbjct: 474 ILSEGLQDEAYIQERCDLQSYQDWKEFVLREDNSPEAMAAITGVPAEIIRGAARLYATGG 533 Query: 300 KVVTGFSMGVNQSSAGTDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLAN 359 + +GV + + G+ V I N + TG +G+ G+G + GQ N G ++G + Sbjct: 534 NAAIYYGLGVTEHAQGSTTVMGIANLAMCTGNVGREGVGVNPLRGQNNVQGSCDMGSFPH 593 Query: 360 MLAAHMDLDQPLHRQIVQDFWQSPRIADKPGLKAVDMFRAIEEGRIKAVWIMATNPMVSL 419 L + + R + W + +PGL+ +MF A +G K ++ + + S Sbjct: 594 ELPGYRHISDSTVRNQFEQAW-GVTLNPEPGLRIPNMFDAALDGSFKGLYCEGEDIVQSD 652 Query: 420 PDADLVQRALQKCELVVSSDVITQTDTNALAHVLLPALAWGEKDGTVTNSERRISRQRAF 479 P+ V ALQ E +V D+ +T AHV LP ++ EKDGT TN+ERRISR R Sbjct: 653 PNTQHVAAALQAMECIVVQDLFLN-ETAKYAHVFLPGSSFLEKDGTFTNAERRISRVRKV 711 Query: 480 LSAPGEARGDWRIICDVARRMGFDGFDFAGPHEIFDEHARLSAHRNGEADASRVRRVFNL 539 + P + DW + +A +G+ + P EI DE A L+ Sbjct: 712 M-PPKAGKSDWEVTVALAEALGYP-MPYNHPSEIMDEIAALT------------------ 751 Query: 540 AGLTGMDRAAYDALAPIQWPVQRLSDGSVSGTARVLEDHRFSHADGRARFVPTAPRSAAH 599 G+ + L IQWP ++ + GT + H S G+ +F+ T + Sbjct: 752 PSFHGVSYDKLEKLGSIQWPC---NESAPEGTPIM---HVGSFIRGKGKFINTQYFATDE 805 Query: 600 AACEEYPLILNTGRVRDHWHTMTRTGRSATLASHIPESFIDIHPQDALLYGVREGGLARI 659 + YPLIL TGR+ ++ +T R+ H E ++IHP DA G+REG + Sbjct: 806 KVTQRYPLILTTGRILSQYNVGAQTRRTENSQWH-SEDRLEIHPHDAEDRGIREGDWVGV 864 Query: 660 SSRWGAMVARVQHGGGIARGSVFVPIHWNGQSASDARVGAVVNPVVDPVSGEPEFKHTPV 719 SR G V R + G V+ H+ A+ + D + PE+K T V Sbjct: 865 ESRAGQTVLRATVTEKVQPGVVYTTFHFPESGAN-----VITTDNSDWATNCPEYKVTAV 919 Query: 720 AI 721 + Sbjct: 920 QV 921 >gi|300313158|ref|YP_003777250.1| anaerobic dehydrogenase family protein [Herbaspirillum seropedicae SmR1] Length = 701 Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 173/732 (23%), Positives = 295/732 (40%), Gaps = 74/732 (10%) Query: 19 CPY-CGVGCGVNASMKDDGRIGIQGDAQHPANFGRLCVKGSALGETVDLDGRLLHPQLR- 76 CP+ C C + ++KD ++GD HP G LC K S E RLLHP R Sbjct: 10 CPHDCPDTCALLVTVKDGVATEVRGDPAHPPTAGVLCTKVSRYAERTYHPDRLLHPMRRV 69 Query: 77 --DAQGQLQPLAWDQALDHVASKFSAIIAEHGPDAVALY----VSGQLLTEDYYIANKLM 130 +G+ + ++WD+A+ +A + I A P A+ Y GQ+ E +A + Sbjct: 70 GKKGEGKFERISWDEAIATIAQRLGQI-ALRDPQAILPYSYAGTMGQVQGES--MAGRFF 126 Query: 131 KGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELTDLVVLVGSNAAWCHPIL 190 +G++ ++ +C S+ AG++ G V E ++ L+++ G N + Sbjct: 127 H-RLGASQLERT--ICASAGGAGYRYTIGAR-VGADLEQVDHAKLILIWGGNPIASNLHF 182 Query: 191 FQRIARLKETRPALRLVVIDPRRTATCELADLHLPIKPGTDVWLFNGLMSYLAHRGLRDN 250 + R+ K R RL+ IDP R+ T E H+ + PGTD L G+M L L D+ Sbjct: 183 WTRVQTAK--RNGARLIAIDPYRSLTAEKCHQHIALLPGTDAALALGMMHVLISEDLLDH 240 Query: 251 AFIEAHTKGFDEALAVADADCADPATVARLCKIDLKDLLAFYEAFANT----EKVVTGFS 306 +I HT GF E L A+ PA A +C I +++L + E V + Sbjct: 241 DYIARHTLGF-EQLRERVAEWT-PARTAEVCGISAEEVLNLAREYGRVALAGEGVFIRAN 298 Query: 307 MGVNQSSAGTDKVNSIINCHLATGRIGKPGMGPFSITGQPNAMGGREVGGLA--NMLAAH 364 G+ + G ++ G P G + + ++ L+ ++ A H Sbjct: 299 YGLQRVRGGGMAARNVACLPALVGAWRHPAGG---VQMSVSDSFPKDAAALSRPDLAAGH 355 Query: 365 MDLDQPLHRQIVQDFWQSPRIADKPGLKAVDMFRAIEEGRIKAVWIMATNPMVSLPDADL 424 + ++ + D P AD +++A+ + +NP+ P++ Sbjct: 356 GKPARVINMSTIGDALLHPASADF-------------GPKVEALIVYNSNPVAVAPESAK 402 Query: 425 VQRALQKCELVVSSDVITQTDTNALAHVLLPALAWGEK-DGTVTNSERRISRQRAFLSAP 483 V + + +L QTDT A +LLPA E D + I A ++ Sbjct: 403 VAQGFAREDLFTVVLEHFQTDTADYADILLPATTQLEHIDVHASYGHVYIMANNAAIAPM 462 Query: 484 GEARGDWRIICDVARRMGFDGFDFAGPHEIFDEHARLSAHRNGEADASRVRRVFNLAGLT 543 GEA+ + I +A MGF F + D+ A ++ R+ A Sbjct: 463 GEAKPNTEIFRRLAAAMGFTEDCF---QDSDDQLAAVAFKRDDPRSA------------- 506 Query: 544 GMDRAAYDALAPIQW-----PVQRLSDG---SVSGTARVL-EDHRFSHADGRARFVPTAP 594 G D ++ L W PV ++G + SG E + + D ++P Sbjct: 507 GYD---WEQLKQKGWQRLAVPVAPFAEGGFATPSGKCEFYSEQMKAAGLDPLPAYIPPYE 563 Query: 595 RSAAHAA-CEEYPLILNTGRVRDHWHTMTRTGRSATLASHIPESFIDIHPQDALLYGVRE 653 A++ YPL + + R+ ++ +S L E +D+HPQDA G+ + Sbjct: 564 SVASNPQLAARYPLAMISPPARNFLNSSFVNVQS--LRDTEGEPHLDMHPQDAAARGISQ 621 Query: 654 GGLARISSRWGAMVARVQHGGGIARGSVF-VPIHWNGQSASDARVGAVVNPVVDPVSGEP 712 G + RI + G++ ARV+ G V + I W +A V + + + P Sbjct: 622 GDMVRIFNDRGSLQARVRVTDKARVGLVVGLSIWWKKFAADGKNANEVTSQRLTDMGHAP 681 Query: 713 EFKHTPVAIEEF 724 F V +E+ Sbjct: 682 TFYDVLVQVEKL 693 >gi|300310774|ref|YP_003774866.1| anaerobic formate dehydrogenase [Herbaspirillum seropedicae SmR1] Length = 790 Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 105/434 (24%), Positives = 179/434 (41%), Gaps = 55/434 (12%) Query: 64 VDLDGRLLHPQLRDAQG-QLQPLAWDQALDHVASKFSAIIAEHGPDAVALYVSGQLLTED 122 ++ GR+ P DA + P++W +A D +A++ A+ P V Y SG+ E Sbjct: 127 LESSGRVTEPMKYDAASDRYLPVSWSEAFDDIAAQLRAM----DPKKVVFYASGRASLET 182 Query: 123 YYIANKLMKGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELTDLVVLVGSN 182 Y+ +LM G+ N+ +S +C S + G + V +D TD ++ G N Sbjct: 183 SYLY-QLMARMYGTNNLPDSSNMCHESTSVALPQTIGVPVGTVTLDDFGQTDCILFFGHN 241 Query: 183 AAWCHPILFQRIARLKETRPALRLVVIDPRRT------------------ATCELADLHL 224 P + + +++ + ++ +P R A +++ +L Sbjct: 242 TGTNAPRMLHPLEEVRKR--GVPVITFNPLRERGLERFVNPQSPKEMVTPAHTDISTQYL 299 Query: 225 PIKPGTDVWLFNGLMSYLAHRG----------LRDNAFIEAHTKGFDEALAVADADCADP 274 IK G D G+ + R L D AFIE HT GF++ ADA A P Sbjct: 300 QIKIGGDSAAAIGMAKRILERDDKARQEGLPRLLDLAFIEEHTSGFEQ---FADAVRAAP 356 Query: 275 -ATVARLCKIDLKDLLAFYEAFANTEKVVTGFSMGVNQSSAGTDKVNSIINCHLATGRIG 333 + R + +L + +A + + + MGV Q ++ + N L G IG Sbjct: 357 WDELERHAGVSRAELELAADTYAGAGRAMLMYGMGVTQHREAVRTIHMLTNLLLMRGNIG 416 Query: 334 KPGMGPFSITGQPNAMGGREVGGLANMLAAHMDLDQPLHRQIVQDFWQSPRIADKPGLKA 393 KPG G I G N G R VG D + L+ ++ P + GL Sbjct: 417 KPGAGICPIRGHSNVQGQRTVGITEKPELVPNDKLRALYH------FEPPM---EKGLNT 467 Query: 394 VDMFRAIEEGRIKAVWIMATNPMVSLPDADLVQRALQKCELVVSSDVITQTDTNALAH-- 451 V+ I +G + A +++ N + ++PD +++ A +K L V V+T + + + H Sbjct: 468 VEACEKIRDGELSAFFMLGGNFVRAIPDHGVMEAAWRKLPLTVQ--VVTHFNRSCVIHGQ 525 Query: 452 --VLLPALAWGEKD 463 +LP L E D Sbjct: 526 TSYVLPCLGRIEID 539 >gi|300311015|ref|YP_003775107.1| anaerobic (selenocysteine-containing) formate dehydrogenase [Herbaspirillum seropedicae SmR1] Length = 775 Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 115/487 (23%), Positives = 190/487 (39%), Gaps = 69/487 (14%) Query: 16 STTCPYCGVGCGVNASMKDDGRIGIQGDAQHPANFGRLCVKGSALGETVDLD----GRLL 71 ++T +C G A+ R+ + AQH + L + D + GRL Sbjct: 63 TSTFEFCENGVKAVAAEATKKRVTPEFFAQHTV---------TELMQQSDFELEEHGRLT 113 Query: 72 HPQLRDA-QGQLQPLAWDQALDHVASKFSAIIAEHGPDAVALYVSGQLLTEDYYIANKLM 130 HP + DA + + + W A +A +A+ PD YVSG+ E ++ + Sbjct: 114 HPMVYDAATDKYKKIEWADAFALMAKHLNAL---PDPDMADFYVSGRASNEAAFLFQLFV 170 Query: 131 KGYIGSANIDTNSRLCMSSAVAGHKRAFGEDLVPVCYEDLELTDLVVLVGSNAAWCHPIL 190 + Y G+ N S +C G G V ED + D ++L G N A HP + Sbjct: 171 RQY-GTNNFPDCSNMCHEPTSVGLPGTVGIGKGTVLLEDFDHCDTLLLFGQNPATNHPRM 229 Query: 191 FQRIARLKETRPALRLVVIDPRRTATCE------------------LADLHLPIKPGTDV 232 + R R A +V I+P + E ++ + + G D+ Sbjct: 230 MGEL-RHASKRGAT-IVAINPLKERGLERFADPQSKVEMLTMGSTRISSMFIHPTLGGDL 287 Query: 233 WLFNGLMSYL-----------AHRGLRDNAFIEAHTKGFDEALAVADADCADPATVARLC 281 L G++ A R + D FIE HT GF+E A A A+ D + Sbjct: 288 ALIKGVIKRTIELDDAARAAGAERVI-DVKFIEEHTAGFEEFAAQARAESWD--DIVAES 344 Query: 282 KIDLKDLLAFYEAFANTEKVVTGFSMGVNQSSAGTDKVNSIINCHLATGRIGKPGMGPFS 341 + +D+ + + + V+ + MG+ Q + + N + G IG+ G G Sbjct: 345 GVSREDIEKLAQVYVKGKAVIATWGMGLTQHKHAVATIQLLSNMMMLRGNIGRQGAGLCP 404 Query: 342 ITGQPNAMGGREVGGLANMLAAHMDLDQPLHRQIVQDF-WQSPRIADKPGLKAVDMFRAI 400 + G N G R VG A +D ++ Q F +++PR G V A+ Sbjct: 405 VRGHSNVQGDRTVGIDEKPTPAFLD-------RLEQVFGFKAPR---HHGNDTVGSVMAM 454 Query: 401 EEGRIKAVWIMATNPMVSLPDADLVQRALQKCELVVSSDVITQTDTNALAH----VLLPA 456 EGR K + N ++ PD A++ C L V + T+ + + L H ++LP Sbjct: 455 LEGRTKVFIGLGGNFAMATPDTPRTFEAMRSCNLTVH--ITTKLNRSHLVHGKDALILPT 512 Query: 457 LAWGEKD 463 + E D Sbjct: 513 MGRTEID 519 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.321 0.136 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,072,482 Number of extensions: 137791 Number of successful extensions: 424 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 413 Number of HSP's successfully gapped: 5 Length of query: 922 Length of database: 1,619,870 Length adjustment: 94 Effective length of query: 828 Effective length of database: 1,174,780 Effective search space: 972717840 Effective search space used: 972717840 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 135 (56.6 bits)