BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0063.p
         (583 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300309425|ref|YP_003773517.1| lysophospholipase [Herbaspirill...  1178   0.0  
gi|300312528|ref|YP_003776620.1| lysophospholipase [Herbaspirill...    82   1e-16

>gi|300309425|ref|YP_003773517.1| lysophospholipase [Herbaspirillum
           seropedicae SmR1]
          Length = 583

 Score = 1178 bits (3047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/583 (99%), Positives = 581/583 (99%)

Query: 1   MNRPVQEHQFTTHDDQTLFYRRWPATATERRGAVVMFHRGHEHGGRMAHLVDELDLPDFD 60
           MNRPVQEHQFTTHDDQTLFYRRWPATATERRGAVVMFHRGHEHGGRMAHLVDELDLPDFD
Sbjct: 1   MNRPVQEHQFTTHDDQTLFYRRWPATATERRGAVVMFHRGHEHGGRMAHLVDELDLPDFD 60

Query: 61  FYAWDARGHGRSPGPRGYSPSFADSVRDVQTFIGHLRQQWQLAEEDLAVLAQSVGAVLVS 120
           FYAWDARGHGRSPGPRGYSPSFADSVRDVQTFIGHLRQQWQLAEEDLAVLAQSVGAVLVS
Sbjct: 61  FYAWDARGHGRSPGPRGYSPSFADSVRDVQTFIGHLRQQWQLAEEDLAVLAQSVGAVLVS 120

Query: 121 TWAHDYAPRVRCLVLASPAFKVKLYVPFARPGLALQQKLRGNFFVNSYVKAKYLTHDPAR 180
           TWAHDYAPRVRCLVLASPAFKVKLYVPFARPGLALQQKLRGNFFVNSYVKAKYLTHDPAR
Sbjct: 121 TWAHDYAPRVRCLVLASPAFKVKLYVPFARPGLALQQKLRGNFFVNSYVKAKYLTHDPAR 180

Query: 181 QASYDSDPLISRPISVNILLALYEAAERVVADAQAITIPTQLLISGADWVVHHGPQHDFF 240
           QASYDSDPLISRPISVNILLALYEAAERVVADAQAITIPTQLLISGADWVVHHGPQHDFF
Sbjct: 181 QASYDSDPLISRPISVNILLALYEAAERVVADAQAITIPTQLLISGADWVVHHGPQHDFF 240

Query: 241 DRLGTTAKEKHVLPGFYHDTFGEKDRQIATDLAREFILRQFAQPWSRPDLRQAHRHGPTF 300
           DRLGTT KEKHVLPGFYHDTFGEKDRQIATDLAREFILRQFAQPWSRPDLRQAHRHGPTF
Sbjct: 241 DRLGTTTKEKHVLPGFYHDTFGEKDRQIATDLAREFILRQFAQPWSRPDLRQAHRHGPTF 300

Query: 301 DEAQALAAPLQALSPKGLYWAGYRANLKLGGLLSAGVALGHRTGFDSGSTLDYVYRNRPE 360
           DEAQALAAPL ALSPKGLYWAGYRANLKLGGLLSAGVALGHRTGFDSGSTLDYVYRNRPE
Sbjct: 301 DEAQALAAPLPALSPKGLYWAGYRANLKLGGLLSAGVALGHRTGFDSGSTLDYVYRNRPE 360

Query: 361 GAGPLGRAIDRQYLDAIGWKGIRQRKLHIEQLLRLALARLQAEGQPLRVLDIAAGHGRYV 420
           GAGPLGRAIDRQYLDAIGWKGIRQRKLHIEQLLRLALARLQAEGQPLRVLDIAAGHGRYV
Sbjct: 361 GAGPLGRAIDRQYLDAIGWKGIRQRKLHIEQLLRLALARLQAEGQPLRVLDIAAGHGRYV 420

Query: 421 LEALESGPRPESILLRDYSELNVRQGSALIAEKGLGEIARFVQGDAFDRASLAAVTPRPT 480
           LEALESGPRPESILLRDYSELNVRQGSALIAEKGLGEIARFVQGDAFDRASLAAVTPRPT
Sbjct: 421 LEALESGPRPESILLRDYSELNVRQGSALIAEKGLGEIARFVQGDAFDRASLAAVTPRPT 480

Query: 481 VGIVSGLYELFPDNDAVATSLAGMADAIAPGGYLIYTGQPWHPQLEMIARALTSHRGGQA 540
           VGIVSGLYELFPDNDAVATSLAGMADAIAPGGYLIYTGQPWHPQLEMIARALTSHRGGQA
Sbjct: 481 VGIVSGLYELFPDNDAVATSLAGMADAIAPGGYLIYTGQPWHPQLEMIARALTSHRGGQA 540

Query: 541 WVMRRRTQAEMDQLVAEAGFEKIEQRIDQWGIFTVSLARRKVS 583
           WVMRRRTQAEMDQLVAEAGFEKIEQRIDQWGIFTVSLARRKVS
Sbjct: 541 WVMRRRTQAEMDQLVAEAGFEKIEQRIDQWGIFTVSLARRKVS 583


>gi|300312528|ref|YP_003776620.1| lysophospholipase [Herbaspirillum
           seropedicae SmR1]
          Length = 282

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 8/281 (2%)

Query: 6   QEHQFTTHDDQTLFYRRWPATATERRGAVVMFHRGHEHGGRMAHLVDELDLPDFDFYAWD 65
           QEH     D   LF R W         AV M H   EHGGR   L    +         D
Sbjct: 8   QEHWIDADDGTRLFCRDWLLPGAT--AAVQMVHGLGEHGGRYFSLARLFNEAGLSVRICD 65

Query: 66  ARGHGRSPGPRGYSPSFADSVRDVQTFIGHLRQQWQLAEEDLAVLAQSVGAVLVSTWAHD 125
            RGHG S G +G      D +RD++       ++ +       +   S+G ++ + +A  
Sbjct: 66  QRGHGNSGGVQGSLIRPDDLLRDLKLSFDDFSRRTECVP---VLFGHSMGGLVAARFATG 122

Query: 126 YAPRVRCLVLASPAFKVKLYVPFARPGLALQQKLRGNFFVNSYVKAKYLTHDPARQASYD 185
               VR L L+SPA  + +   + +  LA+   +     + + + A  ++HDP    +Y 
Sbjct: 123 GYSPVRALALSSPALALDMK-GWQKLLLAVSTAIAPGLALPTALPASRISHDPHEVRAYR 181

Query: 186 SDPLISRPISVNILLALYEAAERVVADAQAITIPTQLLISGADWVVHHGPQHDFFDRLGT 245
            DPL    I+  +L  + +A  +V  +A   T P  L ++G D  V       FFD L +
Sbjct: 182 KDPLNHGKIAPRMLHFMLDAMRQVEREAGQFTRPVLLQVAGDDAFVAPRGSRAFFDALPS 241

Query: 246 TAKEKHVLPGFYHDTFGEKD--RQIATDLAREFILRQFAQP 284
             K  H     YH+ F E+   R  A    R ++ +  AQP
Sbjct: 242 GRKTLHWYEHAYHEIFNEEASLRAQAMQDLRNWLAQLSAQP 282


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.137    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,921,121
Number of extensions: 83985
Number of successful extensions: 242
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 240
Number of HSP's successfully gapped: 2
Length of query: 583
Length of database: 1,619,870
Length adjustment: 90
Effective length of query: 493
Effective length of database: 1,193,720
Effective search space: 588503960
Effective search space used: 588503960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 133 (55.8 bits)