BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0331.p
         (164 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313596|ref|YP_003777688.1| 4-hydroxybenzoyl-CoA thioestera...   309   7e-86
gi|300311112|ref|YP_003775204.1| thioesterase [Herbaspirillum se...    67   5e-13

>gi|300313596|ref|YP_003777688.1| 4-hydroxybenzoyl-CoA thioesterase
           [Herbaspirillum seropedicae SmR1]
          Length = 150

 Score =  309 bits (792), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 15  MSEPRPQPGRRADFLHFHAIPTRWMDNDVYGHVNNVVYYSWFDTAVNHYLVQQGALDIEH 74
           MSEPRPQPGRRADFLHFHAIPTRWMDNDVYGHVNNVVYYSWFDTAVNHYLVQQGALDIEH
Sbjct: 1   MSEPRPQPGRRADFLHFHAIPTRWMDNDVYGHVNNVVYYSWFDTAVNHYLVQQGALDIEH 60

Query: 75  GEVIGLVIETQCNYFASVAFPDLIEVGVRVAHLGRSSVRYELGIFKAGEESAAARGHFVH 134
           GEVIGLVIETQCNYFASVAFPDLIEVGVRVAHLGRSSVRYELGIFKAGEESAAARGHFVH
Sbjct: 61  GEVIGLVIETQCNYFASVAFPDLIEVGVRVAHLGRSSVRYELGIFKAGEESAAARGHFVH 120

Query: 135 VYVDRASRRPVALPEALRAALMPLTLLMPG 164
           VYVDRASRRPVALPEALRAALMPLTLLMPG
Sbjct: 121 VYVDRASRRPVALPEALRAALMPLTLLMPG 150


>gi|300311112|ref|YP_003775204.1| thioesterase [Herbaspirillum
           seropedicae SmR1]
          Length = 141

 Score = 67.4 bits (163), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 20  PQPGRRADFLHFHAIPTRWMDNDVYGHVNNVVYYSWFDTAVNHYLVQQGALDIEHGEVIG 79
           PQ   +  +L    I  RW D D +GHVNN VY+ + +     +L +     I  GE   
Sbjct: 5   PQANSKQLYLSRQTI--RWGDMDAFGHVNNTVYFRFMEQCRIEWLEEVFGPTIA-GEEGP 61

Query: 80  LVIETQCNYFASVAFPDLIEVGVRVAHLGRSSVRYELGIFKAGEESAA-ARGHFVHVYVD 138
           +++   CN+   + +P  I V +   HLGR+SV     I  A +E    A G    V+VD
Sbjct: 62  VIVNAHCNFRRQMKYPARICVEMSAGHLGRTSVETTYIIRDAADEQIIYADGAAKIVWVD 121

Query: 139 RASRRPVALPEALRAALMPL 158
               +  ALPE LR  L  L
Sbjct: 122 FKKEKSTALPEQLRQLLTSL 141


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.140    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 565,891
Number of extensions: 23113
Number of successful extensions: 76
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 74
Number of HSP's successfully gapped: 2
Length of query: 164
Length of database: 1,619,870
Length adjustment: 78
Effective length of query: 86
Effective length of database: 1,250,540
Effective search space: 107546440
Effective search space used: 107546440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 127 (53.5 bits)