BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0310.p
         (291 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313577|ref|YP_003777669.1| lipid A biosynthesis lauroyl ac...   586   e-169
gi|300313576|ref|YP_003777668.1| lauroyl/myristoyl acyltransfera...    74   1e-14

>gi|300313577|ref|YP_003777669.1| lipid A biosynthesis lauroyl
           acyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 294

 Score =  586 bits (1511), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 290/291 (99%), Positives = 290/291 (99%)

Query: 1   LLAIMWLLHWLPLPILGRLGEGIGSLLYLYMRPRRHIALTNLRLCFPEKTEEERVSIARE 60
           LLAIMWLLHWLPLPILGRLGEGIGSLLYLYMRPRRHIALTNLRLCFPEKTEEERVSIARE
Sbjct: 4   LLAIMWLLHWLPLPILGRLGEGIGSLLYLYMRPRRHIALTNLRLCFPEKTEEERVSIARE 63

Query: 61  HFRLFARSALERGILWWAPISRLRRLIQVEPGMPLDTFAKGPTILLAPHFVCLEIPGATL 120
           HFRLFARSALERGILWWAPISRLRRLIQVEPGMPLDTFAKGPTILLAPHFVCLEIPGATL
Sbjct: 64  HFRLFARSALERGILWWAPISRLRRLIQVEPGMPLDTFAKGPTILLAPHFVCLEIPGATL 123

Query: 121 GVFSEYSACTIYTKQRNDVIDRALLKGRLRFRPATLLAREQGVKPIIRAMRKGLPFLMLP 180
           GVFSEYSACTIYTKQRNDVIDRALLKGRLRFRPATLLAREQGVKPIIRAMRKGLPFLMLP
Sbjct: 124 GVFSEYSACTIYTKQRNDVIDRALLKGRLRFRPATLLAREQGVKPIIRAMRKGLPFLMLP 183

Query: 181 DMDFGIRDAEFVPFFGVPAATLTATARIAAATGAAVVPVVCTFLPGYKGWKATYYPAWTD 240
           DMDFGIRDAEFVPFFGVPAATLTATARIAAATGAAVVPVVCTFLP YKGWKATYYPAWTD
Sbjct: 184 DMDFGIRDAEFVPFFGVPAATLTATARIAAATGAAVVPVVCTFLPDYKGWKATYYPAWTD 243

Query: 241 YPGEDIVAATRRMNAFIEDRVREHPAEYFWAHKRFKTRPPGEPDVYGRDDA 291
           YPGEDIVAATRRMNAFIEDRVREHPAEYFWAHKRFKTRPPGEPDVYGRDDA
Sbjct: 244 YPGEDIVAATRRMNAFIEDRVREHPAEYFWAHKRFKTRPPGEPDVYGRDDA 294


>gi|300313576|ref|YP_003777668.1| lauroyl/myristoyl acyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 282

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 126/289 (43%), Gaps = 25/289 (8%)

Query: 1   LLAIMWLLHWLPLPILGRLGEGIGSLLYLYMRPRRHIALTNLRLCFPEKTEEERVSIARE 60
           L+++  LL +LPLP L  +G  +G L++L     R    +N+ L     +    V  A  
Sbjct: 2   LVSLFRLLSFLPLPALHAIGVVVGWLVFLLSPSYRRRLRSNITLAGHGASLYRAVGEA-- 59

Query: 61  HFRLFARSALERGILWWAP---ISRLRRLIQVEPGMPLDTFA-KGPTILLAPHFVCLEIP 116
                 +   E   +W A    + R  R++  E  +     A K   I L PH  C EI 
Sbjct: 60  -----GKGMFELPFIWCASPRRVLRTARIVNWE--LVQQALATKSGVIFLTPHLGCFEI- 111

Query: 117 GATLGVFSEYSACTIYTKQRND----VIDRALLKGRLRFRPATLLAREQGVKPIIRAMRK 172
            A   V    S   +Y   R      +I+ A  +  L   PA L     GV+ +++A++ 
Sbjct: 112 -AAQVVARHTSLSVLYRPPRKAALKPLIEGARARANLHLAPANL----AGVRILLKALKT 166

Query: 173 GLPFLMLPDMDFGIRDAEFVPFFGVPAATLTATARIAAATGAAVVPVVCTFLPGYKGWKA 232
           G    +LPD      +  +  FFG PA T+T +A++   +GA ++      L   +G+  
Sbjct: 167 GQAIGLLPDQVPQNGEGVWAGFFGKPAYTMTLSAKLQQMSGAPLLLTYAQRLSWGRGYAI 226

Query: 233 TYYPAWTDYPGEDIVAATRRMNAFIEDRVREHPAEYFWAHKRFKTRPPG 281
            + P      G     A + +NA +E  +   PA+Y W++ R+KT PPG
Sbjct: 227 HFVPFEGALDGTPEQQA-QAINAAMEALIARCPAQYIWSYNRYKT-PPG 273


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.327    0.143    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 940,518
Number of extensions: 37001
Number of successful extensions: 124
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 2
Length of query: 291
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 207
Effective length of database: 1,222,130
Effective search space: 252980910
Effective search space used: 252980910
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 130 (54.7 bits)