BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0309.p
         (283 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313576|ref|YP_003777668.1| lauroyl/myristoyl acyltransfera...   549   e-158
gi|300313577|ref|YP_003777669.1| lipid A biosynthesis lauroyl ac...    62   4e-11

>gi|300313576|ref|YP_003777668.1| lauroyl/myristoyl acyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 282

 Score =  549 bits (1415), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 275/283 (97%), Positives = 276/283 (97%), Gaps = 1/283 (0%)

Query: 1   MLVSLFRLLSFLPLPALHAIGVVVGWLVFLLSPSYRRRLRSNITLAGHGASLYRAVGEAG 60
           MLVSLFRLLSFLPLPALHAIGVVVGWLVFLLSPSYRRRLRSNITLAGHGASLYRAVGEAG
Sbjct: 1   MLVSLFRLLSFLPLPALHAIGVVVGWLVFLLSPSYRRRLRSNITLAGHGASLYRAVGEAG 60

Query: 61  KGMFELPFIWCASPRRVLRTARVANWELVQQALAAKSGVILLTPHLGCFEIAAQVVARHT 120
           KGMFELPFIWCASPRRVLRTAR+ NWELVQQALA KSGVI LTPHLGCFEIAAQVVARHT
Sbjct: 61  KGMFELPFIWCASPRRVLRTARIVNWELVQQALATKSGVIFLTPHLGCFEIAAQVVARHT 120

Query: 121 SLSVLYRPPRKAALKPLIEGARARARYLHLAPANLAGVRILLKALKTGQAIGLLPDQVPQ 180
           SLSVLYRPPRKAALKPLIEGARARA  LHLAPANLAGVRILLKALKTGQAIGLLPDQVPQ
Sbjct: 121 SLSVLYRPPRKAALKPLIEGARARAN-LHLAPANLAGVRILLKALKTGQAIGLLPDQVPQ 179

Query: 181 NGEGVWAGFFGKPAYTMTLSAKLQQMSGAPLLLTYAQRLSWGRGYAIHFVPFEGTLDGTP 240
           NGEGVWAGFFGKPAYTMTLSAKLQQMSGAPLLLTYAQRLSWGRGYAIHFVPFEG LDGTP
Sbjct: 180 NGEGVWAGFFGKPAYTMTLSAKLQQMSGAPLLLTYAQRLSWGRGYAIHFVPFEGALDGTP 239

Query: 241 EQQAQAINAAMETLIARCPAQYIWSYNRYKTPPGVSRPGEAAA 283
           EQQAQAINAAME LIARCPAQYIWSYNRYKTPPGVSRPGEAAA
Sbjct: 240 EQQAQAINAAMEALIARCPAQYIWSYNRYKTPPGVSRPGEAAA 282


>gi|300313577|ref|YP_003777669.1| lipid A biosynthesis lauroyl
           acyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 294

 Score = 62.4 bits (150), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 125/285 (43%), Gaps = 14/285 (4%)

Query: 1   MLVSLFRLLSFLPLPALHAIGVVVGWLVFLLSPSYRRRLRSNITLAGHGASLYRAVGEA- 59
           +L+++  LL +LPLP L  +G  +G L++L     R    +N+ L     +    V  A 
Sbjct: 3   LLLAIMWLLHWLPLPILGRLGEGIGSLLYLYMRPRRHIALTNLRLCFPEKTEEERVSIAR 62

Query: 60  ------GKGMFELPFIWCASPRRVLRTARVANWELVQQALAAKSGVILLTPHLGCFEI-- 111
                  +   E   +W A   R+ R  +V     +     AK   ILL PH  C EI  
Sbjct: 63  EHFRLFARSALERGILWWAPISRLRRLIQVEPGMPLDTF--AKGPTILLAPHFVCLEIPG 120

Query: 112 AAQVVARHTSLSVLYRPPRKAALKPLIEGARARARYLHLAPANLAGVRILLKALKTGQAI 171
           A   V    S   +Y   R   +   +   R R R   L  A   GV+ +++A++ G   
Sbjct: 121 ATLGVFSEYSACTIYTKQRNDVIDRALLKGRLRFRPATLL-AREQGVKPIIRAMRKGLPF 179

Query: 172 GLLPDQVPQNGEGVWAGFFGKPAYTMTLSAKLQQMSGAPLLLTYAQRLSWGRGYAIHFVP 231
            +LPD      +  +  FFG PA T+T +A++   +GA ++      L   +G+   + P
Sbjct: 180 LMLPDMDFGIRDAEFVPFFGVPAATLTATARIAAATGAAVVPVVCTFLPDYKGWKATYYP 239

Query: 232 FEGTLDGTPEQQA-QAINAAMETLIARCPAQYIWSYNRYKT-PPG 274
                 G     A + +NA +E  +   PA+Y W++ R+KT PPG
Sbjct: 240 AWTDYPGEDIVAATRRMNAFIEDRVREHPAEYFWAHKRFKTRPPG 284


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 905,231
Number of extensions: 38798
Number of successful extensions: 163
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 159
Number of HSP's successfully gapped: 2
Length of query: 283
Length of database: 1,619,870
Length adjustment: 84
Effective length of query: 199
Effective length of database: 1,222,130
Effective search space: 243203870
Effective search space used: 243203870
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 130 (54.7 bits)