BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0132.p
         (387 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311783|ref|YP_003775875.1| dienelactone hydrolase [Herbasp...   793   0.0  
gi|300310280|ref|YP_003774372.1| dienelactone hydrolase [Herbasp...   104   1e-23

>gi|300311783|ref|YP_003775875.1| dienelactone hydrolase
           [Herbaspirillum seropedicae SmR1]
          Length = 403

 Score =  793 bits (2048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/387 (99%), Positives = 385/387 (99%)

Query: 1   MKIKIAAVLLLGCLLQHPSWAAEPPLNKALREEVIMIPSGTGIFSVKLETTLFRPPGEGP 60
           MKIKI AVLLLGCLLQHPSWAAEPPLNKALREEVIMIPSGTGIFSVKLETTLFRPPGEGP
Sbjct: 17  MKIKIVAVLLLGCLLQHPSWAAEPPLNKALREEVIMIPSGTGIFSVKLETTLFRPPGEGP 76

Query: 61  FPLLIINHGKSPGNPAFQPRGRSVVMATEFVRRGYAVLLPMRKGFSRSGGMYVDGGCNIR 120
           FPLLIINHGKSPGNPAFQPRGRSVVMATEFVRRGYAVLLPMRKGFSRSGGMYVDGGCNIR
Sbjct: 77  FPLLIINHGKSPGNPAFQPRGRSVVMATEFVRRGYAVLLPMRKGFSRSGGMYVDGGCNIR 136

Query: 121 GNGEAQADDLQAALDYARQQAWVDKDRVIIMGQSHGGLTTMAFGERNPPGVRALLNFAGG 180
           GNGEAQADDLQAALDYARQQAWVDKDRVIIMGQSHGGLTTMAFGERNPPGVRALLNFAGG
Sbjct: 137 GNGEAQADDLQAALDYARQQAWVDKDRVIIMGQSHGGLTTMAFGERNPPGVRALLNFAGG 196

Query: 181 LRYDATGCIWKSALVDAFGVFGSRTRIPSLWFYGENDSYFNPELAARMYEAYTKAGGPAT 240
           LRYDATGCIWKSALVDAFGVFGSRTRIPSLWFYGENDSYFNPELAARMYEAYTKAGGPAT
Sbjct: 197 LRYDATGCIWKSALVDAFGVFGSRTRIPSLWFYGENDSYFNPELAARMYEAYTKAGGPAT 256

Query: 241 LVAFGPFKSDAHGMSGSRDGIPIWWPPTEALLKQVGMPTEKTVRLTGELPSSGYANLEDS 300
           LVAFGPFKSDAHGMSGSRDGIPIWWPPTEALLKQVGMPTEKTVRLTGELP SGYANLEDS
Sbjct: 257 LVAFGPFKSDAHGMSGSRDGIPIWWPPTEALLKQVGMPTEKTVRLTGELPGSGYANLEDS 316

Query: 301 AAVPYLNEKTRALYEKFLAMHAPRAFAISSSNHVGWAVNGENPSERALQNCQKNSPEPCA 360
           AAVPYLNEKTRALYEKFLAMHAPRAFAISSSNHVGWAVNGENPSERALQNCQKNSPEPCA
Sbjct: 317 AAVPYLNEKTRALYEKFLAMHAPRAFAISSSNHVGWAVNGENPSERALQNCQKNSPEPCA 376

Query: 361 LYVINDDVVWVKPAEGASPVAASEKLP 387
           LYVINDDVVWVKPAEGASPVAASEKLP
Sbjct: 377 LYVINDDVVWVKPAEGASPVAASEKLP 403


>gi|300310280|ref|YP_003774372.1| dienelactone hydrolase
           [Herbaspirillum seropedicae SmR1]
          Length = 306

 Score =  104 bits (259), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 115/248 (46%), Gaps = 16/248 (6%)

Query: 47  KLETTLFRPPGE-GPFPLLIINHGKSPGNPAFQPRGRS--VVMATEFVRRGYAVLLPMRK 103
           K+  T++R      P P+L++NHG++         GR+   V +  FVR G+ V +P R 
Sbjct: 62  KMRVTIWRDDANPAPAPILVLNHGRAAEAAGRANLGRARFTVASRFFVRYGFVVAVPTRV 121

Query: 104 GFSRSGGMYVD--GGCNIRGNG---EAQADDLQAALDYARQQAWVDKDRVIIMGQSHGGL 158
           G+  +GG  ++  GGCN R      EA A    A ++  +     D  RV+++GQS GG 
Sbjct: 122 GYGVTGGDDLEDAGGCNSRFYPPVYEAAAQQTIATINAVKALPGTDGARVVVVGQSFGGT 181

Query: 159 TTMAFGERNPPGVRALLNFAGG----LRYDATGCIWKSALVDAFGVFGSRTRIPSLWFYG 214
           T +       PG++A +NFAGG     +           L   FG +G  +++P+LW Y 
Sbjct: 182 TAITVASHQVPGLKAAINFAGGGGGNPKTHPQQPCGPQKLEQMFGDYGKSSQVPTLWIYT 241

Query: 215 ENDSYFNPELAARMYEAYTKAGGPATLVAFGPFKSDAHGMSGSRDGIPIWWPPTEA-LLK 273
           END +  P    + + A+  AGG    V F P   D H +       P  W P  A  L+
Sbjct: 242 ENDQWMGPTYPRQWFNAFQAAGGKGEFVLFPPHGEDGHLLFAR---FPQSWQPRVAEFLE 298

Query: 274 QVGMPTEK 281
           Q G    +
Sbjct: 299 QQGFTAHR 306


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.136    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,332,918
Number of extensions: 58415
Number of successful extensions: 147
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 144
Number of HSP's successfully gapped: 2
Length of query: 387
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 300
Effective length of database: 1,207,925
Effective search space: 362377500
Effective search space used: 362377500
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)