BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0123.p
         (775 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311791|ref|YP_003775883.1| phosphatidylserine/phosphatidyl...  1548   0.0  

>gi|300311791|ref|YP_003775883.1|
           phosphatidylserine/phosphatidylglycerophosphate/
           cardiolipin synthase [Herbaspirillum seropedicae SmR1]
          Length = 775

 Score = 1548 bits (4008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 765/775 (98%), Positives = 769/775 (99%)

Query: 1   MDSAGSMSSTPAPPDAPATGLLQPGRNCWRLAHADRFRLLIDAADYFSALRQALVKARRS 60
           MDSAGSMSSTPAPPDAPATGLLQPGRNCWRLAHADRFRLLIDAADYFSALRQALVKARRS
Sbjct: 1   MDSAGSMSSTPAPPDAPATGLLQPGRNCWRLAHADRFRLLIDAADYFSALRQALVKARRS 60

Query: 61  VYILGWDIDSRTVLTPQGSDDGLPAQLGDLLHALVERQPDLHIRVLNWDYAMLYALEREW 120
           VYILGWDIDSRTVLTPQGSDDGLPAQLGDLLHALVERQPDLHIRVLNWDYAMLYALEREW
Sbjct: 61  VYILGWDIDSRTVLTPQGSDDGLPAQLGDLLHALVERQPDLHIRVLNWDYAMLYALEREW 120

Query: 121 MMARKPGRPRNKRLHFRTDARHPVGASHHQKIVVIDDQLAFVGGLDLTRCRWDNQEHLPD 180
           MM RKPGRPRNKRLHFRTDARHPVGASHHQKIVVIDDQLAFVGGLDLTRCRWDNQEHLPD
Sbjct: 121 MMVRKPGRPRNKRLHFRTDARHPVGASHHQKIVVIDDQLAFVGGLDLTRCRWDNQEHLPD 180

Query: 181 HPLRRDPDDRPYAPFHDVQAMADGEVARAMGVLARRRWALAGYAEKGAEKHTDTIDARAT 240
           HPLRRDPDDRPYAPFHDVQAMADGEVARAMGVLARRRWALAGYAEK  EKHTDT +ARAT
Sbjct: 181 HPLRRDPDDRPYAPFHDVQAMADGEVARAMGVLARRRWALAGYAEKSTEKHTDTTEARAT 240

Query: 241 AAESTLAASDPWPPAFVPDLQDVMIGISRTEPAYEDRPGVYEVRELYLDAIAEARQHLFF 300
           AAESTLAASDPWPPAFVPDLQDVMIGISRTEPAYEDRPGVYEVRELYLDAIAEARQHLFF
Sbjct: 241 AAESTLAASDPWPPAFVPDLQDVMIGISRTEPAYEDRPGVYEVRELYLDAIAEARQHLFF 300

Query: 301 ENQYFTSNVLAEALGARLREPDGPEVAVISPRTQSGWLEQATMGALRARIHHRLKAALAD 360
           ENQYFTSNVLAEALGARLREPDGPEVAVISPRTQSGWLEQATMGALRARIHHRLKAALAD
Sbjct: 301 ENQYFTSNVLAEALGARLREPDGPEVAVISPRTQSGWLEQATMGALRARIHHRLKAALAD 360

Query: 361 QGEGAERRYQMYCPHLPGLEDDCCLNVHSKVFAMDDRLFSVGSANMSNRSMGFDTECNLS 420
           QGEGAERRYQMYCPHLPGLEDDCCLNVHSKVFAMDDRLFSVGSANMSNRSMGFDTECNLS
Sbjct: 361 QGEGAERRYQMYCPHLPGLEDDCCLNVHSKVFAMDDRLFSVGSANMSNRSMGFDTECNLS 420

Query: 421 IEVQGDATQQAQVRQVIATLRNRLLGEHLGVPAQAVQQAMEDSGRLHAAIDALTQPEARS 480
           IEVQGDA +QAQVRQVIATLRNRLLGEHLGVPAQAVQQAMEDSG LHAAIDALTQPEARS
Sbjct: 421 IEVQGDAAKQAQVRQVIATLRNRLLGEHLGVPAQAVQQAMEDSGGLHAAIDALTQPEARS 480

Query: 481 LRPLDPRLIPELDALTQDNAVFDPERPISPDEIVDAYVPRSARKPVPRRMIGLGVLAVLL 540
           L+PLDPRLIPELDA+TQDNAVFDPERPISPDEIVDAYVPRSARKPVPRRMIGLGVLAVLL
Sbjct: 481 LQPLDPRLIPELDAVTQDNAVFDPERPISPDEIVDAYVPRSARKPVPRRMIGLGVLAVLL 540

Query: 541 VAFALAWRFTPLREWINLNSLIALARSVDKLPFSPLIVMTTFVVAGMLMVPITVLIAVAG 600
           VAFALAWRFTPLREWINLNSLIALARSVDKLPFSPLIVMTTFVVAGMLMVPITVLIAVAG
Sbjct: 541 VAFALAWRFTPLREWINLNSLIALARSVDKLPFSPLIVMTTFVVAGMLMVPITVLIAVAG 600

Query: 601 VVFGPLNGGLYAAVGVGLSALLGFGVGHWLGHDALRDLLGPRINNLSRRFAQRGIAAMAV 660
           VVFGPLNGGLYAAVGVGLSALLGFGVGHWLGHDALRDLLGPRINNLSRRFAQRGIAAMAV
Sbjct: 601 VVFGPLNGGLYAAVGVGLSALLGFGVGHWLGHDALRDLLGPRINNLSRRFAQRGIAAMAV 660

Query: 661 VRLLPIAPFTIVNVVAGASHLRLRDYLLGTLLGMSPGIVLTVVFSHNLAEAIRHPSLETV 720
           VRLLPIAPFTIVNVVAGASHLRLRDYLLGTLLGMSPGIVLTVVFSHNLAEAIRHPSLETV
Sbjct: 661 VRLLPIAPFTIVNVVAGASHLRLRDYLLGTLLGMSPGIVLTVVFSHNLAEAIRHPSLETV 720

Query: 721 LVLVAVTVALMLVAFGLQKLFRPRGQERGRASSQRKGKGAAGPRQGEAAVKVRQA 775
           LVLVAVTVALMLVAFGLQKLFRPRGQERGRASSQRKGKGAAGPRQGEAAVKVRQA
Sbjct: 721 LVLVAVTVALMLVAFGLQKLFRPRGQERGRASSQRKGKGAAGPRQGEAAVKVRQA 775


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,307,852
Number of extensions: 96337
Number of successful extensions: 363
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 361
Number of HSP's successfully gapped: 1
Length of query: 775
Length of database: 1,619,870
Length adjustment: 93
Effective length of query: 682
Effective length of database: 1,179,515
Effective search space: 804429230
Effective search space used: 804429230
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 134 (56.2 bits)