BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0096.p
         (993 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311814|ref|YP_003775906.1| malto-oligosyl trehalose syntha...  1930   0.0  

>gi|300311814|ref|YP_003775906.1| malto-oligosyl trehalose synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 987

 Score = 1930 bits (4999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 982/993 (98%), Positives = 984/993 (99%), Gaps = 6/993 (0%)

Query: 1   MPHQPDSELAAPPVSHAAPLIRATARLQLHRDFNFAQAAEVVDYYQRLGVSHLYVSPILT 60
           MPHQPDSELAAPPVSHAAPLIRATARLQLHRDFNFAQAAEVVDYYQRLGVSHLYVSPILT
Sbjct: 1   MPHQPDSELAAPPVSHAAPLIRATARLQLHRDFNFAQAAEVVDYYQRLGVSHLYVSPILT 60

Query: 61  ARPGSTHGYDVADASRINPELGGESGLRQLVQRLRAAGMGLLVDIVPNHMAVGRHNPWWQ 120
           ARPGSTHGYDVADASRINPELGGESGLRQLVQRLRAAGMGLLVDIVPNHMAVGRHNPWWQ
Sbjct: 61  ARPGSTHGYDVADASRINPELGGESGLRQLVQRLRAAGMGLLVDIVPNHMAVGRHNPWWQ 120

Query: 121 DVLRWGRESPHALWFDIDWDSADPALKGKVLLPFLGQPYAEALEAGELVLCLDAESGELY 180
           DVLRWGRESPHALWFDIDWDSADPALKGKVLLPFLGQPYAEALEAGELVLCLDAESGELY
Sbjct: 121 DVLRWGRESPHALWFDIDWDSADPALKGKVLLPFLGQPYAEALEAGELVLCLDAESGELY 180

Query: 181 VEHYEHRFPLAAPDHALVLETAGSQRLAEVIAAFRKAMPQTCSAAYGLLRDLARDPEALA 240
           VEHYEHRFPLAAPDHALVLETAGSQRLAEVIAAFRKAMPQTCSAAYGLLRDLARDPEALA
Sbjct: 181 VEHYEHRFPLAAPDHALVLETAGSQRLAEVIAAFRKAMPQTCSAAYGLLRDLARDPEALA 240

Query: 241 DIDAALAGFSAAQPHGRSALHQLLERQHYRLACWRNAADEINWRRFFEVSELVGMRVERE 300
           DIDAALAGFSAAQPHGRSALHQLLERQHYRLACWRNAADEINWRRFFEVSELVGMRVERE
Sbjct: 241 DIDAALAGFSAAQPHGRSALHQLLERQHYRLACWRNAADEINWRRFFEVSELVGMRVERE 300

Query: 301 DVFEAMHAELFRLYAEGLIDGLRLDHIDGLTDPAAYCLRLRQRLRSLRPGHEPYIVAEKI 360
           DVFEAMHAELFRLYAEGLIDGLRLDHIDGLTDPAAYCLRLRQRLRSLRPGHEPYIVAEKI
Sbjct: 301 DVFEAMHAELFRLYAEGLIDGLRLDHIDGLTDPAAYCLRLRQRLRSLRPGHEPYIVAEKI 360

Query: 361 LAGDEALPAAWQLDGSTGYDFMEQCAAVLHDGDGEPVLDDLWRDIVAELGSGPGSGSGSS 420
           LAGDEALPAAWQLDGSTGYDFMEQCAAVLHDGDGEPVLDDLWRDIVAELGS       SS
Sbjct: 361 LAGDEALPAAWQLDGSTGYDFMEQCAAVLHDGDGEPVLDDLWRDIVAELGSS------SS 414

Query: 421 QDCMQVHGPAELCHFPAMVQQARRSFLTRNFAAEFNALTHCLHQLARSAVTTRDLSLMSV 480
           QDCMQVHGPAELCHFP+MVQQARRSFLTRNFAAEFN LTHCLHQLARSAVTTRDLSLMSV
Sbjct: 415 QDCMQVHGPAELCHFPSMVQQARRSFLTRNFAAEFNVLTHCLHQLARSAVTTRDLSLMSV 474

Query: 481 RRCVAELLVHFPVYRTYATEEGMPALERELLARTAQLAAARLHPSDHPTLHVVEGWLGGD 540
           RRCVAELLVHFPVYRTYATEEGMPALERELLARTAQLAAARLHPSDHPTLHVVEGWLGGD
Sbjct: 475 RRCVAELLVHFPVYRTYATEEGMPALERELLARTAQLAAARLHPSDHPTLHVVEGWLGGD 534

Query: 541 LMLPVGQEPRRALQLRAIARFQQLTPPLTAKSMEDTAFYRYGRLLSRNEVGAEPAQLALS 600
           LMLPVGQEPRRALQLRAIARFQQLTPPLTAKSMEDTAFYRYGRLLSRNEVGAEPAQLALS
Sbjct: 535 LMLPVGQEPRRALQLRAIARFQQLTPPLTAKSMEDTAFYRYGRLLSRNEVGAEPAQLALS 594

Query: 601 IAHFHQLAARRAAQTPASLLATGTHDHKRGEDARMRLAALSEIPEEWATVVRHWRTLNAP 660
           IAHFHQLAARRAAQTPASLLATGTHDHKRGEDARMRLAALSEIPEEWATVVRHWRTLNAP
Sbjct: 595 IAHFHQLAARRAAQTPASLLATGTHDHKRGEDARMRLAALSEIPEEWATVVRHWRTLNAP 654

Query: 661 IVAATAGAEGGIDAADEYMLYQSLVGVWPDGMRAGDDDLSALEELAARVIAWQRKALREA 720
           IVAATAGAEGGIDAADEYMLYQSLVGVWPDGMRAGDDDLSALEELAARVIAWQRKALREA
Sbjct: 655 IVAATAGAEGGIDAADEYMLYQSLVGVWPDGMRAGDDDLSALEELAARVIAWQRKALREA 714

Query: 721 KRRSDWIAPQASYEAACERFTRALLCDPGLDARHHPFLTGLEEFVRRLAPLGAINSLSQT 780
           KRRSDWIAPQASYEAACERFTRALLCDPGLDARHHPFLTGLEEFVRRLAPLGAINSLSQT
Sbjct: 715 KRRSDWIAPQASYEAACERFTRALLCDPGLDARHHPFLTGLEEFVRRLAPLGAINSLSQT 774

Query: 781 MLKLTMPGVPDFYQGSELWDLSMVDPDNRRPVDFDMRQRRLADAMSRPVSLRQWQSGGAK 840
           MLKLT+PGVPDFYQGSELWDLSMVDPDNRRPVDFDMRQRRLADAMSRPVSLRQWQSGGAK
Sbjct: 775 MLKLTVPGVPDFYQGSELWDLSMVDPDNRRPVDFDMRQRRLADAMSRPVSLRQWQSGGAK 834

Query: 841 QQLIHAVLQHRRAHAQLYAQGQYLPLSTHGKLARHVIAFARLLPAPDGAQGQGWQATVVV 900
           QQLIHAVLQHRRAHAQLYAQGQYLPLSTHGKLARHVIAFARLLPAPDGAQGQGWQATVVV
Sbjct: 835 QQLIHAVLQHRRAHAQLYAQGQYLPLSTHGKLARHVIAFARLLPAPDGAQGQGWQATVVV 894

Query: 901 CTRLAAHLLAFDGARDEALPLVSAEVWGDTRIVLPAQLSHAQGERLRQWRSVLTSGAGPL 960
           CTRLAAHLLAFDGARDEALPLVSAEVWGDTRIVLPAQLSHAQGE LRQWRSVLTSGAGPL
Sbjct: 895 CTRLAAHLLAFDGARDEALPLVSAEVWGDTRIVLPAQLSHAQGEGLRQWRSVLTSGAGPL 954

Query: 961 EECAMPDGERGGSMTVSEILGSLPVELLELRLS 993
           EECAMPDGERGGSMTVSEILGSLPVELLELRLS
Sbjct: 955 EECAMPDGERGGSMTVSEILGSLPVELLELRLS 987


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.321    0.135    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 3,299,435
Number of extensions: 145144
Number of successful extensions: 522
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 522
Number of HSP's successfully gapped: 1
Length of query: 993
Length of database: 1,619,870
Length adjustment: 95
Effective length of query: 898
Effective length of database: 1,170,045
Effective search space: 1050700410
Effective search space used: 1050700410
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 135 (56.6 bits)