BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0095.p
         (751 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311815|ref|YP_003775907.1| 4-alpha-glucanotransferase [Her...  1478   0.0  

>gi|300311815|ref|YP_003775907.1| 4-alpha-glucanotransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 751

 Score = 1478 bits (3827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 744/751 (99%), Positives = 747/751 (99%)

Query: 1   MSSATLQVKPVTAPRAARLAADEDDLARLARRAGIATHWTDAYDQPQVVDNDALRAILEA 60
           MSSATLQVKPV AP+AARLAADEDDLARLARRAGIATHWTDAYDQPQVVDNDALRAILEA
Sbjct: 1   MSSATLQVKPVPAPKAARLAADEDDLARLARRAGIATHWTDAYDQPQVVDNDALRAILEA 60

Query: 61  LGLPCATPGDCRDSLAQLDQEQAVGYLPPLLTGVQHQPVCLPAHSHLHGQSCRLELENGA 120
           LGLPCATPGDCRDSLAQLDQEQAVGYLPPLLTGVQHQPVCLPAHSHLHGQSCRLELENGA
Sbjct: 61  LGLPCATPGDCRDSLAQLDQEQAVGYLPPLLTGVQHQPVCLPAHSHLHGQSCRLELENGA 120

Query: 121 RLMLLISSDLNAPPTLPPIAVPGYHRLLVAGHILTLAIAPARCYTIADALGEQADARGWA 180
           RLMLLISSDLNAPPTLPPIAVPGYHRLLVAGHILTLAIAPARCYTIADALGEQADARGWA
Sbjct: 121 RLMLLISSDLNAPPTLPPIAVPGYHRLLVAGHILTLAIAPARCYTIADALGEQADARGWA 180

Query: 181 LAAQVYGLRSDSLKPARKVYGDGGIGHFGALAALAPLASEYGAAALAMSPVHAMFTADPG 240
           LAAQVYGLRSDSLKPARKVYGDGGIGHFGALAALAPLASEYGAAALAMSPVHAMFTADPG
Sbjct: 181 LAAQVYGLRSDSLKPARKVYGDGGIGHFGALAALAPLASEYGAAALAMSPVHAMFTADPG 240

Query: 241 RSSPYSPSSRLFLNPLLIDPAAILGEAAQAQVLAEGGSEMIAAHERLQGAPLVDWARPGA 300
           RSSPYSPSSRLFLNPLLIDPAAILGEAAQAQVLAEGGSEMIAAHERLQGAPLVDWAR GA
Sbjct: 241 RSSPYSPSSRLFLNPLLIDPAAILGEAAQAQVLAEGGSEMIAAHERLQGAPLVDWARAGA 300

Query: 301 HRLTLLRRLHALFRTEHGADPAQSAAFAAFQSQGGPALRAHVLYEAYSNWLCQQGAPGYC 360
           HRLTLLRRL+ALFRTEHGADPAQSAAFAAFQSQGGPALRAH LYEAYSNWLCQQGAPGYC
Sbjct: 301 HRLTLLRRLYALFRTEHGADPAQSAAFAAFQSQGGPALRAHALYEAYSNWLCQQGAPGYC 360

Query: 361 DWRQWGAAAQHPDTPAMSNFAADHAGEIEFHLFLQWQATRQLAHAQQCARASGMPIGLIA 420
           DWRQWGAAAQHPDTPAMSNFAADHAGEIEFHLFLQWQATRQLAHAQQCARASGMPIGLIA
Sbjct: 361 DWRQWGAAAQHPDTPAMSNFAADHAGEIEFHLFLQWQATRQLAHAQQCARASGMPIGLIA 420

Query: 421 DLAVGADNGGSQAWSHQGEIAAGLTVGAPPDRLAPLGQNWGLGAFSPLALRRTGYQAYLA 480
           DLAVGADNGGSQAWSHQGEIAAGLTVGAPPDRLAPLGQNWGLGAFSPLALRRTGYQAYLA
Sbjct: 421 DLAVGADNGGSQAWSHQGEIAAGLTVGAPPDRLAPLGQNWGLGAFSPLALRRTGYQAYLA 480

Query: 481 MLRACMAQGGGVRIDHVLGLNRLWLVPQGLGAQAGAYVAYPQQDMLRLIALESWRHRAVV 540
           MLRACMAQGGGVRIDHVLGLNRLWLVPQGLGAQAGAYVAYPQQDMLRLIALESWRHRAVV
Sbjct: 481 MLRACMAQGGGVRIDHVLGLNRLWLVPQGLGAQAGAYVAYPQQDMLRLIALESWRHRAVV 540

Query: 541 IGEDLGTVPPGFDRDLAESGVAGIRVLWFQRDKEGFLPPADWSAQAIGVTTTHDLPTVAG 600
           IGEDLGTVPPGFDRDLAESGVAGIRVLWFQRDKEGFLPPA+WSAQAIGVTTTHDLPTVAG
Sbjct: 541 IGEDLGTVPPGFDRDLAESGVAGIRVLWFQRDKEGFLPPAEWSAQAIGVTTTHDLPTVAG 600

Query: 601 WWTGADIAWRHRLGQLEEGRAAAEDQRAKERDQLWQALVEQGWASGPVPQISAAEAEDLA 660
           WWTGADIAWRHRLGQLEEGRAAAE QRAKERDQLWQALVEQGWASGPVPQISAAEAEDLA
Sbjct: 601 WWTGADIAWRHRLGQLEEGRAAAEAQRAKERDQLWQALVEQGWASGPVPQISAAEAEDLA 660

Query: 661 QQALPPVPEECAIAVDAALEFVAATPAPLAVVPVEDILGLVQQPNLPGLTDPHPNWRRRL 720
           QQALPPVPEECAIAVDAALEFVAATPAPLAVVPVEDILGLVQQPNLPGLTDPHPNWRRRL
Sbjct: 661 QQALPPVPEECAIAVDAALEFVAATPAPLAVVPVEDILGLVQQPNLPGLTDPHPNWRRRL 720

Query: 721 PDDTPQLFASYAARARLERLRRVRGYTPKET 751
           PDDTPQLFASYAARARLERLRRVRGYTPKET
Sbjct: 721 PDDTPQLFASYAARARLERLRRVRGYTPKET 751


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.135    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,466,842
Number of extensions: 112371
Number of successful extensions: 381
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 381
Number of HSP's successfully gapped: 1
Length of query: 751
Length of database: 1,619,870
Length adjustment: 92
Effective length of query: 659
Effective length of database: 1,184,250
Effective search space: 780420750
Effective search space used: 780420750
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 134 (56.2 bits)