BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0029.p (1036 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311871|ref|YP_003775963.1| EAL domain-containing protein [... 2132 0.0 gi|300312904|ref|YP_003776996.1| diguanylate cyclase/phosphodies... 458 e-130 gi|300314042|ref|YP_003778134.1| signal transduction protein con... 444 e-125 gi|300311453|ref|YP_003775545.1| signal transduction containing ... 367 e-102 gi|300312606|ref|YP_003776698.1| EAL domain transmembrane protei... 365 e-101 >gi|300311871|ref|YP_003775963.1| EAL domain-containing protein [Herbaspirillum seropedicae SmR1] Length = 1036 Score = 2132 bits (5523), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1034/1036 (99%), Positives = 1035/1036 (99%) Query: 1 VNWIRLILLPLVILVTGLGVTWTAWNHEREAANKELHTQFASVLRETVSRIEQRMASYEQ 60 +NWIRLILLPLVILVTGLGVTWTAWNHEREAANKELHTQFASVLRETVSRIEQRMASYEQ Sbjct: 1 MNWIRLILLPLVILVTGLGVTWTAWNHEREAANKELHTQFASVLRETVSRIEQRMASYEQ 60 Query: 61 MLHGVQGLVAATGAIDRSQFRDYVQALNLDANFSGIQAIAVEEWVPAAALPAHLARMERQ 120 MLHGVQGLVAATGAIDRSQFRDYVQALNLDANFSGIQAIAVEEWVPAAALPAHLARMERQ Sbjct: 61 MLHGVQGLVAATGAIDRSQFRDYVQALNLDANFSGIQAIAVEEWVPAAALPAHLARMERQ 120 Query: 121 GLEGGYQIRPAGERSAYAPTVLREPYVGRNRTPFGFDQWSDPVRRSAMEKARDSGMATIS 180 GLEGGYQIRPAGERSAYAPTVLREPYVGRNRTPFGFDQWSDPVRRSAMEKARDSGMATIS Sbjct: 121 GLEGGYQIRPAGERSAYAPTVLREPYVGRNRTPFGFDQWSDPVRRSAMEKARDSGMATIS 180 Query: 181 GKVEVLAADGQRYPTFMMYLPLYERGKPPTTIAQRRASLVGWVHATFRMSDVIASLYGEN 240 GKVEVLAADGQRYPTFMMYLPLYERGKPPTTIAQRRASLVGWVHATFRMSDVIASLYGEN Sbjct: 181 GKVEVLAADGQRYPTFMMYLPLYERGKPPTTIAQRRASLVGWVHATFRMSDVIASLYGEN 240 Query: 241 SHTIVFSLYDGVQATPQALLYQSRQHEEAPQATRLSADEYVVVGNHNWTLTLRTNAAFHA 300 SHTIVFSLYDGVQATPQALLYQSRQHEEAPQATRLSADEYVVVGNHNWTLTLRTNAAFHA Sbjct: 241 SHTIVFSLYDGVQATPQALLYQSRQHEEAPQATRLSADEYVVVGNHNWTLTLRTNAAFHA 300 Query: 301 QFGRNAEPLIATTGIAMSLSLALLAWLMVSSRVRAVRLAQKMTAELRASEEQFRAIADCT 360 QFGRNAEPLIATTGIAMSLSLALLAWLMVSSRVRAVRLAQKMTAELRASEEQFRAIADCT Sbjct: 301 QFGRNAEPLIATTGIAMSLSLALLAWLMVSSRVRAVRLAQKMTAELRASEEQFRAIADCT 360 Query: 361 VNWEVWWGLDGRPRWINHAVLDYTGYTVEECLAMDDFIGTIAHPEDEPRIRAELARCMDG 420 VNWEVWWGLDGRPRWINHAVLDYTGYTVEECLAMDDFIGTIAHPEDEPRIRAELARCMDG Sbjct: 361 VNWEVWWGLDGRPRWINHAVLDYTGYTVEECLAMDDFIGTIAHPEDEPRIRAELARCMDG 420 Query: 421 QKREDVELRCVRKDGSVFWLALSCAPIHDAQGRFTGFRTSSRDITDRKQIEAELRISAVA 480 QKREDVELRCVRKDGSVFWLALSCAPIHDAQGRFTGFRTSSRDITDRKQIEAELRISAVA Sbjct: 421 QKREDVELRCVRKDGSVFWLALSCAPIHDAQGRFTGFRTSSRDITDRKQIEAELRISAVA 480 Query: 481 FDSREGMLITDANSKILRVNKAFTEITGYSAEEIVGKHPNLLRSDRHGPAFFQEMRESIR 540 FDSREGMLITDANSKILRVNKAFTEITGYSAEEIVGKHPNLLRSDRHGPAFFQEMRESIR Sbjct: 481 FDSREGMLITDANSKILRVNKAFTEITGYSAEEIVGKHPNLLRSDRHGPAFFQEMRESIR 540 Query: 541 RFGKWQGEIWDRRKNGEVYPEWLTISAVKNKDQQVTHYVSTHHDISDRKLAEERIRELAF 600 RFGKWQGEIWDRRKNGEVYPEWLTISAVKNKDQQVTHYVSTHHDISDRKLAEERIRELAF Sbjct: 541 RFGKWQGEIWDRRKNGEVYPEWLTISAVKNKDQQVTHYVSTHHDISDRKLAEERIRELAF 600 Query: 601 FDALTRLPNRTLLLDRLKQAIALSLRTKTCAALLFIDLDHFKTLNDTIGHEKGDTLLKQV 660 FDALTRLPNRTLLLDRLKQAIALSLRTKTCAALLFIDLDHFKTLNDTIGHEKGDTLLKQV Sbjct: 601 FDALTRLPNRTLLLDRLKQAIALSLRTKTCAALLFIDLDHFKTLNDTIGHEKGDTLLKQV 660 Query: 661 AQRLLANVRENDTVARVGGDEFVVVLEGLNELQQEAATQTRAIGEKILTALGSTYQLDDV 720 AQRLLANVRENDTVARVGGDEFVVVLEGLNELQQEAATQTRAIGEKILTALGSTYQLDDV Sbjct: 661 AQRLLANVRENDTVARVGGDEFVVVLEGLNELQQEAATQTRAIGEKILTALGSTYQLDDV 720 Query: 721 EYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRNALRFFDPAMQTAVLERATLE 780 EYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRNALRFFDPAMQTAVLERATLE Sbjct: 721 EYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRNALRFFDPAMQTAVLERATLE 780 Query: 781 AGLRKAIDGNQLLLHYQPQVVEGGRVTGAEVLVRWQHPQRGMVPPGDFIPLAEETGLILS 840 AGLRKAIDGNQLLLHYQPQVVEGGRVTGAEVLVRWQHPQRGMVPPGDFIPLAEETGLILS Sbjct: 781 AGLRKAIDGNQLLLHYQPQVVEGGRVTGAEVLVRWQHPQRGMVPPGDFIPLAEETGLILS 840 Query: 841 LGNWVLETACRQLATWAAHPQMADLSIAVNVSAPQLREPDFVQTVLDTIERTGANPRRLK 900 LGNWVLETACRQLATWAA PQMADLSIAVNVSAPQLREPDFVQTVLDTIERTGANPRRLK Sbjct: 841 LGNWVLETACRQLATWAAQPQMADLSIAVNVSAPQLREPDFVQTVLDTIERTGANPRRLK 900 Query: 901 LELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSLSYLKRLPLNQLKIDQSFVR 960 LELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSLSYLKRLPLNQLKIDQSFVR Sbjct: 901 LELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSLSYLKRLPLNQLKIDQSFVR 960 Query: 961 DVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLADAGCHAYQGYFFCRPVTVE 1020 DVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLADAGCHAYQGYFFCRPVTVE Sbjct: 961 DVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLADAGCHAYQGYFFCRPVTVE 1020 Query: 1021 AFEKFAQEFDPQFSAA 1036 AFEKFAQEFDPQFSAA Sbjct: 1021 AFEKFAQEFDPQFSAA 1036 >gi|300312904|ref|YP_003776996.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein [Herbaspirillum seropedicae SmR1] Length = 701 Score = 458 bits (1179), Expect = e-130, Method: Compositional matrix adjust. Identities = 268/673 (39%), Positives = 397/673 (58%), Gaps = 35/673 (5%) Query: 375 WINHAVLDYTGYTVEECLAMD--DFIGTIAHPEDEPRIRAELARCMDGQKREDVELRCVR 432 +++ L TGY E+ L F+ + HPED +R + CM ++R D+E R VR Sbjct: 34 FVSEGCLALTGYLPEDLLLNQRLSFL-ELTHPEDRTLVRNHVDACMRERRRIDIEYRIVR 92 Query: 433 KDGSVFWLALSCAPIHDAQGRFTGFRTSSRDITDRKQI-----EAELRISAVAFDSREGM 487 DG+V W+ I++A G+ +D+T+RK+ EAE R ++ ++ EG+ Sbjct: 93 ADGAVRWVWERGVGIYNANGQVEAIEGFLQDVTERKEAAQALQEAERRYRSIFENAIEGV 152 Query: 488 LITDANSKILRVNKAFTEITGYSAEE--IVGKHPNLLRSDRHGPAFFQEMRESIRRFGKW 545 T + + VN A I GY + E IVG LR H E R+ R + Sbjct: 153 FQTTPDGTYIAVNPALARIYGYHSPEDLIVG-----LRDISHQLYVEPERRQEFMRLMEE 207 Query: 546 QGEIWD-----RRKNGEVYPEWLTISA--VKNKDQQVTHYVSTHHDISDRKLAEERIREL 598 QG + + R++GE+ W++ +A V ++ +++ Y T I++RK E +R Sbjct: 208 QGSVSNFESRVYRRDGEII--WISENARAVYDEAGKLSCYEGTVEAITERKAHEAEMRHQ 265 Query: 599 AFFDALTRLPNRTLLLDRLKQAIALSLRTKTCAALLFIDLDHFKTLNDTIGHEKGDTLLK 658 A DALT LPNR +L + L++A+ ++ + A+ F+DLD FK +ND++GH+ GD LLK Sbjct: 266 ATHDALTGLPNRNMLHEHLQRALRVARQKGALTAVAFVDLDQFKFINDSLGHQVGDELLK 325 Query: 659 QVAQRLLANVRENDTVARVGGDEFVVVLEGLNELQQEAATQTRAIGEKILTALGSTYQLD 718 VAQRL A +RE D VAR GGDEFV+VL+ Q E + ++IL A+ +Q Sbjct: 326 TVAQRLQACLREADMVARQGGDEFVLVLQN----QTEGEAGIAEVMQRILAAVARPWQAG 381 Query: 719 DVEYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRNALRFFDPAMQTAVLERAT 778 D E++ TASIG + + V+ L+K AD AMY+AKE GRN +FF P M + V R Sbjct: 382 DREFQVTASIGVSRYPADGKDVESLLKHADSAMYRAKEQGRNNFQFFAPWMDSQVSNRLE 441 Query: 779 LEAGLRKAIDGNQLLLHYQPQV-VEGGRVTGAEVLVRWQHPQRGMVPPGDFIPLAEETGL 837 + LR+A+D ++ L+YQP++ ++ GR+ GAE L+RW+ PQ+GMVPP FIP AEE GL Sbjct: 442 MLINLRRALDQDEFKLYYQPKLSLQDGRLIGAEALIRWESPQQGMVPPDRFIPFAEEAGL 501 Query: 838 ILSLGNWVLETACRQLATWAAHPQMADLSIAVNVSAPQLRE--PDFVQTVLDTIERTGAN 895 I+ +G WVL TACRQ W + + +AVN+S QL + PDFV VL ++G Sbjct: 502 IVPIGEWVLRTACRQNQAWQ-QAGLPPIPVAVNLSPRQLNQSLPDFVAGVL---AQSGLA 557 Query: 896 PRRLKLELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSLSYLKRLPLNQLKID 955 L+LE+TE++++ + E + + ALK G++ S+DDFGTGYSSLSYL+R P++ LKID Sbjct: 558 ASWLELEITENVVMKDAEKSVATLHALKRLGLQISVDDFGTGYSSLSYLRRFPVDALKID 617 Query: 956 QSFVRDVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLADAGCHAYQGYFFCR 1015 +SFVRD++ D + A+I K I++LA L L VIAEGVE + Q +FL + C QGY+F + Sbjct: 618 KSFVRDIVRDADSAAIVKAIISLAHILNLRVIAEGVEDEEQHAFLKENACDEVQGYYFGK 677 Query: 1016 PVTVEAFEKFAQE 1028 P+ V F + E Sbjct: 678 PMEVAVFTAWMSE 690 >gi|300314042|ref|YP_003778134.1| signal transduction protein containing a membrane domain, an EAL and a GGDEF domain-containing protein [Herbaspirillum seropedicae SmR1] Length = 948 Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust. Identities = 257/583 (44%), Positives = 350/583 (60%), Gaps = 31/583 (5%) Query: 461 SRDITDRKQIEAELRISAVAFD-SREGMLITDA---NSKILRVNKAFTEITGYSAEEIVG 516 S DI R+ E LR+ A + S +LI A + I VN AF ITGYS+ E VG Sbjct: 377 SDDIKARRLAERALRLRHQAIEASANAILILSAQEPDYTIEYVNPAFARITGYSSTEAVG 436 Query: 517 KHPNLLRSDRHGPAFFQE----MRES------IRRFGKWQGEIWDRRKNGEVYPEWLTIS 566 K L P F+ MRE +R + K E+W+ + Y I+ Sbjct: 437 KSIRFLEGRDSDPEGFETVWIAMREQREHNVVLRNYHKDGSELWN-----DFY-----IA 486 Query: 567 AVKNKDQQVTHYVSTHHDISDRKLAEERIRELAFFDALTRLPNRTLLLDRLKQAIALSLR 626 V+++ +VTH+V+ +DI+ K E + A D LT L NR +L L+QAI ++ R Sbjct: 487 PVRDESGEVTHFVAALYDITSMKRYEAELEFQASRDTLTGLINRHMLRHHLEQAIGVAER 546 Query: 627 TKTCAALLFIDLDHFKTLNDTIGHEKGDTLLKQVAQRLLANVRENDTVARVGGDEFVVVL 686 K ++F+DLD FK +NDT+GH+ GDTLL+ VA RL A VRE DTVAR+GGDEF+++L Sbjct: 547 QKQALWVVFVDLDRFKFVNDTLGHKAGDTLLRTVAGRLRAAVREADTVARLGGDEFIMIL 606 Query: 687 EGLNELQQEAATQTRAIGEKILTALGSTYQLDDVEYRTTASIGATVFLGRAASVDELMKQ 746 +EL + TR++ ++I+ A+ + L T S+G + + L+K Sbjct: 607 PEQDELTLD----TRSL-QRIMDAVAAPVTLGGHTLFMTCSVGVACYPNDGTDGETLIKH 661 Query: 747 ADLAMYKAKETGRNALRFFDPAMQTAVLERATLEAGLRKAIDGNQLLLHYQPQV-VEGGR 805 AD+AMY+ K+TGRN +F+ PAM LER +E LR A+D + LLHYQP+V + GR Sbjct: 662 ADIAMYRGKQTGRNNFQFYTPAMNEQALERLRIEGDLRNALDHGEFLLHYQPKVDLASGR 721 Query: 806 VTGAEVLVRWQHPQRGMVPPGDFIPLAEETGLILSLGNWVLETACRQLATWAAHPQMADL 865 V G+E L+RWQHPQ GMV P FI LAEETGLIL +G WVL AC Q W AD+ Sbjct: 722 VIGSEALIRWQHPQLGMVSPARFIGLAEETGLILPIGAWVLRAACTQCRQWQLG-GYADI 780 Query: 866 SIAVNVSAPQLREPDFVQTVLDTIERTGANPRRLKLELTESLLVDNVEDIIQKMFALKAY 925 S++VN+S Q + D V ++ D +E TG P L+LELTESL++ +VE I + LK Sbjct: 781 SVSVNLSVGQFLQKDLVSSIADVLEDTGLPPESLELELTESLMMTDVEHAIGILAGLKKL 840 Query: 926 GVEFSLDDFGTGYSSLSYLKRLPLNQLKIDQSFVRDVLIDPNDASIAKTIVNLAQSLGLG 985 GV S+DDFGTGYSSL+YLKR P++ LKID+SFVRD+ ID +DA+I +I++LA+ L L Sbjct: 841 GVRLSIDDFGTGYSSLAYLKRFPIDVLKIDRSFVRDITIDADDAAITASIISLARHLKLR 900 Query: 986 VIAEGVETDAQRSFLADAGCHAYQGYFFCRPVTVEAFEKFAQE 1028 VIAEGVETD Q +L GC QGY F PV + FE+ ++ Sbjct: 901 VIAEGVETDEQLDYLRHYGCDEIQGYLFSPPVPADKFEQILRQ 943 >gi|300311453|ref|YP_003775545.1| signal transduction containing PAS/GGDEF/EAL domains protein [Herbaspirillum seropedicae SmR1] Length = 683 Score = 367 bits (942), Expect = e-102, Method: Compositional matrix adjust. Identities = 223/567 (39%), Positives = 327/567 (57%), Gaps = 20/567 (3%) Query: 469 QIEAELRISAVAFDS-REGMLITDANSKILRVNKAFTEITGYSAEEIVGKHPNLLRSDRH 527 QIEA+L A + E ++ D I N+ ++ GYSA E +G++ L + Sbjct: 116 QIEAKLEQQAQILNQMHESVITMDPAGFITSWNRGAEQLFGYSAMEAIGRNVLFLYENED 175 Query: 528 GPAFFQEMRESIRRFGKWQGEIWDRRKNGEVYPEWLTISAVKNKDQQVTHYVSTHHDISD 587 ++ G + E+ R+K+GEV+ L++S +++++ + +DI++ Sbjct: 176 EEDSLHDL---FLEHGGREMEVRRRKKSGEVFWASLSLSVMRDQNGHPIGLIGYLNDITE 232 Query: 588 RKLAEERIRELAFFDALTRLPNRTLLLDRLKQAIALSLRTKTCAALLFIDLDHFKTLNDT 647 RK AE+ I LA++DALT LPNRTLL + QA+ + ++FIDL+ FK +NDT Sbjct: 233 RKNAEKLIHHLAYYDALTGLPNRTLLTRTVDQALEEARHENLHGCVMFIDLNRFKPINDT 292 Query: 648 IGHEKGDTLLKQVAQRLLANVRENDTVARVGGDEFVVVLEGLNELQQEAATQTRAIGEKI 707 +GH GD LL +VA RL +RE D VAR+G DEF V L G+++ + +K+ Sbjct: 293 LGHVAGDMLLVEVAMRLRRALREQDVVARLGADEFAVALFGIDK------DSPAYVAQKL 346 Query: 708 LTALGSTYQLDDVEYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRN---ALRF 764 L + +D E R ASIG +++ A + L++ AD+AMY+AK+ G N Sbjct: 347 LALFDDPFFIDGHELRVGASIGVSLYPENATDTETLLRLADIAMYRAKQGGENNEGGYAC 406 Query: 765 FDPAMQTAVLERATLEAGLRKAIDGNQLLLHYQPQV-VEGGRVTGAEVLVRWQHPQRGMV 823 + M L+ +E GL A + N+LLL+YQP+V ++ +TGAE LVRWQHP+RG++ Sbjct: 407 YSEEMNRNTLDLLRIETGLLHAFEYNELLLYYQPKVDMQTLAITGAEALVRWQHPERGLL 466 Query: 824 PPGDFIPLAEETGLILSLGNWVLETACRQLATWAAHPQMADLSIAVNVSAPQLRE--PDF 881 PG+FIP+AEETGLI+ L +WVL+ CRQ W + + IA+NV+A + PD Sbjct: 467 LPGEFIPIAEETGLIVQLSDWVLDAVCRQARAWK-DAGLPPIRIALNVTAREFTRSLPDR 525 Query: 882 VQTVLDTIERTGANPRRLKLELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSL 941 V L ER + L+LE+TES+L+ + + +I M + G+ SLDDFGTGYSSL Sbjct: 526 VGAAL---ERHMLSGEWLELEITESMLMHSTDRVISIMEKICGLGITVSLDDFGTGYSSL 582 Query: 942 SYLKRLPLNQLKIDQSFVRDVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLA 1001 SYLKR P+N LKID+SF + D ND +IA I+ +A+ L VIAEGVE + Q +FL Sbjct: 583 SYLKRFPINTLKIDRSFTMGIPDDTNDCAIASAIIGIAKQLRHKVIAEGVEDEKQFNFLR 642 Query: 1002 DAGCHAYQGYFFCRPVTVEAFEKFAQE 1028 +AGC+ QGY F RPV F E Sbjct: 643 EAGCNELQGYIFSRPVPAPDFHAMLLE 669 >gi|300312606|ref|YP_003776698.1| EAL domain transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 695 Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust. Identities = 199/439 (45%), Positives = 277/439 (63%), Gaps = 8/439 (1%) Query: 591 AEERIRELAFFDALTRLPNRTLLLDRLKQAIALSLRTKTCAALLFIDLDHFKTLNDTIGH 650 A E + ++ D LTRLPNRTLL DRL QAI + R + AL+F+DLD FK +ND++GH Sbjct: 258 ANEELTQMVLHDQLTRLPNRTLLEDRLNQAINKAAREQGHFALMFMDLDGFKAINDSLGH 317 Query: 651 EKGDTLLKQVAQRLLANVRENDTVARVGGDEFVVVLEGLNELQQEAATQTRAIGEKILTA 710 GD LL +VAQRL ++ R NDTVAR+GGDEFV++++ LN + + EK++ A Sbjct: 318 HVGDRLLVEVAQRLTSSSRANDTVARLGGDEFVILVD-LNTPED-----AMGVAEKLVEA 371 Query: 711 LGSTYQLDDVEYRTTASIGATVFLGRAASVDELMKQADLAMYKAKETGRNALRFFDPAMQ 770 + +++D E R +AS+G ++ A+ +L+ AD AMY K +GRN FF+P+M Sbjct: 372 VNQPFKVDQHELRVSASVGIAIYPEDGATRHDLVINADAAMYHTKRSGRNGYHFFEPSMN 431 Query: 771 TAVLERATLEAGLRKAIDGNQLLLHYQPQV-VEGGRVTGAEVLVRWQHPQRGMVPPGDFI 829 ++ LR A++ Q L YQP+ + G V GAE L+RW+HP G+V P FI Sbjct: 432 ANAQQQLQWLQDLRVALERGQFRLVYQPKFSLPAGPVLGAEALLRWEHPVHGLVAPDQFI 491 Query: 830 PLAEETGLILSLGNWVLETACRQLATWAAHPQMADLSIAVNVSAPQLREPDFVQTVLDTI 889 LAE +GLIL +G WVL+ ACRQ+ W A + D +++VN+SA Q +P ++ V T+ Sbjct: 492 GLAERSGLILPIGAWVLDEACRQMREWFALGYV-DWTMSVNLSALQFADPHLLEVVRTTL 550 Query: 890 ERTGANPRRLKLELTESLLVDNVEDIIQKMFALKAYGVEFSLDDFGTGYSSLSYLKRLPL 949 ER P L LE+TES + + E +Q + + GVE S+DDFGTGYSSL YLKRLP Sbjct: 551 ERHQLPPPCLTLEVTESTAMHDTEASLQTLRQIADLGVEISIDDFGTGYSSLLYLKRLPA 610 Query: 950 NQLKIDQSFVRDVLIDPNDASIAKTIVNLAQSLGLGVIAEGVETDAQRSFLADAGCHAYQ 1009 N+LKID+ FVR++ D DA+I IV L ++L L ++AEGVET Q+ FL AGC A Q Sbjct: 611 NELKIDRGFVRELRQDGEDAAIVSAIVALGRTLNLRIVAEGVETVEQQDFLTAAGCDALQ 670 Query: 1010 GYFFCRPVTVEAFEKFAQE 1028 GY RP+T E F + +E Sbjct: 671 GYLMGRPMTPELFLQTMRE 689 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.320 0.134 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 3,143,200 Number of extensions: 133235 Number of successful extensions: 554 Number of sequences better than 1.0e-08: 48 Number of HSP's gapped: 463 Number of HSP's successfully gapped: 48 Length of query: 1036 Length of database: 1,619,870 Length adjustment: 95 Effective length of query: 941 Effective length of database: 1,170,045 Effective search space: 1101012345 Effective search space used: 1101012345 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 136 (57.0 bits)