BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0251.p
         (251 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311050|ref|YP_003775142.1| esterase_lipase superfamily pro...   501   e-143
gi|300310635|ref|YP_003774727.1| 3-ketoadipate enol-lactone hydr...    68   8e-13

>gi|300311050|ref|YP_003775142.1| esterase_lipase superfamily
           protein [Herbaspirillum seropedicae SmR1]
          Length = 251

 Score =  501 bits (1290), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 248/251 (98%), Positives = 248/251 (98%)

Query: 1   MPFAISDQRKIHYQVEGEGPPLLLHHGFTSSLEAWRFFGFTDVLRQHYRVISFDALGHGQ 60
           MPFAISDQRKIHYQVEGEGPPLLLHHGFTSSLEAWRFFGFTDVLRQHYRVISFDALGHGQ
Sbjct: 1   MPFAISDQRKIHYQVEGEGPPLLLHHGFTSSLEAWRFFGFTDVLRQHYRVISFDALGHGQ 60

Query: 61  SDKPHDSAAYSQHQRCRDALAVLDAAQVERTHFFGYSLGGWVGYGLVRQAPERLRSLILG 120
           SDKPHDSAAYSQHQRCRDALAVLDAAQVERTHFFGYSLGGWVGYGLVRQAPERLRSLILG
Sbjct: 61  SDKPHDSAAYSQHQRCRDALAVLDAAQVERTHFFGYSLGGWVGYGLVRQAPERLRSLILG 120

Query: 121 AAHPYEDRSWEVFRGIDGTDPEAFIAAFESLLDEAISPQVKMLIRGNDLVALAAAAQQAR 180
           AAHPYEDRSWEVFRGIDGTDPEAFIAAFE LLDEAISPQVKMLIRGNDLVALAAAAQQAR
Sbjct: 121 AAHPYEDRSWEVFRGIDGTDPEAFIAAFEDLLDEAISPQVKMLIRGNDLVALAAAAQQAR 180

Query: 181 PSQEELLARMDLPCLFFCGDADARHTAVARTAAPLGRAEFVSLPGVTHFGGLMQSALVLP 240
           PSQEELLARMDLPCLFFCGDADARHTAVARTAA L RAEFVSLPGVTHFGGLMQSALVLP
Sbjct: 181 PSQEELLARMDLPCLFFCGDADARHTAVARTAARLARAEFVSLPGVTHFGGLMQSALVLP 240

Query: 241 PVLDFLGRLPG 251
           PVLDFLGRLPG
Sbjct: 241 PVLDFLGRLPG 251


>gi|300310635|ref|YP_003774727.1| 3-ketoadipate enol-lactone
           hydrolase [Herbaspirillum seropedicae SmR1]
          Length = 261

 Score = 67.8 bits (164), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 13/143 (9%)

Query: 1   MPFAISDQRKIHYQVEGEG--PPLLLHHGFTSSLEAWRFFGFTDVLRQHYRVISFDALGH 58
           MPFA  +  ++HYQ+EG+   P L+L +   +SL  W          QH+RV+ +D  GH
Sbjct: 1   MPFANVNAIRLHYQLEGDASLPVLVLSNSLGTSLSMWD--PQMPQWLQHFRVLRYDTRGH 58

Query: 59  GQSDKPHDSAAYSQHQRCRDALAVLDAAQVERTHFFGYSLGGWVGYGLVRQAPERLRSLI 118
           GQS+      + +Q     D +A+LD   + + HF G S+GG     L    P+R+  LI
Sbjct: 59  GQSEVTPGECSIAQ--LGSDVIALLDHLGIAQAHFCGLSMGGSTFMWLAVHHPQRINKLI 116

Query: 119 L-------GAAHPYEDRSWEVFR 134
           L       G A  +  R   V R
Sbjct: 117 LCNTGAKIGTAEAWNSRIETVRR 139


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.139    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 867,104
Number of extensions: 36953
Number of successful extensions: 168
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 172
Number of HSP's successfully gapped: 2
Length of query: 251
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 168
Effective length of database: 1,226,865
Effective search space: 206113320
Effective search space used: 206113320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 129 (54.3 bits)