BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0203.p
         (302 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311008|ref|YP_003775100.1| esterase/lipase/thioesterase fa...   603   e-174
gi|300310447|ref|YP_003774539.1| esterase [Herbaspirillum serope...    71   1e-13
gi|300312950|ref|YP_003777042.1| lipase [Herbaspirillum seropedi...    67   1e-12

>gi|300311008|ref|YP_003775100.1| esterase/lipase/thioesterase
           family protein [Herbaspirillum seropedicae SmR1]
          Length = 302

 Score =  603 bits (1554), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 301/302 (99%), Positives = 302/302 (100%)

Query: 1   MPVPGKAALVLAGATALLGSLIACSPLTAINAVTPASTYLKTDGVAYAGSDNARQQLDIY 60
           MPVPGKAALVLAGATALLGSLIACSPLTAINAVTPASTYLKT+GVAYAGSDNARQQLDIY
Sbjct: 1   MPVPGKAALVLAGATALLGSLIACSPLTAINAVTPASTYLKTEGVAYAGSDNARQQLDIY 60

Query: 61  RPADTASAPPQGRPVVVFFYGGSWNQGSRKDYAFVGEALASRGVIAVLPDYRLYPEVSYP 120
           RPADTASAPPQGRPVVVFFYGGSWNQGSRKDYAFVGEALASRGVIAVLPDYRLYPEVSYP
Sbjct: 61  RPADTASAPPQGRPVVVFFYGGSWNQGSRKDYAFVGEALASRGVIAVLPDYRLYPEVSYP 120

Query: 121 DFLQDSAQAVAWTLRSLQALGGDPQRVFVMGHSAGAYNAAMMALDARWLDAAGATPAQLR 180
           DFLQDSAQAVAWTLRSLQALGGDPQRVFVMGHSAGAYNAAMMALDARWLDAAGATPAQLR
Sbjct: 121 DFLQDSAQAVAWTLRSLQALGGDPQRVFVMGHSAGAYNAAMMALDARWLDAAGATPAQLR 180

Query: 181 GWIGLAGPYDFLPIENPDVKPVFHFPDSPPDSQPVRHVQASAPPALLIASHQDKLVSATR 240
           GWIGLAGPYDFLPIENPDVKPVFHFPDSPPDSQPVRHVQASAPPALLIASHQDKLVSATR
Sbjct: 181 GWIGLAGPYDFLPIENPDVKPVFHFPDSPPDSQPVRHVQASAPPALLIASHQDKLVSATR 240

Query: 241 NTGGLAALLRQHGVPVVETYFDNTSHASLVGSLARPLRFIAPTLDEVSRFIDAPPPRTAG 300
           NTGGLAALLRQHGVPVVETYFDNTSHASLVGSLARPLRFIAPTLDEVSRFIDAPPPRTAG
Sbjct: 241 NTGGLAALLRQHGVPVVETYFDNTSHASLVGSLARPLRFIAPTLDEVSRFIDAPPPRTAG 300

Query: 301 RS 302
           RS
Sbjct: 301 RS 302


>gi|300310447|ref|YP_003774539.1| esterase [Herbaspirillum
           seropedicae SmR1]
          Length = 277

 Score = 70.9 bits (172), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 88/196 (44%), Gaps = 17/196 (8%)

Query: 68  APPQGRPVVVFFYGGSWNQGSRKDYAFVGEALASRGVIAVLPDYRLYPEVSYPDFLQDSA 127
           A   GRP++VF +GG W    +  ++ +      + +   L +YRL P+V   D   D  
Sbjct: 64  AHSNGRPLLVFIHGGYWRSLDKHQFSHLALPYLEQDINVALINYRLAPQVRMGDIAADCG 123

Query: 128 QAVAWTLRSLQALGGDPQRVFVMGHSAGAYNAAMMALDARWLDAAGATPAQLRGWIGLAG 187
           +A+        AL  D   +++MGHSAGA+ A ++A       A  A P  +RG   L+G
Sbjct: 124 RALRLLHAKAPALRVDANAIWLMGHSAGAHLACVIA-------ALRAAP--VRGVCALSG 174

Query: 188 PYDFLPIENPDVKPVFHFPDSPPDSQPVRHVQASAPP---ALLIASHQDKLVSATRNTGG 244
            YD  PI    +    H   SP D Q    +  + P    A+L A  Q+      R    
Sbjct: 175 LYDLEPIRLSYLNEALHL--SPADVQQASPLLLAMPDGVRAVLCAGGQES-EEFLRQRDV 231

Query: 245 LAALLRQ--HGVPVVE 258
            AA LRQ  H V VVE
Sbjct: 232 YAANLRQSGHQVEVVE 247


>gi|300312950|ref|YP_003777042.1| lipase [Herbaspirillum seropedicae
           SmR1]
          Length = 289

 Score = 67.4 bits (163), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 16/159 (10%)

Query: 36  ASTYLKTDGVAYAGSDNARQQLDIYRPADTASAPPQGRPVVVFFYGGSWNQGSRKDYAFV 95
           A T L    ++Y   D   Q+ D YR      A    RP++VF +GG W  G ++D  F+
Sbjct: 50  ADTLLTESDISYG--DAPLQRFDFYR------AEGAQRPLLVFIHGGYWQGGDKRDIGFI 101

Query: 96  GEALASRGVIAVLPDYRLYPEVSYPDFLQDSAQAVAWTLRSLQALGGDPQRVFVMGHSAG 155
                  G+   + +Y L P+    D +++    ++   +  + LG D  R+ +MGHSAG
Sbjct: 102 AAPYVKAGISVAVINYSLAPQARIEDMVKEVQACLSTIAQQAERLGIDVDRISLMGHSAG 161

Query: 156 AYNAAMMALDARWLDAAGATPAQLRGWIGLAGPYDFLPI 194
            + AA +A         G  P Q      ++G +D  P+
Sbjct: 162 GHLAAFVAAQ------PGRMPVQ--AVFAISGVFDLAPL 192


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.134    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,058,911
Number of extensions: 48724
Number of successful extensions: 179
Number of sequences better than 1.0e-08: 6
Number of HSP's gapped: 177
Number of HSP's successfully gapped: 6
Length of query: 302
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 217
Effective length of database: 1,217,395
Effective search space: 264174715
Effective search space used: 264174715
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)