BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0200.p
         (364 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311005|ref|YP_003775097.1| 4-hydroxyphenylpyruvate dioxyge...   744   0.0  
gi|300313061|ref|YP_003777153.1| 4-hydroxyphenylpyruvate dioxyge...   172   3e-44

>gi|300311005|ref|YP_003775097.1| 4-hydroxyphenylpyruvate
           dioxygenase-like protein [Herbaspirillum seropedicae
           SmR1]
          Length = 364

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/364 (99%), Positives = 363/364 (99%)

Query: 1   MGHTETNFAPAASGDLFDNPMGTDGFEFVEYTAADPAAIASVLELMGFTAVARHRSKNVT 60
           MGHTETNFAPAASGDLFDNPMGTDGFEFVEYTAADPAAIA VLELMGFTAVARHRSKNVT
Sbjct: 1   MGHTETNFAPAASGDLFDNPMGTDGFEFVEYTAADPAAIARVLELMGFTAVARHRSKNVT 60

Query: 61  LYRQGQVNFILNGEPGSNAAAFAQVHGASVNAMAFRVKDAAQVYKRALELGAEGVEAKLG 120
           LYRQGQVNFILNGEPGSNAAAFAQVHGASVNAMAFRVKDAAQVYKRALELGAEGVEAKLG
Sbjct: 61  LYRQGQVNFILNGEPGSNAAAFAQVHGASVNAMAFRVKDAAQVYKRALELGAEGVEAKLG 120

Query: 121 PMELNIPAIRGIGGSLLYLVDRYGENGSIYDVDFQFFPGVERNPKGVGLTYIDHLTHNVM 180
           PMELNIPAIRGIGGSLLYLVDRYGENGSIYDVDFQFFPGVERNPKGVGLTYIDHLTHNVM
Sbjct: 121 PMELNIPAIRGIGGSLLYLVDRYGENGSIYDVDFQFFPGVERNPKGVGLTYIDHLTHNVM 180

Query: 181 RGAMDTWSSFYTRLFNFREIKYFDIEGKVTGLRSRAMTSPCGKIRIPINESADDKSQIEE 240
           RGAMDTWSSFYTRLFNFREIKYFDIEGKVTGLRSRAMTSPCGKIRIPINESADDKSQIEE
Sbjct: 181 RGAMDTWSSFYTRLFNFREIKYFDIEGKVTGLRSRAMTSPCGKIRIPINESADDKSQIEE 240

Query: 241 FIKQYNGEGIQHIALGTDDIYQTVRALRERGVPLQDTISTYYDLVERRIPGHGEDLDALR 300
           FIKQYNGEGIQHIALGTDDIYQTVRALRERGVPLQDTISTYYDLVERRIPGHGEDLDALR
Sbjct: 241 FIKQYNGEGIQHIALGTDDIYQTVRALRERGVPLQDTISTYYDLVERRIPGHGEDLDALR 300

Query: 301 ELKILIDGAPTAGQGLLLQIFTQNLIGPVFYEIIQRKGNDGFGEGNFKALFESIELDQMR 360
           ELKILIDGAPTAGQGLLLQIFTQNLIGPVFYEIIQRKGNDGFGEGNFKALFESIELDQMR
Sbjct: 301 ELKILIDGAPTAGQGLLLQIFTQNLIGPVFYEIIQRKGNDGFGEGNFKALFESIELDQMR 360

Query: 361 RGVI 364
           RGVI
Sbjct: 361 RGVI 364


>gi|300313061|ref|YP_003777153.1| 4-hydroxyphenylpyruvate
           dioxygenase [Herbaspirillum seropedicae SmR1]
          Length = 293

 Score =  172 bits (437), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/282 (36%), Positives = 144/282 (51%), Gaps = 20/282 (7%)

Query: 1   MGHTETNFAPAASGDLFDNPMGTDGFEFVEYTAADPAAIASVLELMGFTAVARHRSKNVT 60
           M   E N  P        NP+G DG EF+EY   +P A+ +VLE MGF  V RHRS+ V 
Sbjct: 2   MNTIENNPVPT-------NPLGIDGIEFIEYATTEPLALGAVLERMGFEQVGRHRSREVV 54

Query: 61  LYRQGQVNFILNGEPGSNAAAFAQVHGASVNAMAFRVKDAAQVYKRALELGAEGVEAKLG 120
           LY QG++N I+N +  + A    +V   S++A+A RV+DA + Y+R  ELGA  +  + G
Sbjct: 55  LYTQGEMNVIVNADATAWAGFDHEVQATSLSAIALRVRDANEAYRRVTELGAWAIPTRAG 114

Query: 121 PMELNIPAIRGIGGSLLYLVDRYGENGSIYDVDFQFFPGVERNPKGVGLTYIDHLTHNVM 180
            MELNIP + G G S++Y VDRY  + SIYDVDF+      R    +   +   L   V 
Sbjct: 115 AMELNIPGVHGCGDSIIYFVDRY-RDFSIYDVDFKPASQERRQTSALAGLHFFGLVQAVQ 173

Query: 181 RGAMDTWSSFYTRLFNFREIKYFDIEGKVTGL--RSRAMTSPCGKIRIPINESADDKSQI 238
              +  W  FY+ L  F  +     EG+  G+  +   + SPC +  I + E       I
Sbjct: 174 PDRLREWIDFYSTLMGFSVLP----EGQFFGILPKGSLLVSPCRQFYIQLVEPPAGTEDI 229

Query: 239 EEFIKQYNGEGIQHIALGTDDIYQTVRALRERGVPLQDTIST 280
                 +  E +  + LGT D+ Q VR L+ERGV   D   T
Sbjct: 230 ------HWEEELLRLGLGTPDVLQAVRQLQERGVVFVDRAPT 265


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.140    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,198,406
Number of extensions: 52918
Number of successful extensions: 138
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 136
Number of HSP's successfully gapped: 2
Length of query: 364
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 278
Effective length of database: 1,212,660
Effective search space: 337119480
Effective search space used: 337119480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)