BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0065.p
         (615 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310855|ref|YP_003774947.1| para-aminobenzoate synthetase c...  1211   0.0  
gi|300313182|ref|YP_003777274.1| anthranilate synthase component...   133   5e-32

>gi|300310855|ref|YP_003774947.1| para-aminobenzoate synthetase
           component I protein [Herbaspirillum seropedicae SmR1]
          Length = 660

 Score = 1211 bits (3134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/615 (97%), Positives = 600/615 (97%)

Query: 1   MTDCFALLDDHQASPADPRSRLYTGHVRTLCCTDAAGFAGLLEEMQAALRAGLHAVALWS 60
           M DCFALLDDHQASPADPRSRLYT HVRTLCCTDAAGFAGLLEEMQ ALRAGLHAVALWS
Sbjct: 46  MNDCFALLDDHQASPADPRSRLYTRHVRTLCCTDAAGFAGLLEEMQTALRAGLHAVALWS 105

Query: 61  YELGAALQGLPHHRLLGPLARVLLFARCERLTAAEVDAWLAASCQADGADMFTSGGIANL 120
           YELGAALQGLPHHRL GPLARVLLFA CERL A EVD WLAASCQADGADMFTSGGIANL
Sbjct: 106 YELGAALQGLPHHRLQGPLARVLLFAHCERLAATEVDTWLAASCQADGADMFTSGGIANL 165

Query: 121 RSSVDEAAFSAAIARIRDYIAAGDTYQVNYTYRLHGDVHGDAIGLYRRLRARQPVPYGAL 180
           RSSVDEAAFSAAIARIRDYIAAGDTYQVNYTYRLHGDVHGDAIGLYRRLRARQPVPYGAL
Sbjct: 166 RSSVDEAAFSAAIARIRDYIAAGDTYQVNYTYRLHGDVHGDAIGLYRRLRARQPVPYGAL 225

Query: 181 LRDELGGMVLSCSPELFVSHQQGVLKAKPMKGTARALPPEQEGAETVNAQRALALAADEK 240
           +RDELGGMVLSCSPELFVSHQQGVLKAKPMKGTARALPPEQEGAETVNAQRALALAADEK
Sbjct: 226 VRDELGGMVLSCSPELFVSHQQGVLKAKPMKGTARALPPEQEGAETVNAQRALALAADEK 285

Query: 241 NRAENLMIVDLLRNDLGRVAVPGSVQVPHLFDVRRYGQVLQMTSTIRARLREHATLADTI 300
           NRAENLMIVDLLRNDLGRVAVPGSVQVPHLFDVRRYGQVLQMTSTIRARLREHATLADTI
Sbjct: 286 NRAENLMIVDLLRNDLGRVAVPGSVQVPHLFDVRRYGQVLQMTSTIRARLREHATLADTI 345

Query: 301 NALYPCGSITGAPKRRTMEIIHELESEPRGLYTGAIGWFDAPRPGGPAIGDFCLSVPIRT 360
           NALYPCGSITGAPKRRTMEIIHELESEPRGLYTGAIGWFDAPRPGGPAIGDFCLSVPIRT
Sbjct: 346 NALYPCGSITGAPKRRTMEIIHELESEPRGLYTGAIGWFDAPRPGGPAIGDFCLSVPIRT 405

Query: 361 LELQAPHAGLRKAVMGVGAGIVHDSQAAAEFAECQLKSSFLTGLEKDFALFETLLASQQA 420
           LELQAPHAGLRKAVMGVGAGIVHDSQAAAEFAECQLKSSFLTGLEKDF LFETL ASQQA
Sbjct: 406 LELQAPHAGLRKAVMGVGAGIVHDSQAAAEFAECQLKSSFLTGLEKDFGLFETLHASQQA 465

Query: 421 CRHLDLHLQRLQGSAAALGFPYDEAAIRQHLAATCAGLPANTAHRLRLALDAQGRITIQH 480
           CRHLDLHLQRLQGSAAALGFPYDEAAIRQHLAATCAGLPANT HRLRLALDAQGRITIQH
Sbjct: 466 CRHLDLHLQRLQGSAAALGFPYDEAAIRQHLAATCAGLPANTTHRLRLALDAQGRITIQH 525

Query: 481 APLTPLAGPVKIFLAEPPTDSHDFFLRHKSTRRARYDAAWKEAEQRGGFDMLFFNERNEL 540
           APLTPLAGPVKIFLAE  TDSHD FLRHKSTRRARYDAAWK AEQRGGFDMLFFNER+EL
Sbjct: 526 APLTPLAGPVKIFLAETATDSHDLFLRHKSTRRARYDAAWKAAEQRGGFDMLFFNERDEL 585

Query: 541 TEGGRSNVFVRIAGRWCTPPLSSGVLPGVMRRVLLADPAWDAVEAVITRADLLAAQEIVV 600
           TEGGRSNVFVRIAGRWCTPPLSSGVLPGVMRRVLLADPAWDAVEAVITRADLLAAQEIVV
Sbjct: 586 TEGGRSNVFVRIAGRWCTPPLSSGVLPGVMRRVLLADPAWDAVEAVITRADLLAAQEIVV 645

Query: 601 CNALRGALPAVLVKP 615
           CNALRGALPAVLVKP
Sbjct: 646 CNALRGALPAVLVKP 660


>gi|300313182|ref|YP_003777274.1| anthranilate synthase component I
           protein [Herbaspirillum seropedicae SmR1]
          Length = 498

 Score =  133 bits (334), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 139/276 (50%), Gaps = 25/276 (9%)

Query: 129 FSAAIARIRDYIAAGDTYQVNYTYRLHGDVHGDAIGLYRRLRARQPVPYGALLRDELGGM 188
           +  A+AR ++Y+ AGD  QV    RL        + LYR LR+  P PY        G M
Sbjct: 224 YLKAVARAKEYVMAGDLMQVQIGQRLKKSYVDSPLMLYRALRSLNPSPYMYFYN--FGDM 281

Query: 189 -VLSCSPELFVSHQ-----QGVLKAKPMKGTARALPPEQEGAETVNAQRALALAADEKNR 242
            ++  SPE+ V ++     Q  +  +P+ GT     P     E  + Q A  L AD K  
Sbjct: 282 QIVGASPEILVRNESIGEGQKKITIRPLAGTR----PRGSTIER-DEQLARELLADPKEI 336

Query: 243 AENLMIVDLLRNDLGRVAVPGSVQVPHLFDVRRYGQVLQMTSTIRARLREHATLADTINA 302
           AE++M++DL RND+GR+A  GSV+V     + +Y  V  + S +   L+   +  D + A
Sbjct: 337 AEHVMLIDLARNDIGRIATTGSVKVTDQMVIEKYSHVQHIVSNVEGILKPGMSNLDVLKA 396

Query: 303 LYPCGSITGAPKRRTMEIIHELESEPRGLYTGAIGWFDAPRPGGPAIGDFCLSVPIRTLE 362
            +P G+++GAPK R MEII ELE   RG+Y GA G+           G+  +++ IRT  
Sbjct: 397 TFPAGTLSGAPKVRAMEIIDELEPTKRGIYGGACGYLSFG-------GEMDVAIAIRTGV 449

Query: 363 LQAPHAGLRKAVMGVGAGIVHDSQAAAEFAECQLKS 398
           ++     ++ A     AGIV DS    E+ E + K+
Sbjct: 450 IKDGTLYVQAA-----AGIVADSVPEMEWEETENKA 480


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.136    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 2,024,742
Number of extensions: 90187
Number of successful extensions: 286
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 285
Number of HSP's successfully gapped: 2
Length of query: 615
Length of database: 1,619,870
Length adjustment: 91
Effective length of query: 524
Effective length of database: 1,188,985
Effective search space: 623028140
Effective search space used: 623028140
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 133 (55.8 bits)