BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0274.p
         (356 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310581|ref|YP_003774673.1| glycosyltransferase [Herbaspiri...   713   0.0  
gi|300312063|ref|YP_003776155.1| glycosyltransferase 1 protein [...    74   2e-14

>gi|300310581|ref|YP_003774673.1| glycosyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 349

 Score =  713 bits (1840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/356 (98%), Positives = 349/356 (98%), Gaps = 7/356 (1%)

Query: 1   MRIAIISDAGEPQVNGVVNTLRSTVRCLRALGHEVLLLSPRDFRTFACPTYPEIRLAYQP 60
           MRIAIISDAGEPQVNGVVNTLRSTVRCLRALGHEVLLLSPRDFRTFACPTYPEIRLAYQP
Sbjct: 1   MRIAIISDAGEPQVNGVVNTLRSTVRCLRALGHEVLLLSPRDFRTFACPTYPEIRLAYQP 60

Query: 61  YARIAHIYIYIASALESFQPDCIHIATEGPMGLAARRYCLRRKLSFTTAYHTRFPEYLAA 120
           YARIA       SALESFQPDCIHIATEGPMGLAARRYCLRRKLSFTTAYHTRFPEYLAA
Sbjct: 61  YARIA-------SALESFQPDCIHIATEGPMGLAARRYCLRRKLSFTTAYHTRFPEYLAA 113

Query: 121 RKLLPKALTYRLLRWFHGRSEAIMVPTPAMKTALEEQGFNKVVLWGRGVDTTHFRPAVED 180
           RKLLPKALTYRLLRWFHGRSEAIMVPTPAMKTALEEQGFNKVVLWGRGVDTTHFRPAVED
Sbjct: 114 RKLLPKALTYRLLRWFHGRSEAIMVPTPAMKTALEEQGFNKVVLWGRGVDTTHFRPAVED 173

Query: 181 HACIDRPLFLYVGRVAVEKNIEAFLKLDLPGTKWVVGDGPQLEELTQRYPEVRFLGAKGQ 240
           HACIDRPLFLYVGRVAVEKNIEAFLKLDLPGTKWVVGDGPQLEELTQRYPEVRFLGAKGQ
Sbjct: 174 HACIDRPLFLYVGRVAVEKNIEAFLKLDLPGTKWVVGDGPQLEELTQRYPEVRFLGAKGQ 233

Query: 241 DELPAYYNCADVFVFPSKTDTFGLVLLEAMACGVPVAAYPVEGPIDVVDNGVSGILRHDL 300
           DELPAYYNCADVFVFPSKTDTFGLVLLEAMACGVPVAAYPVEGPIDVVDNGVSGILRHDL
Sbjct: 234 DELPAYYNCADVFVFPSKTDTFGLVLLEAMACGVPVAAYPVEGPIDVVDNGVSGILRHDL 293

Query: 301 RQACLQALTLDRQAVHAHARSRSWESATQQFLQHLHLARRPVADKTAVIKPLRETH 356
           RQACLQALTLDRQAVHAHARSRSWESATQQFLQHLHLARRPVADKTAVIKPLRETH
Sbjct: 294 RQACLQALTLDRQAVHAHARSRSWESATQQFLQHLHLARRPVADKTAVIKPLRETH 349


>gi|300312063|ref|YP_003776155.1| glycosyltransferase 1 protein
           [Herbaspirillum seropedicae SmR1]
          Length = 391

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 105/228 (46%), Gaps = 22/228 (9%)

Query: 131 RLLRWFHGRSEAIMVPTPAMKTALEEQGFN--KVVLWGRGVDTTHFRP----AVEDHACI 184
           +++RW   ++  I+    A++  L   G +  KVV    GVD   FRP    AV     I
Sbjct: 157 KMIRWAADQAAGIITVCNALRDELIVLGADPDKVVALRNGVDLQLFRPLEREAVRRELEI 216

Query: 185 DRPLFLYVGRVAVEKNIEAFLKL--DLPGTKWVV-GDGPQ---LEELTQRY---PEVRFL 235
                L VG +A  K  +  +     LP  + ++ G GP+   LE L  +      VRFL
Sbjct: 217 TGFTLLSVGNLAPVKGHDLTIAALPRLPEARLLIAGSGPEQARLEALAAQLGVRERVRFL 276

Query: 236 GAKGQDELPAYYNCADVFVFPSKTDTFGLVLLEAMACGVPVAAYPVEGPIDVVDNGVSGI 295
           GA  Q  L  YYN AD+ V  S  + +  VLLE+MACG PV A  V G  +VV +  +G+
Sbjct: 277 GALPQSALCRYYNAADMMVLASAREGWANVLLESMACGTPVVASKVWGTPEVVAHPDAGL 336

Query: 296 LRHD-------LRQACLQALTLDRQAVHAHARSRSWESATQQFLQHLH 336
           L  +            LQA    R A   +A   SW++ TQ  LQ  H
Sbjct: 337 LMQERSAAGIAAAVRALQAAAPTRAATRRYAEGFSWDATTQGQLQLFH 384


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.139    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,110,706
Number of extensions: 45606
Number of successful extensions: 161
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 159
Number of HSP's successfully gapped: 2
Length of query: 356
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 270
Effective length of database: 1,212,660
Effective search space: 327418200
Effective search space used: 327418200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 131 (55.1 bits)