BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0184.p
         (386 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310678|ref|YP_003774770.1| phenol/naphthocyclinone hydroxy...   771   0.0  
gi|300310820|ref|YP_003774912.1| naphthocyclinone hydroxylase [H...   374   e-105

>gi|300310678|ref|YP_003774770.1| phenol/naphthocyclinone
           hydroxylase [Herbaspirillum seropedicae SmR1]
          Length = 386

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/386 (99%), Positives = 385/386 (99%)

Query: 1   MSVMENPAALAAREEDALAPLLAEIRARRDEFAAQRFVPKDFIAQLKKAGVYRAATPQCF 60
           MSVMENPAALAAREEDALAPLLAEIRARRDEFAAQRFVPKDFIAQLKKAGVYRAATPQCF
Sbjct: 1   MSVMENPAALAAREEDALAPLLAEIRARRDEFAAQRFVPKDFIAQLKKAGVYRAATPQCF 60

Query: 61  GGSGMSPMGFLQLIERISVADASVGWVASFGSASVYLAALPRETQAKLYAKGPDLTFAGG 120
           GGSGMSPMGFLQLIERIS ADASVGWVASFGSASVYLAALPRETQAKLYAKGPDLTFAGG
Sbjct: 61  GGSGMSPMGFLQLIERISAADASVGWVASFGSASVYLAALPRETQAKLYAKGPDLTFAGG 120

Query: 121 LFPIQPATQVEGGWMVDGTWKFASGSKGADVLGVGIGAAVPGQAGSKPRTAVLPPEQVEI 180
           LFPIQPATQVEGGWMVDGTWKFASGSKGADVLGVGIGAAVPGQAGSKPRTAVLPPEQVEI
Sbjct: 121 LFPIQPATQVEGGWMVDGTWKFASGSKGADVLGVGIGAAVPGQAGSKPRTAVLPPEQVEI 180

Query: 181 IDNWDVMGLLGTGSHDLKVSQQFVPEEWTFIRGGEPTIDEPLYRYPTIAYAAQVLAVVNL 240
           IDNWDVMGLLGTGSHDLKVSQQFVPEEWTFIRGGEPTIDEPLYRYPTIAYAAQVLAVVNL
Sbjct: 181 IDNWDVMGLLGTGSHDLKVSQQFVPEEWTFIRGGEPTIDEPLYRYPTIAYAAQVLAVVNL 240

Query: 241 GVARAAIDEINQMSGGRVAITGAPKLADRSYVRIEVAKAEAKLRSARAFLYDATGEVWHS 300
           GVARAAIDEINQMSGGRVAITGAPKLADRSYVRIEVAKAEAKLRSARAFLYDATGEVW+S
Sbjct: 241 GVARAAIDEINQMSGGRVAITGAPKLADRSYVRIEVAKAEAKLRSARAFLYDATGEVWNS 300

Query: 301 ILAGNPVTPEQVSLLRLTAVEIAKVGNEVTQAMFGLAGTTAIYSNHPLQRYLRDAAVVKQ 360
           ILAGNPVTPEQVSLLRLTAVEIAKVGNEVTQAMFGLAGTTAIYS+HPLQRYLRDAAVVKQ
Sbjct: 301 ILAGNPVTPEQVSLLRLTAVEIAKVGNEVTQAMFGLAGTTAIYSHHPLQRYLRDAAVVKQ 360

Query: 361 HAFLGEGIYDGAGAVTLGVPPMPGFL 386
           HAFLGEGIYDGAGAVTLGVPPMPGFL
Sbjct: 361 HAFLGEGIYDGAGAVTLGVPPMPGFL 386


>gi|300310820|ref|YP_003774912.1| naphthocyclinone hydroxylase
           [Herbaspirillum seropedicae SmR1]
          Length = 394

 Score =  374 bits (961), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/356 (52%), Positives = 246/356 (69%), Gaps = 1/356 (0%)

Query: 21  LLAEIRARRDEFAAQRFVPKDFIAQLKKAGVYRAATPQCFGGSGMSPMGFLQLIERISVA 80
           L+AE+ ARRDEF     VP+D IA +K+AG++R++TP+ FGG  ++P  FL ++ERIS A
Sbjct: 31  LIAEVTARRDEFDQLGHVPRDLIATMKQAGIFRSSTPRRFGGEPLAPAPFLAMVERISRA 90

Query: 81  DASVGWVASFGSASVYLAALPRETQAKLYAKGPDLTFAGGLFPIQPATQVEGGWMVDGTW 140
           D S GWVA+FGSA+ YLAALP ETQ ++YA GPD  +AGGL+P+Q A  V GGW + G W
Sbjct: 91  DGSAGWVAAFGSANTYLAALPIETQRQIYADGPDQVYAGGLYPLQEAKPVPGGWNISGRW 150

Query: 141 KFASGSKGADVLGVGIGAAVPGQAGSKPR-TAVLPPEQVEIIDNWDVMGLLGTGSHDLKV 199
            FASG KGAD +GVGI      +   +P   AV+P  +VEIIDNW+V+G+ GTGSHD ++
Sbjct: 151 HFASGCKGADWIGVGIKDGGGDEGAPRPALMAVMPAAEVEIIDNWNVVGMQGTGSHDTRL 210

Query: 200 SQQFVPEEWTFIRGGEPTIDEPLYRYPTIAYAAQVLAVVNLGVARAAIDEINQMSGGRVA 259
             +FV  EWT  RG    IDEPLYRYP +AY A+V A VN+G+ARAA+D +  M+GG   
Sbjct: 211 KDKFVAHEWTCARGAPGLIDEPLYRYPALAYQAEVHAAVNIGLARAALDIVTDMAGGAKI 270

Query: 260 ITGAPKLADRSYVRIEVAKAEAKLRSARAFLYDATGEVWHSILAGNPVTPEQVSLLRLTA 319
           + GA +LADR+Y +I++  +EAK RSAR F YDA  + W  ILAGNP++ E   +L+L+A
Sbjct: 271 MPGALRLADRAYYKIKLGLSEAKWRSARMFFYDACEQAWEQILAGNPISEETDMMLKLSA 330

Query: 320 VEIAKVGNEVTQAMFGLAGTTAIYSNHPLQRYLRDAAVVKQHAFLGEGIYDGAGAV 375
              A+V  EV    +  AG  AI  +H LQR +RDA VV QHA L E  Y+ AGA+
Sbjct: 331 TYAARVSMEVVNDAYQAAGMAAIQRSHRLQRIVRDAMVVTQHAALSELNYESAGAL 386


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.318    0.135    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,268,679
Number of extensions: 58611
Number of successful extensions: 211
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 210
Number of HSP's successfully gapped: 2
Length of query: 386
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 299
Effective length of database: 1,207,925
Effective search space: 361169575
Effective search space used: 361169575
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)