BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0160.p (202 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300311442|ref|YP_003775534.1| acyl-carrier-protein phosphodie... 410 e-116 gi|300313224|ref|YP_003777316.1| [acyl-carrier-protein] phosphod... 166 2e-42 gi|300309901|ref|YP_003773993.1| acyl carrier protein phosphodie... 156 1e-39 gi|300313768|ref|YP_003777860.1| acyl carrier protein phosphodie... 155 2e-39 gi|300312299|ref|YP_003776391.1| acyl carrier protein phosphodie... 83 2e-17 >gi|300311442|ref|YP_003775534.1| acyl-carrier-protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 202 Score = 410 bits (1055), Expect = e-116, Method: Compositional matrix adjust. Identities = 202/202 (100%), Positives = 202/202 (100%) Query: 1 MSTLLHIDSSARSGGSISRQLTASFVSQWQAKNPGGKVVHRDLAANALPHLSESMLGAYF 60 MSTLLHIDSSARSGGSISRQLTASFVSQWQAKNPGGKVVHRDLAANALPHLSESMLGAYF Sbjct: 1 MSTLLHIDSSARSGGSISRQLTASFVSQWQAKNPGGKVVHRDLAANALPHLSESMLGAYF 60 Query: 61 TPADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFK 120 TPADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFK Sbjct: 61 TPADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFK 120 Query: 121 YTETGPVGLVTGKKAVIILSRGGMYSEGPMEALDFQGKYLKSALGFIGITDVELVVAEGV 180 YTETGPVGLVTGKKAVIILSRGGMYSEGPMEALDFQGKYLKSALGFIGITDVELVVAEGV Sbjct: 121 YTETGPVGLVTGKKAVIILSRGGMYSEGPMEALDFQGKYLKSALGFIGITDVELVVAEGV 180 Query: 181 SMGEEAAKQAVASAEAKINASV 202 SMGEEAAKQAVASAEAKINASV Sbjct: 181 SMGEEAAKQAVASAEAKINASV 202 >gi|300313224|ref|YP_003777316.1| [acyl-carrier-protein] phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 203 Score = 166 bits (419), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 91/182 (50%), Positives = 119/182 (65%), Gaps = 2/182 (1%) Query: 4 LLHIDSSARSGGSISRQLTASFVSQWQAKNPGGKVVHRDLAANALPHLSESMLGAYFTPA 63 LLH+D+S S+SRQL+A V+ ++ P +V++RDLAA A HLS L A+ Sbjct: 3 LLHLDTSILGEHSVSRQLSADIVAHLRSLQPDLEVIYRDLAAAAPRHLSAEHLAAFGGAE 62 Query: 64 DARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFKYTE 123 A +A+ + A +DELL AD +VIG PMYNF+ PS LKAWID V AG TF YT+ Sbjct: 63 VDDPALRAD-LALGQACLDELLQADLLVIGAPMYNFSLPSQLKAWIDRVAVAGTTFAYTD 121 Query: 124 TGPVGLVTGKKAVIILSRGGMYSEGPME-ALDFQGKYLKSALGFIGITDVELVVAEGVSM 182 GP GL+ G++A I RGG Y+EG E ALD Q +YL+ LGF+GI DV +V AEGV+M Sbjct: 122 AGPEGLLKGRRAYIASVRGGQYAEGTAEAALDHQERYLRDLLGFLGIVDVSVVRAEGVAM 181 Query: 183 GE 184 G+ Sbjct: 182 GD 183 >gi|300309901|ref|YP_003773993.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 205 Score = 156 bits (394), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 84/199 (42%), Positives = 115/199 (57%), Gaps = 1/199 (0%) Query: 1 MSTLLHIDSSARSGGSISRQLTASFVSQWQAKNPGGKVVHRDLAANALPHLSESMLGAYF 60 M+ +L I SS R S+S + +A + G V RDL A+ LPH++ + + Sbjct: 1 MTHVLLITSSPRGADSLSSRFATEIAEGIKASSAGTLKV-RDLIADPLPHITSAYIQGRL 59 Query: 61 TPADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFK 120 T + R+ +Q + + LVDEL AAD +VIG M NF P S LKAW DHV TF Sbjct: 60 TAPENRTPDQVAAVALAQELVDELKAADIVVIGSGMINFGPSSQLKAWFDHVTWPSVTFA 119 Query: 121 YTETGPVGLVTGKKAVIILSRGGMYSEGPMEALDFQGKYLKSALGFIGITDVELVVAEGV 180 Y + GP GL+TGKK ++ + GG++SEG A DFQ YL L FIG++DVE+V EG Sbjct: 120 YDDNGPKGLLTGKKTYLVAAAGGVFSEGIWAAFDFQSNYLLHLLSFIGLSDVEMVCVEGT 179 Query: 181 SMGEEAAKQAVASAEAKIN 199 G +AAK A+A+ EA + Sbjct: 180 VFGPDAAKAAIANTEAAVQ 198 >gi|300313768|ref|YP_003777860.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 208 Score = 155 bits (393), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 89/193 (46%), Positives = 120/193 (62%), Gaps = 3/193 (1%) Query: 4 LLHIDSSARSGGSISRQLTASFVSQWQAKNPGGKVVHRDLAANALPHLSESMLGAYFTP- 62 +LH+DSS + S SR L+A+ V + + +P +V RDLAA + HL + + P Sbjct: 3 ILHLDSSILAEASASRVLSAAVVEELRILHPTAQVSVRDLAAAPIAHLDGPIAAGFRQPG 62 Query: 63 ADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFKYT 122 A+ S E S+ LV + L +D IV+GVPMYNF+ PS LKAW+D V + GRTF+YT Sbjct: 63 ANHASPEVRAEQALSETLVSQFLNSDVIVLGVPMYNFSIPSQLKAWLDRVAQPGRTFRYT 122 Query: 123 ETGPVGLVTGKKAVIILS-RGGMYSEGPMEALDFQGKYLKSALGFIGITDVELVVAEGVS 181 E GP+GL +G+KAVII S RGGMYS GP +D Q YLK+ GF+GI V V AE + Sbjct: 123 ENGPLGL-SGEKAVIIASTRGGMYSSGPAAVMDHQEAYLKAFFGFLGIERVRFVRAERLI 181 Query: 182 MGEEAAKQAVASA 194 G E Q++ +A Sbjct: 182 KGAELRSQSMRAA 194 >gi|300312299|ref|YP_003776391.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 208 Score = 82.8 bits (203), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 89/176 (50%), Gaps = 7/176 (3%) Query: 4 LLHIDSSARSGGSISRQLTASFVSQWQAKNPGGKVVHRDLAANALPHLSESMLGA---YF 60 +LHI+SS+R S S QLT F+ + + K+ +V DL + LP E +GA F Sbjct: 3 ILHINSSSRGADSRSLQLTEVFLRELE-KHKAIEVDRFDLFSGELPAFGELAVGAKMAMF 61 Query: 61 TPADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFK 120 T A+A S EQ A+ D +AD VI VP++N P LK +ID V + G F Sbjct: 62 TGAEATS-EQKHAWASIKAVFDRFASADAYVINVPLWNNGLPYVLKQFIDVVTQPGWAFG 120 Query: 121 YT-ETGPVGLVTGKKAVIILSRGGMYSEGPME-ALDFQGKYLKSALGFIGITDVEL 174 + E G GL+ +KA II + G + P DF YL L F+GI + ++ Sbjct: 121 FDLENGYSGLLKNRKACIIHASGVYHPGIPTNFGSDFSTPYLTDWLKFVGIEEADI 176 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.315 0.130 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 581,930 Number of extensions: 23079 Number of successful extensions: 75 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 5 Length of query: 202 Length of database: 1,619,870 Length adjustment: 81 Effective length of query: 121 Effective length of database: 1,236,335 Effective search space: 149596535 Effective search space used: 149596535 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 128 (53.9 bits)