BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0098.p
         (362 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311503|ref|YP_003775595.1| UDP-3-O-3-hydroxymyristoyl gluc...   728   0.0  
gi|300313491|ref|YP_003777583.1| UDP-3-O-[3-hydroxymyristoyl] gl...    95   1e-20

>gi|300311503|ref|YP_003775595.1| UDP-3-O-3-hydroxymyristoyl
           glucosamine N-acyltransferase [Herbaspirillum
           seropedicae SmR1]
          Length = 362

 Score =  728 bits (1880), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/362 (100%), Positives = 362/362 (100%)

Query: 1   MTIRLQQLVERLGGELKGDAQIAVQGIAPLDAAGSSHITFLSNPKFRAQADQTQAAALIL 60
           MTIRLQQLVERLGGELKGDAQIAVQGIAPLDAAGSSHITFLSNPKFRAQADQTQAAALIL
Sbjct: 1   MTIRLQQLVERLGGELKGDAQIAVQGIAPLDAAGSSHITFLSNPKFRAQADQTQAAALIL 60

Query: 61  SEADDAQVQAYAGARIVTRNPYAYFARAAQLFQAMAEIVPPAGIHASAVVDPSASVAADA 120
           SEADDAQVQAYAGARIVTRNPYAYFARAAQLFQAMAEIVPPAGIHASAVVDPSASVAADA
Sbjct: 61  SEADDAQVQAYAGARIVTRNPYAYFARAAQLFQAMAEIVPPAGIHASAVVDPSASVAADA 120

Query: 121 VIGPLVVIEAGAVIGARARIDAGSFIGRHAKVGEDTHFHARVTLHHACEIGARGIVHSGA 180
           VIGPLVVIEAGAVIGARARIDAGSFIGRHAKVGEDTHFHARVTLHHACEIGARGIVHSGA
Sbjct: 121 VIGPLVVIEAGAVIGARARIDAGSFIGRHAKVGEDTHFHARVTLHHACEIGARGIVHSGA 180

Query: 181 VIGADGFGFANEAGQWIKIPQVGRVMIGDDVEIGANTTIDRGALADTVIEEGVKLDNQIQ 240
           VIGADGFGFANEAGQWIKIPQVGRVMIGDDVEIGANTTIDRGALADTVIEEGVKLDNQIQ
Sbjct: 181 VIGADGFGFANEAGQWIKIPQVGRVMIGDDVEIGANTTIDRGALADTVIEEGVKLDNQIQ 240

Query: 241 IAHNCHIGAHTAIAACAGIAGSAKIGKYCSIGGAAMIHGHITIVDKVHVSAGTLALRSIL 300
           IAHNCHIGAHTAIAACAGIAGSAKIGKYCSIGGAAMIHGHITIVDKVHVSAGTLALRSIL
Sbjct: 241 IAHNCHIGAHTAIAACAGIAGSAKIGKYCSIGGAAMIHGHITIVDKVHVSAGTLALRSIL 300

Query: 301 EPGQYTGFYPITEHRDWEKSAALVRNLGTMREKIRALEKSLKTLTQEQAGQAPLSENQEE 360
           EPGQYTGFYPITEHRDWEKSAALVRNLGTMREKIRALEKSLKTLTQEQAGQAPLSENQEE
Sbjct: 301 EPGQYTGFYPITEHRDWEKSAALVRNLGTMREKIRALEKSLKTLTQEQAGQAPLSENQEE 360

Query: 361 NE 362
           NE
Sbjct: 361 NE 362


>gi|300313491|ref|YP_003777583.1| UDP-3-O-[3-hydroxymyristoyl]
           glucosamine N-acyltransferase [Herbaspirillum
           seropedicae SmR1]
          Length = 302

 Score = 94.7 bits (234), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 142/314 (45%), Gaps = 39/314 (12%)

Query: 3   IRLQQLVERLGGELKGDAQIAVQGIAPLDAAGSSHITFLSNPKFRAQADQTQAAALILSE 62
           +R   +   LG  L G   + ++G++ L    +  ++F  N      A       L+L+ 
Sbjct: 4   LRASDIARALGVALSG-PDLVIRGVSSLSIPRAGTLSFRINAW---DARHLPRPILVLAS 59

Query: 63  ADDAQVQAYAGARIVTRNPYAYFARAAQLFQAMAEIVPPAGIHASAVVDPSASVAADAVI 122
           A  +  +A   + I+T +P   +A   +  Q +A  VP  GI +SA++  S ++A    I
Sbjct: 60  ATPSG-EAEGISVIITPHPRQAYAHIVE--QLLAPTVP--GIASSALIGNSVTIAPGVSI 114

Query: 123 GPLVVIEAGAVIGARARIDAGSFIGRHAKVGEDTHFHARVTLHHACEIGARGIVHSGAVI 182
           G  V+IE    IG   RI+ G+ IGR +++G  +   AR                   VI
Sbjct: 115 GEGVIIEDDVQIGENTRIETGALIGRGSRIGARSRIGAR------------------TVI 156

Query: 183 GADGFG-FANEAGQWIKIPQVGRVMIGDDVEIGANTTIDRGALADTVIEEGVKLDNQIQI 241
           G +G G F    GQ   +  +G V IGDDVEIGA   + RG + DTVI     +  Q+ I
Sbjct: 157 GNEGLGSFETADGQLRNVRHLGNVRIGDDVEIGALCAVGRGTIDDTVIGNNTHIGPQVNI 216

Query: 242 AHNCHIGAHTAIAACAGIAGSAKIGKYCSIGGAAMIHGHITIVDKVHVSAG-TLALRSIL 300
            HN  IG    IA  + ++GS  I         A +  + T+ D V + AG T+ + +++
Sbjct: 217 GHNSVIGMRCQIAGRSHLSGSVVIEDE------AKLWANCTLKDGVRIGAGATVGMGALV 270

Query: 301 E----PGQYTGFYP 310
                PGQ     P
Sbjct: 271 NHDVLPGQTVATLP 284


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.319    0.133    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,012,483
Number of extensions: 39805
Number of successful extensions: 198
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 182
Number of HSP's successfully gapped: 3
Length of query: 362
Length of database: 1,619,870
Length adjustment: 86
Effective length of query: 276
Effective length of database: 1,212,660
Effective search space: 334694160
Effective search space used: 334694160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 131 (55.1 bits)