BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0096.p
         (262 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311505|ref|YP_003775597.1| acyl-[acyl-carrier-protein]-UDP...   534   e-153
gi|300313491|ref|YP_003777583.1| UDP-3-O-[3-hydroxymyristoyl] gl...    62   5e-11

>gi|300311505|ref|YP_003775597.1|
           acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
           O-acyltransferase [Herbaspirillum seropedicae SmR1]
          Length = 262

 Score =  534 bits (1376), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 261/262 (99%), Positives = 261/262 (99%)

Query: 1   MSKIHPSAIIAPGAQIDESVEIGAYAVIGADVRIGAGTRIGPHVVIEGHTSIGRDNEIFQ 60
           MSKIHPSAIIAPGAQIDESVEIGAYAVIGADVRIGAGTRIGPHVVIEGHT IGRDNEIFQ
Sbjct: 1   MSKIHPSAIIAPGAQIDESVEIGAYAVIGADVRIGAGTRIGPHVVIEGHTRIGRDNEIFQ 60

Query: 61  FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA 120
           FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA
Sbjct: 61  FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA 120

Query: 121 HDCQLGNNIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 180
           HDCQLGNNIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF
Sbjct: 121 HDCQLGNNIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 180

Query: 181 VTAAGNRAVPAGINSEGLKRRGFTSEQIMEIKRAYKVIYRAGLPLEEAKQELAQMEASSA 240
           VTAAGNRAVPAGINSEGLKRRGFTSEQIMEIKRAYKVIYRAGLPLEEAKQELAQMEASSA
Sbjct: 181 VTAAGNRAVPAGINSEGLKRRGFTSEQIMEIKRAYKVIYRAGLPLEEAKQELAQMEASSA 240

Query: 241 NSAQYIRLFREFIEASARGIIR 262
           NSAQYIRLFREFIEASARGIIR
Sbjct: 241 NSAQYIRLFREFIEASARGIIR 262


>gi|300313491|ref|YP_003777583.1| UDP-3-O-[3-hydroxymyristoyl]
           glucosamine N-acyltransferase [Herbaspirillum
           seropedicae SmR1]
          Length = 302

 Score = 62.0 bits (149), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 4   IHPSAIIAPGAQIDESVEIGAYAVIGADVRIGAGTRIGPHVVIEGHTSIGRDNEIFQFAS 63
           I P   I  G  I++ V+IG    I     IG G+RIG    I   T IG +  +  F +
Sbjct: 108 IAPGVSIGEGVIIEDDVQIGENTRIETGALIGRGSRIGARSRIGARTVIGNEG-LGSFET 166

Query: 64  IGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLAHDC 123
                ++ ++ G    + IGD   I       RGT+ D   T IGN+  I   V++ H+ 
Sbjct: 167 ADGQLRNVRHLGN---VRIGDDVEIGALCAVGRGTIDD---TVIGNNTHIGPQVNIGHNS 220

Query: 124 QLGNNIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPFVTA 183
            +G    +A  + L+G V + D   L    T+     IGA A     A V+ DV P  T 
Sbjct: 221 VIGMRCQIAGRSHLSGSVVIEDEAKLWANCTLKDGVRIGAGATVGMGALVNHDVLPGQTV 280

Query: 184 A 184
           A
Sbjct: 281 A 281


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 768,407
Number of extensions: 30762
Number of successful extensions: 151
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 132
Number of HSP's successfully gapped: 3
Length of query: 262
Length of database: 1,619,870
Length adjustment: 83
Effective length of query: 179
Effective length of database: 1,226,865
Effective search space: 219608835
Effective search space used: 219608835
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)