BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0069.p
         (472 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300311532|ref|YP_003775624.1| nicotinate-nucleotide pyrophosp...   597   e-172

>gi|300311532|ref|YP_003775624.1| nicotinate-nucleotide
           pyrophosphorylase [Herbaspirillum seropedicae SmR1]
          Length = 301

 Score =  597 bits (1539), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 300/301 (99%), Positives = 300/301 (99%)

Query: 172 MTLHALKSASTIAASNLSNPFGPFDAALHAAFDANVNQAIAEDVGDCDYTGLLVPESEFV 231
           MTLHALKSASTIAASNL NPFGPFDAALHAAFDANVNQAIAEDVGDCDYTGLLVPESEFV
Sbjct: 1   MTLHALKSASTIAASNLRNPFGPFDAALHAAFDANVNQAIAEDVGDCDYTGLLVPESEFV 60

Query: 232 KARVIVREAAVLCGAPWFEAVMTRLDPRLQVSWRYAEGERMAADSEVCTIEGPARALLTA 291
           KARVIVREAAVLCGAPWFEAVMTRLDPRLQVSWRYAEGERMAADSEVCTIEGPARALLTA
Sbjct: 61  KARVIVREAAVLCGAPWFEAVMTRLDPRLQVSWRYAEGERMAADSEVCTIEGPARALLTA 120

Query: 292 ERGALNFLQLLSGVASATRRYVDVVQGTRASILDTRKTLPGLRLAQKYAVRVGGGVNQRL 351
           ERGALNFLQLLSGVASATRRYVDVVQGTRASILDTRKTLPGLRLAQKYAVRVGGGVNQRL
Sbjct: 121 ERGALNFLQLLSGVASATRRYVDVVQGTRASILDTRKTLPGLRLAQKYAVRVGGGVNQRL 180

Query: 352 ALYDGILIKENHIAAAGGITAAVAAALKLNAGVSIQVEVESIDELKEALQAGARSILLDN 411
           ALYDGILIKENHIAAAGGITAAVAAALKLNAGVSIQVEVESIDELKEALQAGARSILLDN
Sbjct: 181 ALYDGILIKENHIAAAGGITAAVAAALKLNAGVSIQVEVESIDELKEALQAGARSILLDN 240

Query: 412 FSLEMMREAVTVNAGRALLEASGGINMQTVRAIAETGVDRISIGSLTKDVQATDFSLRVV 471
           FSLEMMREAVTVNAGRALLEASGGINMQTVRAIAETGVDRISIGSLTKDVQATDFSLRVV
Sbjct: 241 FSLEMMREAVTVNAGRALLEASGGINMQTVRAIAETGVDRISIGSLTKDVQATDFSLRVV 300

Query: 472 G 472
           G
Sbjct: 301 G 301


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.324    0.137    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,101,977
Number of extensions: 39391
Number of successful extensions: 178
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 178
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 1,619,870
Length adjustment: 89
Effective length of query: 383
Effective length of database: 1,198,455
Effective search space: 459008265
Effective search space used: 459008265
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 132 (55.5 bits)