BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0495.p
         (152 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300314046|ref|YP_003778138.1| NAD-dependent aldehyde dehydrog...   226   7e-61
gi|300313241|ref|YP_003777333.1| NAD-dependent aldehyde dehydrog...    61   3e-11
gi|300311221|ref|YP_003775313.1| NAD+ dependent acetaldehyde deh...    58   4e-10
gi|300310471|ref|YP_003774563.1| NAD-dependent betaine aldehyde ...    54   5e-09

>gi|300314046|ref|YP_003778138.1| NAD-dependent aldehyde
           dehydrogenase [Herbaspirillum seropedicae SmR1]
          Length = 472

 Score =  226 bits (576), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 128/131 (97%), Positives = 130/131 (99%)

Query: 1   MDRLARLQALMEEHETALIAAIDADFGGRSPHETRMAELFVLRAGLRHAQSHLKRWMRPQ 60
           MDRLARLQALMEEHETALIAAIDADFGGRSPHETRMAELFVLRAGLRHAQSHLKRWMRPQ
Sbjct: 32  MDRLARLQALMEEHETALIAAIDADFGGRSPHETRMAELFVLRAGLRHAQSHLKRWMRPQ 91

Query: 61  RVATALHFLPGSNRLLAQPLGVVGVISPWNYPLQLALGPALAALAAGNRVLLKPSELTPR 120
           RVATALHFLPGSNRLLAQPLGVVGVISPWNYPLQLALGPALAALAAGNRVLLKPSELTPR
Sbjct: 92  RVATALHFLPGSNRLLAQPLGVVGVISPWNYPLQLALGPALAALAAGNRVLLKPSELTPR 151

Query: 121 LSALLADTMAR 131
           LSALLA+ +AR
Sbjct: 152 LSALLAELVAR 162


>gi|300313241|ref|YP_003777333.1| NAD-dependent aldehyde
           dehydrogenase [Herbaspirillum seropedicae SmR1]
          Length = 484

 Score = 61.2 bits (147), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 3/124 (2%)

Query: 4   LARLQALMEEHETALIAAIDADFGGRSPHETRMAELFVLRAGLRHAQSHLKRWMRPQRVA 63
           L +L AL+E  +T L+A +DA   GRSP E RM ++    + LR A     + M  + + 
Sbjct: 72  LHKLAALVE-RDTDLLADMDARAIGRSPMEPRMMDVPNAISHLRAAAGWANQ-MEGRTIP 129

Query: 64  TALHF-LPGSNRLLAQPLGVVGVISPWNYPLQLALGPALAALAAGNRVLLKPSELTPRLS 122
           TA +   P  +  + +P+GVVG I PWN PL +      A LAAG  V++KP+E TP+ +
Sbjct: 130 TAGYMGKPTLSYTVREPIGVVGAILPWNAPLMITSWKVAALLAAGCTVVIKPAEETPQSA 189

Query: 123 ALLA 126
             LA
Sbjct: 190 LHLA 193


>gi|300311221|ref|YP_003775313.1| NAD+ dependent acetaldehyde
           dehydrogenase [Herbaspirillum seropedicae SmR1]
          Length = 506

 Score = 57.8 bits (138), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 42/66 (63%)

Query: 78  QPLGVVGVISPWNYPLQLALGPALAALAAGNRVLLKPSELTPRLSALLADTMARADDGGV 137
           +PLGVVG I PWN+P+ +A+     ALAAGN V+LKP+E TP    +L + +A     GV
Sbjct: 153 EPLGVVGQIIPWNFPILMAVWKLAPALAAGNCVVLKPAEQTPASIMVLIELIADLIPPGV 212

Query: 138 VRVXRA 143
           V + + 
Sbjct: 213 VNIVQG 218


>gi|300310471|ref|YP_003774563.1| NAD-dependent betaine aldehyde
           dehydrogenase [Herbaspirillum seropedicae SmR1]
          Length = 486

 Score = 54.3 bits (129), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 14/124 (11%)

Query: 4   LARLQALMEEHETALIAAIDADFGGRSPHETRMAELFVLRAGLRHAQSHLKRW--MRPQR 61
           L R+ AL+ E       A+  + G    +  R A + +    LR A+ +L  +  +RP+ 
Sbjct: 81  LGRVHALLLERSELFAQALTLEMGAPISY-ARTAHVPLAAEHLRVARDNLADYPFIRPR- 138

Query: 62  VATALHFLPGSNRLLAQPLGVVGVISPWNYPLQLALGPALAALAAGNRVLLKPSELTPRL 121
                    G+  ++ +P+GV  +I+PWN+P+         ALAAG  V+LKPSEL+P L
Sbjct: 139 ---------GTTAIVREPIGVCALITPWNWPIYQITAKVGPALAAGCTVVLKPSELSP-L 188

Query: 122 SALL 125
           SALL
Sbjct: 189 SALL 192


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.325    0.136    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 369,461
Number of extensions: 12879
Number of successful extensions: 82
Number of sequences better than 1.0e-08: 7
Number of HSP's gapped: 83
Number of HSP's successfully gapped: 7
Length of query: 152
Length of database: 1,619,870
Length adjustment: 77
Effective length of query: 75
Effective length of database: 1,255,275
Effective search space: 94145625
Effective search space used: 94145625
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 126 (53.1 bits)