BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0185.p (519 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase... 838 0.0 gi|300310371|ref|YP_003774463.1| sugar ABC transporter ATPase [H... 337 1e-93 gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [H... 298 1e-81 gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [H... 279 4e-76 gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [H... 276 2e-75 >gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 518 Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/416 (98%), Positives = 411/416 (98%) Query: 1 MSEYLLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTW 60 MSEYLLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTW Sbjct: 1 MSEYLLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTW 60 Query: 61 EGEILWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPA 120 EGEILWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPA Sbjct: 61 EGEILWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPA 120 Query: 121 MYRRAEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASE 180 MYRRAEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASE Sbjct: 121 MYRRAEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASE 180 Query: 181 IAVLLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQ 240 I VLLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQ Sbjct: 181 IGVLLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQ 240 Query: 241 MVGREITAMYPERNHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVG 300 MVGREITAMYPERNHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVG Sbjct: 241 MVGREITAMYPERNHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVG 300 Query: 301 AGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDV 360 AGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDV Sbjct: 301 AGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDV 360 Query: 361 GQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGKPAKG 416 GQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGG K Sbjct: 361 GQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGNQQKA 416 Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 5/206 (2%) Query: 21 LNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEILWDGKPLQAHSVRDTE 80 ++ + +R GE +G+ G GAG++ L+ + G Y G +EG++L +GKP S + Sbjct: 280 VDDVSFSVRRGEILGIAGLVGAGRTELVSAIFGAY-RGRYEGQVLLEGKPADTSSPLKSI 338 Query: 81 AAGIVIIHQELM---LVPELSVAENIFMGHEITLP-GGRMNYPAMYRRAEELMRELNMPD 136 G+ ++ ++ +VP+L V +NI + G R++ A + ++ + + + Sbjct: 339 RRGLCMVPEDRKHHGIVPDLDVGQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKT 398 Query: 137 INVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASEIAVLLKIIKDLKARGV 196 LP++ GG+QQ +AK L ++LILDEP+ + A + ++I +L G+ Sbjct: 399 ATPFLPITSLSGGNQQKAVLAKMLLAQPKVLILDEPTRGVDVGAKAEIYRLISELAKAGL 458 Query: 197 ACVYISHKLDEVAEVCDTISVIRDGK 222 A + +S +L EV V D + VI +G+ Sbjct: 459 AIIMVSSELAEVLGVSDRVLVIGEGR 484 >gi|300310371|ref|YP_003774463.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 518 Score = 337 bits (865), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 192/420 (45%), Positives = 279/420 (66%), Gaps = 17/420 (4%) Query: 5 LLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEI 64 +LEM+GI KSF GV+ALN +++ +R GE + GENGAGKSTLMK+LSGVYPHG++ G+I Sbjct: 4 ILEMRGIEKSFPGVKALNNVNLAVREGEIHAIVGENGAGKSTLMKVLSGVYPHGSYSGDI 63 Query: 65 LWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPAMYRR 124 ++ G+ +RD+E GI+IIHQEL LVP LSV EN+F+G+E GG +++ Y R Sbjct: 64 VYKGEVRAFKDIRDSEHLGIIIIHQELALVPLLSVMENLFLGNE-QARGGVIDWEQSYVR 122 Query: 125 AEELMRELNMPDINVALPVSQYGG---GHQQLVEIAKALNKDARLLILDEPSSSLTASEI 181 A+EL+ ++ + + P++Q G G QQL+EIAKAL+K+ +LLILDEP++SL S+ Sbjct: 123 AKELLAKVGLKE----SPLTQVGDLGVGKQQLIEIAKALSKEVKLLILDEPTASLNESDS 178 Query: 182 AVLLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIAT-----TPMQEMDVDK 236 LL+++ +LK +G+A + ISHKL+E+++V D+I+V+RDG + T P+ E D+ Sbjct: 179 DALLELLLELKRQGIASILISHKLNEISKVADSITVLRDGTTVDTFDCRAEPISE---DR 235 Query: 237 IITQMVGREITAMYPERNHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIA 296 II MVGRE+ YP+R+ IGEV+ E R+ + + R + DV+ SVR GEI+GIA Sbjct: 236 IIQHMVGREMADRYPQRDPQIGEVIFEVRDWRVHHPLHTDRLAIKDVNMSVRAGEIVGIA 295 Query: 297 GLVGAGRTELVSAIFG-AYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIV 355 GL+GAGRTEL +IFG AY + GQ L GK D S+ K+I +G+ V EDRK G+V Sbjct: 296 GLMGAGRTELAKSIFGRAYGKKITGQAFLHGKEVDLSTIEKAIAKGIAYVTEDRKGDGLV 355 Query: 356 PDLDVGQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGKPAK 415 + D+ +NI+L L S + ID + E K D +MR++ ++ + +LSGG K Sbjct: 356 LEEDIKKNISLANLGGVSERTVIDEAREYKIAADFKQQMRIRCSSVLQKVVNLSGGNQQK 415 Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 12/227 (5%) Query: 20 ALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEILWDGKPLQAHSVRDT 79 A+ +++ +R GE VG+ G GAG++ L K + G G+ GK + ++ Sbjct: 278 AIKDVNMSVRAGEIVGIAGLMGAGRTELAKSIFGRAYGKKITGQAFLHGKEVDLSTIEKA 337 Query: 80 EAAGIVIIHQELM---LVPELSVAENIFMGHEITLPGGRMNYPAM-----YRRAEELMRE 131 A GI + ++ LV E + +NI + + GG + Y+ A + ++ Sbjct: 338 IAKGIAYVTEDRKGDGLVLEEDIKKNISLAN----LGGVSERTVIDEAREYKIAADFKQQ 393 Query: 132 LNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASEIAVLLKIIKDL 191 + + +V V GG+QQ V ++K L +LILDEP+ + + II L Sbjct: 394 MRIRCSSVLQKVVNLSGGNQQKVVLSKWLFSQPEVLILDEPTRGIDVGAKFEIYNIISKL 453 Query: 192 KARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKII 238 A G + IS ++ E+ +CD I V+ +G+ + P E + I+ Sbjct: 454 AAEGKCIIMISSEMPELLGMCDRIYVMNEGQFVGHLPKAEATQENIM 500 >gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 298 bits (762), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 177/415 (42%), Positives = 259/415 (62%), Gaps = 17/415 (4%) Query: 5 LLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEI 64 ++ ++ + K F GV AL+ ++ GE L GENGAGKSTLMKILSGVY + G+I Sbjct: 22 VIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDS--GDI 79 Query: 65 LWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGR-MNYPAMYR 123 L DGKP++ R +A GI IIHQEL L+ LS A+NIF+G E G ++ + R Sbjct: 80 LLDGKPVEITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDEDELNR 139 Query: 124 RAEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASEIAV 183 +A + + + D++ + PV + QQ+VEIAKAL+ D+R+LI+DEP+++L +EIA Sbjct: 140 QAAAIFARMRL-DMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAE 198 Query: 184 LLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQMVG 243 L +II+DL+A+GV VYISHK+DE+ ++ D +SV+RDGK+IAT PMQE +D II+ MVG Sbjct: 199 LFRIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVG 258 Query: 244 REITA---MYPERNHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVG 300 R + + P+ + +VVLE R + R + + DVSF++R+GEILG AGL+G Sbjct: 259 RALDGEQRIPPDTSR--NDVVLEVRGLN-------RGRAIRDVSFTLRKGEILGFAGLMG 309 Query: 301 AGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDV 360 AGRTE+ AIFGA G++++ G A SP ++ G+ + EDRKH G+ +DV Sbjct: 310 AGRTEVARAIFGA-DPLEAGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDV 368 Query: 361 GQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGKPAK 415 NI L+ + RF+R +D A + Q + ++ +KT + LSGG K Sbjct: 369 QANIALSSMGRFTRVGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQK 423 Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 14/250 (5%) Query: 2 SEYLLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWE 61 ++ +LE++G+ + RA+ + +R GE +G G GAG++ + + + G P Sbjct: 274 NDVVLEVRGLNRG----RAIRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGADP--LEA 327 Query: 62 GEILWDGKPLQAHSVRDTEAAGIVIIHQE---LMLVPELSVAENIF---MGHEITLPGGR 115 GEI+ G S D A GI + ++ L + V NI MG + G Sbjct: 328 GEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSSMGRFTRV--GF 385 Query: 116 MNYPAMYRRAEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSS 175 M+ A+ A+ +R+L + +V GG+QQ + IAK L +D +L DEP+ Sbjct: 386 MDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRG 445 Query: 176 LTASEIAVLLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVD 235 + + + K++ L +G A V IS +L EV + + V+ +G+ + + Sbjct: 446 IDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGELARADATQE 505 Query: 236 KIITQMVGRE 245 KI+ RE Sbjct: 506 KIMQLATQRE 515 >gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 506 Score = 279 bits (714), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 160/421 (38%), Positives = 248/421 (58%), Gaps = 18/421 (4%) Query: 1 MSEYLLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVY-PHGT 59 M +L++ GI K+FG V L G+D+++R GE L GENGAGKSTLMKIL G+ P Sbjct: 1 MEAAMLQLTGIKKNFGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDA- 59 Query: 60 WEGEILWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYP 119 GEI DG+P + S R A G+ ++ QE L+P L +N+F+ E+ G + Sbjct: 60 --GEIRIDGQPCRFDSYRAAIAGGVGVVFQEFSLIPYLDAVDNMFLARELRSRWGWLQRA 117 Query: 120 AMYRRAEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTAS 179 AM RRA+E++ +L + I + +PV + QQ VEIAKAL DAR+L+LDEP+++LT + Sbjct: 118 AMRRRAQEIIGQLGVA-IPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPA 176 Query: 180 EIAVLLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIIT 239 E+ L +++ L+A+GVA ++ISH L+E+ E+CD I+V+RDG ++AT E+D +++ Sbjct: 177 EVEHLFAVMRSLRAQGVAIIFISHHLEEIFEICDRITVLRDGAYVATCATAEVDQARLVE 236 Query: 240 QMVGREITAMYPER----NHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGI 295 MVGR I +P + GEVVLE + R++ F +RRGEILG Sbjct: 237 MMVGRRIENCFPPKPAKGGEGEGEVVLEVHALQL-------RRQAPVSQFQLRRGEILGF 289 Query: 296 AGLVGAGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIV 355 AGLVG+GRTE V A+ GA+ ++ + G P + P ++++ G+ ++PE RK G++ Sbjct: 290 AGLVGSGRTETVLAMLGAH-AALSCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLI 348 Query: 356 PDLDVGQNITLTVLNRFSRGS-RIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGKPA 414 + N++L ++ G +D E + + + R+RVK + + +LSGG Sbjct: 349 TSFSILHNVSLNNYGKYRLGGLFLDRRREQQATEAAMQRVRVKAPGAQVRVDTLSGGNQQ 408 Query: 415 K 415 K Sbjct: 409 K 409 Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 17/226 (7%) Query: 25 DIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEILWDGKPLQAHSVRDTEAAGI 84 ++R GE +G G G+G++ +L+ + H ++ G PL+ AGI Sbjct: 278 QFQLRRGEILGFAGLVGSGRTE--TVLAMLGAHAALSCKLSMHGVPLRFADPAQALQAGI 335 Query: 85 VII---HQELMLVPELSVAENIFMGHEITLPGGRMNYPAMY--RRAEELMRELNMPDINV 139 ++ +E L+ S+ N+ + + G+ ++ RR E+ E M + V Sbjct: 336 GLLPESRKEQGLITSFSILHNVSLNNY-----GKYRLGGLFLDRRREQQATEAAMQRVRV 390 Query: 140 ALP-----VSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASEIAVLLKIIKDLKAR 194 P V GG+QQ V IA+ +N ++LI DEP+ + + + +++++ A+ Sbjct: 391 KAPGAQVRVDTLSGGNQQKVVIARWINHAMKVLIFDEPTRGIDVGAKSEIYQLMREFTAQ 450 Query: 195 GVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQ 240 G + + IS +L EV + D + V R G +AT + ++ ++I+T Sbjct: 451 GYSILMISSELPEVVGMADRVCVFRGGGIVATLEGEAVNAEEIMTH 496 >gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 521 Score = 276 bits (707), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 164/415 (39%), Positives = 242/415 (58%), Gaps = 15/415 (3%) Query: 5 LLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEI 64 LL+M+GI KSFG AL+ + + IRPGE L GENGAGKSTLMK+LSGV H +GEI Sbjct: 6 LLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGV--HAPDQGEI 63 Query: 65 LWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPAMYRR 124 L DG+P+ + AAGI +I+QEL + P +SVA N+FMG E+ G +++ AM R Sbjct: 64 LLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSR 123 Query: 125 AEELMRELNM----PDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASE 180 + ++R+L D+ L +++ QQ VEIA+AL +R++I+DEP+++L+ E Sbjct: 124 TDAVLRQLGAGFGASDLAGRLSIAE-----QQQVEIARALVHRSRIVIMDEPTAALSERE 178 Query: 181 IAVLLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQ 240 L +++ L+ G+A +YISH++ EV + D ++V+RDG + E+D ++I+ Sbjct: 179 TEQLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQM 238 Query: 241 MVGREITAMYPERNHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVG 300 MVGR ++ Y + A + A+ T + ++ SF VR GE+LG AGLVG Sbjct: 239 MVGRSLSEFYQHQRIAPADA---AQLPTVMQVRALAGGKIRPASFDVRAGEVLGFAGLVG 295 Query: 301 AGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDV 360 AGRTEL +FGA R G +LLEG+P P ++R G+ VPEDRK G+ + V Sbjct: 296 AGRTELARLLFGA-DPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAV 354 Query: 361 GQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGKPAK 415 N T+ V +R +R + + + I R+ VK A P P+ LSGG K Sbjct: 355 AANATMNVASRHTRLGLVRSRSLGGVARAAIQRLNVKVAHPETPVGKLSGGNQQK 409 Score = 86.3 bits (212), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 27/221 (12%) Query: 18 VRALNGIDIK-----IRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEILWDGKPLQ 72 VRAL G I+ +R GE +G G GAG++ L ++L G P G+IL +G+P+ Sbjct: 267 VRALAGGKIRPASFDVRAGEVLGFAGLVGAGRTELARLLFGADPRSG--GDILLEGRPVH 324 Query: 73 AHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPAMYRR-------- 124 R AGI VPE + +F+ + MN + + R Sbjct: 325 IDQPRAAMRAGIA-------YVPEDRKGQGLFLQMAVA-ANATMNVASRHTRLGLVRSRS 376 Query: 125 ----AEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASE 180 A ++ LN+ + PV + GG+QQ V +A+ L ++LILDEP+ + Sbjct: 377 LGGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYA 436 Query: 181 IAVLLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDG 221 + + +++ L ++GVA V IS +L EV +CD + V+R+G Sbjct: 437 KSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREG 477 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.319 0.138 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,468,295 Number of extensions: 60566 Number of successful extensions: 739 Number of sequences better than 1.0e-08: 117 Number of HSP's gapped: 524 Number of HSP's successfully gapped: 132 Length of query: 519 Length of database: 1,619,870 Length adjustment: 89 Effective length of query: 430 Effective length of database: 1,198,455 Effective search space: 515335650 Effective search space used: 515335650 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)