BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0175.p (208 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300313768|ref|YP_003777860.1| acyl carrier protein phosphodie... 414 e-117 gi|300313224|ref|YP_003777316.1| [acyl-carrier-protein] phosphod... 174 5e-45 gi|300311442|ref|YP_003775534.1| acyl-carrier-protein phosphodie... 156 1e-39 gi|300309901|ref|YP_003773993.1| acyl carrier protein phosphodie... 97 9e-22 gi|300312299|ref|YP_003776391.1| acyl carrier protein phosphodie... 65 5e-12 >gi|300313768|ref|YP_003777860.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 208 Score = 414 bits (1063), Expect = e-117, Method: Compositional matrix adjust. Identities = 206/208 (99%), Positives = 207/208 (99%) Query: 1 MKILHLDSSILAEASASRVLSAAVVEELRILHPTAQVSVRDLAAAPIAHLDGPIAAGFRQ 60 MKILHLDSSILAEASASRVLSAAVVEELRILHPTAQVSVRDLAAAPIAHLDGPIAAGFRQ Sbjct: 1 MKILHLDSSILAEASASRVLSAAVVEELRILHPTAQVSVRDLAAAPIAHLDGPIAAGFRQ 60 Query: 61 PGANHASPEVRAEQALSETLVSQFLDSDVIVLGVPMYNFSIPSQLKAWLDRVAQPGRTFR 120 PGANHASPEVRAEQALSETLVSQFL+SDVIVLGVPMYNFSIPSQLKAWLDRVAQPGRTFR Sbjct: 61 PGANHASPEVRAEQALSETLVSQFLNSDVIVLGVPMYNFSIPSQLKAWLDRVAQPGRTFR 120 Query: 121 YTENGPLGLSGEKAVIIASTRGGMYSSGPAAVMDHQEAYLKAFFGFLGIERVRFVRAERL 180 YTENGPLGLSGEKAVIIASTRGGMYSSGPAAVMDHQEAYLKAFFGFLGIERVRFVRAERL Sbjct: 121 YTENGPLGLSGEKAVIIASTRGGMYSSGPAAVMDHQEAYLKAFFGFLGIERVRFVRAERL 180 Query: 181 TKGAELRSQSMRAALDEVPSVVAGLFAN 208 KGAELRSQSMRAALDEVPSVVAGLFAN Sbjct: 181 IKGAELRSQSMRAALDEVPSVVAGLFAN 208 >gi|300313224|ref|YP_003777316.1| [acyl-carrier-protein] phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 203 Score = 174 bits (441), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 96/184 (52%), Positives = 117/184 (63%), Gaps = 3/184 (1%) Query: 1 MKILHLDSSILAEASASRVLSAAVVEELRILHPTAQVSVRDLAAAPIAHLDGPIAAGFRQ 60 MK+LHLD+SIL E S SR LSA +V LR L P +V RDLAAA HL A F Sbjct: 1 MKLLHLDTSILGEHSVSRQLSADIVAHLRSLQPDLEVIYRDLAAAAPRHLSAEHLAAF-- 58 Query: 61 PGANHASPEVRAEQALSETLVSQFLDSDVIVLGVPMYNFSIPSQLKAWLDRVAQPGRTFR 120 GA P +RA+ AL + + + L +D++V+G PMYNFS+PSQLKAW+DRVA G TF Sbjct: 59 GGAEVDDPALRADLALGQACLDELLQADLLVIGAPMYNFSLPSQLKAWIDRVAVAGTTFA 118 Query: 121 YTENGPLGLSGEKAVIIASTRGGMYSSGPA-AVMDHQEAYLKAFFGFLGIERVRFVRAER 179 YT+ GP GL + IAS RGG Y+ G A A +DHQE YL+ GFLGI V VRAE Sbjct: 119 YTDAGPEGLLKGRRAYIASVRGGQYAEGTAEAALDHQERYLRDLLGFLGIVDVSVVRAEG 178 Query: 180 LTKG 183 + G Sbjct: 179 VAMG 182 >gi|300311442|ref|YP_003775534.1| acyl-carrier-protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 202 Score = 156 bits (395), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 89/193 (46%), Positives = 121/193 (62%), Gaps = 3/193 (1%) Query: 3 ILHLDSSILAEASASRVLSAAVVEELRILHPTAQVSVRDLAAAPIAHLDGPIAAGFRQPG 62 +LH+DSS + S SR L+A+ V + + +P +V RDLAA + HL + + P Sbjct: 4 LLHIDSSARSGGSISRQLTASFVSQWQAKNPGGKVVHRDLAANALPHLSESMLGAYFTP- 62 Query: 63 ANHASPEVRAEQALSETLVSQFLDSDVIVLGVPMYNFSIPSQLKAWLDRVAQPGRTFRYT 122 A+ S E S+ LV + L +D IV+GVPMYNF+ PS LKAW+D V + GRTF+YT Sbjct: 63 ADARSAEQAEVIKQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFKYT 122 Query: 123 ENGPLGL-SGEKAVIIASTRGGMYSSGPAAVMDHQEAYLKAFFGFLGIERVRFVRAERLT 181 E GP+GL +G+KAVII S RGGMYS GP +D Q YLK+ GF+GI V V AE ++ Sbjct: 123 ETGPVGLVTGKKAVIILS-RGGMYSEGPMEALDFQGKYLKSALGFIGITDVELVVAEGVS 181 Query: 182 KGAELRSQSMRAA 194 G E Q++ +A Sbjct: 182 MGEEAAKQAVASA 194 >gi|300309901|ref|YP_003773993.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 205 Score = 97.1 bits (240), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 56/150 (37%), Positives = 80/150 (53%), Gaps = 3/150 (2%) Query: 37 VSVRDLAAAPIAHLDGPIAAGFRQPGANHASPEVRAEQALSETLVSQFLDSDVIVLGVPM 96 + VRDL A P+ H+ G R + +P+ A AL++ LV + +D++V+G M Sbjct: 37 LKVRDLIADPLPHITSAYIQG-RLTAPENRTPDQVAAVALAQELVDELKAADIVVIGSGM 95 Query: 97 YNFSIPSQLKAWLDRVAQPGRTFRYTENGPLG-LSGEKAVIIASTRGGMYSSGPAAVMDH 155 NF SQLKAW D V P TF Y +NGP G L+G+K ++A+ GG++S G A D Sbjct: 96 INFGPSSQLKAWFDHVTWPSVTFAYDDNGPKGLLTGKKTYLVAAA-GGVFSEGIWAAFDF 154 Query: 156 QEAYLKAFFGFLGIERVRFVRAERLTKGAE 185 Q YL F+G+ V V E G + Sbjct: 155 QSNYLLHLLSFIGLSDVEMVCVEGTVFGPD 184 >gi|300312299|ref|YP_003776391.1| acyl carrier protein phosphodiesterase [Herbaspirillum seropedicae SmR1] Length = 208 Score = 64.7 bits (156), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 12/178 (6%) Query: 1 MKILHLDSSILAEASASRVLSAAVVEELRILHPTAQVSVRDLAAAPIAHLDGPIAAGFRQ 60 MKILH++SS S S L+ + EL H +V DL + + G +A G + Sbjct: 1 MKILHINSSSRGADSRSLQLTEVFLRELE-KHKAIEVDRFDLFSGELPAF-GELAVGAKM 58 Query: 61 ---PGANHASPEVRAEQALSETLVSQFLDSDVIVLGVPMYNFSIPSQLKAWLDRVAQPGR 117 GA A+ E + A + + +F +D V+ VP++N +P LK ++D V QPG Sbjct: 59 AMFTGAE-ATSEQKHAWASIKAVFDRFASADAYVINVPLWNNGLPYVLKQFIDVVTQPGW 117 Query: 118 TFRYT-ENGPLG-LSGEKAVIIASTRGGMYSSGPAAVM--DHQEAYLKAFFGFLGIER 171 F + ENG G L KA II ++ G+Y G D YL + F+GIE Sbjct: 118 AFGFDLENGYSGLLKNRKACIIHAS--GVYHPGIPTNFGSDFSTPYLTDWLKFVGIEE 173 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.319 0.133 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 625,297 Number of extensions: 25625 Number of successful extensions: 102 Number of sequences better than 1.0e-08: 5 Number of HSP's gapped: 99 Number of HSP's successfully gapped: 5 Length of query: 208 Length of database: 1,619,870 Length adjustment: 81 Effective length of query: 127 Effective length of database: 1,236,335 Effective search space: 157014545 Effective search space used: 157014545 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 128 (53.9 bits)