BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0104.p
         (323 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300313707|ref|YP_003777799.1| alpha-D-mannose-alpha(1-6)phosp...   635   0.0  
gi|300313705|ref|YP_003777797.1| glycosyltransferase [Herbaspiri...   462   e-131

>gi|300313707|ref|YP_003777799.1|
           alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol
           monomannoside transferase [Herbaspirillum seropedicae
           SmR1]
          Length = 348

 Score =  635 bits (1639), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/310 (99%), Positives = 308/310 (99%)

Query: 1   MKILLLNDEFYTTGASIAMLRLAERLVQQHEVMVMPRRDGEGEIRKQFEALGIPIVHNVT 60
           MKILLLNDEFYTTGASIAMLRLAERLVQQHEVMVMPRRDGEGEIRKQFEALGIPIVHNVT
Sbjct: 1   MKILLLNDEFYTTGASIAMLRLAERLVQQHEVMVMPRRDGEGEIRKQFEALGIPIVHNVT 60

Query: 61  TVDVVVANTLMAGLHVAEAGPKVPVVWWIHEAEVGRDLILRFPALAPAFQHASQIVFQTS 120
           TVDVVVANTLMAGLHVAEAGPKVPVVWWIHEAEVGRDLILRFPALAPAFQHASQIVFQTS
Sbjct: 61  TVDVVVANTLMAGLHVAEAGPKVPVVWWIHEAEVGRDLILRFPALAPAFQHASQIVFQTS 120

Query: 121 YQQKVYQSFLFDSPASCHVLPFWNDAIYRQEDLGPKPKRGKRIVCIGTIEPRKRMEDTVL 180
           YQQKVYQSFLFDSPASCHVLPFWNDAIYRQEDLGPKPKRGKRIVCIGTIEPRKRMEDTVL
Sbjct: 121 YQQKVYQSFLFDSPASCHVLPFWNDAIYRQEDLGPKPKRGKRIVCIGTIEPRKRMEDTVL 180

Query: 181 AVEAMPPALREEVECVFIGKYLELPEHARRIADAAPQRYRFLGEQANDEVLRYLASADAY 240
           AVEAMPPALREEVECVFIGKYLELPE ARRIADAAPQRYRFLGEQANDEVLRYLASAD Y
Sbjct: 181 AVEAMPPALREEVECVFIGKYLELPEQARRIADAAPQRYRFLGEQANDEVLRYLASADTY 240

Query: 241 VLASYSESQPLSIWEAFELEVPVCLSDLETYGHIGLQHGRNALMHPVGQTAVLSANLQQL 300
           VLASYSESQPLSIWEAFELEVPVCLSDLETYGHIGLQHGRNALMHPVGQTAVLSANLQQL
Sbjct: 241 VLASYSESQPLSIWEAFELEVPVCLSDLETYGHIGLQHGRNALMHPVGQTAVLSANLQQL 300

Query: 301 LTRPTLAREL 310
           LTRPTLAREL
Sbjct: 301 LTRPTLAREL 310


>gi|300313705|ref|YP_003777797.1| glycosyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 349

 Score =  462 bits (1190), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/311 (70%), Positives = 259/311 (83%), Gaps = 1/311 (0%)

Query: 1   MKILLLNDEFYTTGASIAMLRLAERLVQQHEVMVMPRRDGEGEIRKQFEALGIPIVHNVT 60
           MKILLLNDEFYTTGAS AMLRLAERLVQ HEV V+PR DG+GEIRKQFEALGIPIV ++ 
Sbjct: 1   MKILLLNDEFYTTGASTAMLRLAERLVQNHEVSVLPRIDGQGEIRKQFEALGIPIVKDLA 60

Query: 61  TV-DVVVANTLMAGLHVAEAGPKVPVVWWIHEAEVGRDLILRFPALAPAFQHASQIVFQT 119
              D++V+N +++G  V E  P+ PV+WW+HEAEVGRDL+LR+P +A  F+ AS IVFQT
Sbjct: 61  GEPDLIVSNCILSGSLVGELAPRCPVIWWVHEAEVGRDLLLRYPQMAQGFKSASHIVFQT 120

Query: 120 SYQQKVYQSFLFDSPASCHVLPFWNDAIYRQEDLGPKPKRGKRIVCIGTIEPRKRMEDTV 179
            +Q+ VY SFLFDSPA  HVLPFWNDAIYRQ+DL PKPK  KRIVCIGTIEPRKRMEDT+
Sbjct: 121 EFQRIVYGSFLFDSPAMVHVLPFWNDAIYRQQDLQPKPKDKKRIVCIGTIEPRKRMEDTI 180

Query: 180 LAVEAMPPALREEVECVFIGKYLELPEHARRIADAAPQRYRFLGEQANDEVLRYLASADA 239
           LAV AM  A R E+ECVFIGKYL+L + AR++A+A P+RYRFLGEQ N+E LRYLASADA
Sbjct: 181 LAVNAMSSAQRAEIECVFIGKYLQLGDGARKLAEALPERYRFLGEQPNEETLRYLASADA 240

Query: 240 YVLASYSESQPLSIWEAFELEVPVCLSDLETYGHIGLQHGRNALMHPVGQTAVLSANLQQ 299
           YVLAS SESQPL+IWEAFELEVPVCLSDLETY HIGL+HG NA+MHP+G   +L++NLQ 
Sbjct: 241 YVLASSSESQPLTIWEAFELEVPVCLSDLETYRHIGLKHGVNAMMHPMGNMELLASNLQM 300

Query: 300 LLTRPTLAREL 310
           +L    + R +
Sbjct: 301 VLYHDDVRRRI 311


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.322    0.137    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 993,143
Number of extensions: 40057
Number of successful extensions: 107
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 106
Number of HSP's successfully gapped: 2
Length of query: 323
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 238
Effective length of database: 1,217,395
Effective search space: 289740010
Effective search space used: 289740010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 131 (55.1 bits)