BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0510.p (529 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [H... 1049 0.0 gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [H... 437 e-124 gi|300311609|ref|YP_003775701.1| sugar ABC transporter ATPase [H... 402 e-113 gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [H... 399 e-112 gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase... 393 e-110 >gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 1049 bits (2713), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/520 (99%), Positives = 519/520 (99%) Query: 10 MQEDKETSTTGVAASSSSSVPVIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAG 69 MQEDKETSTTGVAASSSSSVPVIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAG Sbjct: 1 MQEDKETSTTGVAASSSSSVPVIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAG 60 Query: 70 KSTLMKILSGVYQRDSGDILLDGKPVDITEPRQAQALGIGIIHQELNLMNHLSAAQNIFI 129 KSTLMKILSGVYQRDSGDILLDGKPV+ITEPRQAQALGIGIIHQELNLMNHLSAAQNIFI Sbjct: 61 KSTLMKILSGVYQRDSGDILLDGKPVEITEPRQAQALGIGIIHQELNLMNHLSAAQNIFI 120 Query: 130 GREPRKAMGLFIDEDELNRQAAAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSR 189 GREPRKAMGLFIDEDELNRQAAAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSR Sbjct: 121 GREPRKAMGLFIDEDELNRQAAAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSR 180 Query: 190 VLIMDEPTAALNNAEIAELFRIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIA 249 VLIMDEPTAALNNAEIAELFRIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIA Sbjct: 181 VLIMDEPTAALNNAEIAELFRIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIA 240 Query: 250 TVPMQETSMDTIISMMVGRALDGEQRIPPDTSRNDVVLEVRGLNRGRAIRDVSFTLRKGE 309 TVPMQETSMDTIISMMVGRALDGEQRIPPDTSRNDVVLEVRGLNRGRAIRDVSFTLRKGE Sbjct: 241 TVPMQETSMDTIISMMVGRALDGEQRIPPDTSRNDVVLEVRGLNRGRAIRDVSFTLRKGE 300 Query: 310 ILGFAGLMGAGRTEVARAIFGADPLEAGEIIIHGGNAVIKSPADAVAHGIGYLSEDRKHF 369 ILGFAGLMGAGRTEVARAIFGADPLEAGEIIIHGG AVIKSPADAVAHGIGYLSEDRKHF Sbjct: 301 ILGFAGLMGAGRTEVARAIFGADPLEAGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHF 360 Query: 370 GLAVGMDVQANIALSSMGRFTRLGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGN 429 GLAVGMDVQANIALSSMGRFTR+GFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGN Sbjct: 361 GLAVGMDVQANIALSSMGRFTRVGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGN 420 Query: 430 QQKIVIAKWLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLR 489 QQKIVIAKWLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLR Sbjct: 421 QQKIVIAKWLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLR 480 Query: 490 MSHRVLVMCEGRITGELARADATQEKIMQLATQRESAVAS 529 MSHRVLVMCEGRITGELARADATQEKIMQLATQRESAVAS Sbjct: 481 MSHRVLVMCEGRITGELARADATQEKIMQLATQRESAVAS 520 >gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 521 Score = 437 bits (1125), Expect = e-124, Method: Compositional matrix adjust. Identities = 237/499 (47%), Positives = 330/499 (66%), Gaps = 6/499 (1%) Query: 27 SSVPVIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSG 86 + P++ +R + K F LAL + + GE+HALMGENGAGKSTLMK+LSGV+ D G Sbjct: 2 TQTPLLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQG 61 Query: 87 DILLDGKPVDITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDEDEL 146 +ILLDG+PV + +P ++A GI +I+QEL + ++S A N+F+G E R +GL ID + Sbjct: 62 EILLDGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGL-IDHAAM 120 Query: 147 NRQAAAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIA 206 + A+ ++ S G L++A QQ VEIA+AL SR++IMDEPTAAL+ E Sbjct: 121 RSRTDAVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETE 180 Query: 207 ELFRIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMV 266 +LF ++R L+ +G+ I+YISH+M E+ +ADRV+V+RDG ++ + E + I+ MMV Sbjct: 181 QLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMV 240 Query: 267 GRALD---GEQRIPP-DTSRNDVVLEVRGLNRGRAIRDVSFTLRKGEILGFAGLMGAGRT 322 GR+L QRI P D ++ V++VR L G+ IR SF +R GE+LGFAGL+GAGRT Sbjct: 241 GRSLSEFYQHQRIAPADAAQLPTVMQVRALAGGK-IRPASFDVRAGEVLGFAGLVGAGRT 299 Query: 323 EVARAIFGADPLEAGEIIIHGGNAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIA 382 E+AR +FGADP G+I++ G I P A+ GI Y+ EDRK GL + M V AN Sbjct: 300 ELARLLFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANAT 359 Query: 383 LSSMGRFTRLGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRD 442 ++ R TRLG + R++ A+ +++L +K E LSGGNQQK+++A+WL Sbjct: 360 MNVASRHTRLGLVRSRSLGGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIA 419 Query: 443 CDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRI 502 +L DEPTRG+D+ AKSEIY+L+ LA QG A+V+ISSELPEV+ + RVLVM EG I Sbjct: 420 PKVLILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMI 479 Query: 503 TGELARADATQEKIMQLAT 521 TGELA A TQE IM+LAT Sbjct: 480 TGELAGAAITQENIMRLAT 498 Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/242 (29%), Positives = 126/242 (52%), Gaps = 9/242 (3%) Query: 286 VLEVRGLNRG----RAIRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGADPLEAGEIII 341 +L++RG+ + A+ D+ T+R GEI G GAG++ + + + G + GEI++ Sbjct: 6 LLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILL 65 Query: 342 HGGNAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSSMGRFTRLGFMDQRAIR 401 G ++ P + A GI + ++ +A + V AN+ + S R TRLG +D A+R Sbjct: 66 DGRPVALRDPGASRAAGINLIYQE---LAVAPNISVAANVFMGSELR-TRLGLIDHAAMR 121 Query: 402 EAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDVGAKS 461 +RQL + + RL S QQ++ IA+ L+ I+ DEPT + Sbjct: 122 SRTDAVLRQLGAGFGASDLAGRL-SIAEQQQVEIARALVHRSRIVIMDEPTAALSERETE 180 Query: 462 EIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGELARADATQEKIMQLAT 521 +++ ++ L ++G AI+ IS + EV ++ RV V+ +G GEL R + E+I+Q+ Sbjct: 181 QLFNVVRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMV 240 Query: 522 QR 523 R Sbjct: 241 GR 242 >gi|300311609|ref|YP_003775701.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 522 Score = 402 bits (1033), Expect = e-113, Method: Compositional matrix adjust. Identities = 228/504 (45%), Positives = 317/504 (62%), Gaps = 15/504 (2%) Query: 24 SSSSSVPVIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQR 83 S S P++ L + KR+ + LD +L G+V AL GENGAGKSTL KI+ G+ Sbjct: 6 SLSQGSPLLTLSGIGKRYAAPV-LDGIDLDLRPGQVLALTGENGAGKSTLSKIICGLVDA 64 Query: 84 DSGDILLDGKPVDITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDE 143 +G ++LDG+P QA+ LGI ++ QELNL+ LS A+N+F+ + PR+ G +ID Sbjct: 65 SAGGMMLDGQPYAPASRTQAEGLGIRMVMQELNLIPTLSIAENLFLEKLPRR-FG-WIDR 122 Query: 144 DELNRQAAAIFARMRL-DMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNN 202 +L A A + L ++DP TPVG+L + QQMVEIA+ L R LI+DEPTA L N Sbjct: 123 KKLAEAARAQMEVVGLGELDPWTPVGDLGLGHQQMVEIARNLIGSCRCLILDEPTAMLTN 182 Query: 203 AEIAELFRIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTII 262 E+ LF I L+A+GV I+YISH+++EL++IADR+ V+RDGK + + S + ++ Sbjct: 183 REVELLFSRIERLRAEGVAIIYISHRLEELKRIADRIVVLRDGKLVCNDDIGRYSTEQLV 242 Query: 263 SMMVGRA----LDGEQRIPPDTSRNDVVLEVRGLNRGRAIRDVSFTLRKGEILGFAGLMG 318 +M G LD E R VL +RGL R + S L GE+LG AGL+G Sbjct: 243 QLMAGELTKVDLDAEHR-----RIGAPVLRIRGLGRAPVVHPASLALHAGEVLGIAGLIG 297 Query: 319 AGRTEVARAIFGADPLEAGEIIIHGGN--AVIKSPADAVAHGIGYLSEDRKHFGLAVGMD 376 +GRTE+ R IFGAD E GEI I A I+SP DAV GI ++EDRK GL + Sbjct: 298 SGRTELLRLIFGADRAEQGEIFIGDSQEPARIRSPKDAVKAGIAMVTEDRKGQGLLLPQA 357 Query: 377 VQANIALSSMGRFTRLGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIA 436 + N +L+++G +R G +D A AQ YV++L I++ SV Q A LSGGNQQK+VIA Sbjct: 358 ISVNTSLANLGSVSRGGMLDHAAESSVAQDYVKKLRIRSGSVAQAAGELSGGNQQKVVIA 417 Query: 437 KWLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLV 496 +WL RDC I+ FDEPTRGID+GAKS+IY+L LA QGK ++++SS+L E++++ R+ V Sbjct: 418 RWLYRDCPIMLFDEPTRGIDIGAKSDIYRLFAELAAQGKGLLVVSSDLRELMQICDRIAV 477 Query: 497 MCEGRITGELARADATQEKIMQLA 520 M GRI +R D +QE+I+ A Sbjct: 478 MSAGRIADTFSRDDWSQERILAAA 501 >gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 506 Score = 399 bits (1024), Expect = e-112, Method: Compositional matrix adjust. Identities = 218/498 (43%), Positives = 312/498 (62%), Gaps = 11/498 (2%) Query: 31 VIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGDILL 90 ++ L + K F V L E+ AGEVHAL+GENGAGKSTLMKIL G+ + D+G+I + Sbjct: 5 MLQLTGIKKNFGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRI 64 Query: 91 DGKPVDITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDEDELNRQA 150 DG+P R A A G+G++ QE +L+ +L A N+F+ RE R G ++ + R+A Sbjct: 65 DGQPCRFDSYRAAIAGGVGVVFQEFSLIPYLDAVDNMFLARELRSRWG-WLQRAAMRRRA 123 Query: 151 AAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFR 210 I ++ + + PV +L+VA+QQ VEIAKAL+ D+R+L++DEPTA L AE+ LF Sbjct: 124 QEIIGQLGVAIPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFA 183 Query: 211 IIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVGRAL 270 ++R L+AQGV I++ISH ++E+ +I DR++V+RDG Y+AT E ++ MMVGR + Sbjct: 184 VMRSLRAQGVAIIFISHHLEEIFEICDRITVLRDGAYVATCATAEVDQARLVEMMVGRRI 243 Query: 271 DGEQRIPPDTSR-----NDVVLEVRGLNRGRAIRDVSFTLRKGEILGFAGLMGAGRTEVA 325 E PP ++ +VVLEV L R F LR+GEILGFAGL+G+GRTE Sbjct: 244 --ENCFPPKPAKGGEGEGEVVLEVHALQLRRQAPVSQFQLRRGEILGFAGLVGSGRTETV 301 Query: 326 RAIFGADPLEAGEIIIHGGNAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSS 385 A+ GA + ++ +HG PA A+ GIG L E RK GL + N++L++ Sbjct: 302 LAMLGAHAALSCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSILHNVSLNN 361 Query: 386 MGRFTRLG--FMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRDC 443 G++ RLG F+D+R ++A + ++++ +K P + + LSGGNQQK+VIA+W+ Sbjct: 362 YGKY-RLGGLFLDRRREQQATEAAMQRVRVKAPGAQVRVDTLSGGNQQKVVIARWINHAM 420 Query: 444 DILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRIT 503 +L FDEPTRGIDVGAKSEIY+L+ QG +I+MISSELPEV+ M+ RV V G I Sbjct: 421 KVLIFDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVFRGGGIV 480 Query: 504 GELARADATQEKIMQLAT 521 L E+IM AT Sbjct: 481 ATLEGEAVNAEEIMTHAT 498 Score = 89.4 bits (220), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 5/226 (2%) Query: 298 IRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGADPLEAGEIIIHGGNAVIKSPADAVAH 357 +R V +R GE+ G GAG++ + + + G +AGEI I G S A+A Sbjct: 21 LRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRIDGQPCRFDSYRAAIAG 80 Query: 358 GIGYLSEDRKHFGLAVGMDVQANIALSSMGRFTRLGFMDQRAIREAAQMYVRQLAIKTPS 417 G+G + ++ F L +D N+ L+ R +R G++ + A+R AQ + QL + P Sbjct: 81 GVGVVFQE---FSLIPYLDAVDNMFLARELR-SRWGWLQRAAMRRRAQEIIGQLGVAIP- 135 Query: 418 VEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAI 477 ++ LS QQ + IAK L D IL DEPT + ++ ++ +L QG AI Sbjct: 136 LDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAVMRSLRAQGVAI 195 Query: 478 VMISSELPEVLRMSHRVLVMCEGRITGELARADATQEKIMQLATQR 523 + IS L E+ + R+ V+ +G A A+ Q +++++ R Sbjct: 196 IFISHHLEEIFEICDRITVLRDGAYVATCATAEVDQARLVEMMVGR 241 >gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 518 Score = 393 bits (1010), Expect = e-110, Method: Compositional matrix adjust. Identities = 225/506 (44%), Positives = 324/506 (64%), Gaps = 17/506 (3%) Query: 31 VIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDS--GDI 88 ++ ++ + K F GV AL+ ++ GE L GENGAGKSTLMKILSGVY + G+I Sbjct: 5 LLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWEGEI 64 Query: 89 LLDGKPVDITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDEDELNR 148 L DGKP+ R +A GI IIHQEL L+ LS A+NIF+G E G ++ + R Sbjct: 65 LWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGG-RMNYPAMYR 123 Query: 149 QAAAIFARMRL-DMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAE 207 +A + + + D++ + PV + QQ+VEIAKAL+ D+R+LI+DEP+++L +EI Sbjct: 124 RAEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASEIGV 183 Query: 208 LFRIIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVG 267 L +II+DL+A+GV VYISHK+DE+ ++ D +SV+RDGK+IAT PMQE +D II+ MVG Sbjct: 184 LLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQMVG 243 Query: 268 RALDGEQRIPPDTSR--NDVVLEVRGLN-------RGRAIRDVSFTLRKGEILGFAGLMG 318 R + + P+ + +VVLE R + R + + DVSF++R+GEILG AGL+G Sbjct: 244 REITA---MYPERNHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVG 300 Query: 319 AGRTEVARAIFGA-DPLEAGEIIIHGGNAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDV 377 AGRTE+ AIFGA G++++ G A SP ++ G+ + EDRKH G+ +DV Sbjct: 301 AGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDV 360 Query: 378 QANIALSSMGRFTRLGFMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAK 437 NI L+ + RF+R +D A + Q + ++ +KT + LSGGNQQK V+AK Sbjct: 361 GQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGNQQKAVLAK 420 Query: 438 WLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVM 497 LL +L DEPTRG+DVGAK+EIY+L+ LA+ G AI+M+SSEL EVL +S RVLV+ Sbjct: 421 MLLAQPKVLILDEPTRGVDVGAKAEIYRLISELAKAGLAIIMVSSELAEVLGVSDRVLVI 480 Query: 498 CEGRITGELARADATQEKIMQLATQR 523 EGR+ G+ + +QE ++ A + Sbjct: 481 GEGRLRGDFVNDNLSQETVLAAAINQ 506 Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/241 (27%), Positives = 121/241 (50%), Gaps = 11/241 (4%) Query: 47 LDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQ-RDSGDILLDGKPVDITEPRQAQA 105 +D+ F + GE+ + G GAG++ L+ + G Y+ R G +LL+GKP D + P ++ Sbjct: 280 VDDVSFSVRRGEILGIAGLVGAGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIR 339 Query: 106 LGIGIIHQELN---LMNHLSAAQNIFIGREPRKAMGLFIDEDELNRQAAAIFARMRLDM- 161 G+ ++ ++ ++ L QNI + R + G ID + RMR+ Sbjct: 340 RGLCMVPEDRKHHGIVPDLDVGQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTA 399 Query: 162 DPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFRIIRDLQAQGVG 221 P P+ L+ QQ +AK L +VLI+DEPT ++ AE++R+I +L G+ Sbjct: 400 TPFLPITSLSGGNQQKAVLAKMLLAQPKVLILDEPTRGVDVGAKAEIYRLISELAKAGLA 459 Query: 222 IVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVGRALDGEQRIPPDTS 281 I+ +S ++ E+ ++DRV V+ +G+ S +T+++ + Q +P T Sbjct: 460 IIMVSSELAEVLGVSDRVLVIGEGRLRGDFVNDNLSQETVLAAAI------NQPVPQATP 513 Query: 282 R 282 R Sbjct: 514 R 514 Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 14/250 (5%) Query: 283 NDVVLEVRGLNRG----RAIRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGADP--LEA 336 ++ +LE++G+ + RA+ + +R GE +G G GAG++ + + + G P Sbjct: 2 SEYLLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSGVYPHGTWE 61 Query: 337 GEIIIHGGNAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSSMGRFTRL--GF 394 GEI+ G S D A GI + ++ L + V NI MG L G Sbjct: 62 GEILWDGKPLQAHSVRDTEAAGIVIIHQE---LMLVPELSVAENIF---MGHEITLPGGR 115 Query: 395 MDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRG 454 M+ A+ A+ +R+L + +V GG+QQ + IAK L +D +L DEP+ Sbjct: 116 MNYPAMYRRAEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSS 175 Query: 455 IDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGELARADATQE 514 + + K++ L +G A V IS +L EV + + V+ +G+ + + Sbjct: 176 LTASEIGVLLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVD 235 Query: 515 KIMQLATQRE 524 KI+ RE Sbjct: 236 KIITQMVGRE 245 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.320 0.135 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,499,179 Number of extensions: 64879 Number of successful extensions: 900 Number of sequences better than 1.0e-08: 128 Number of HSP's gapped: 587 Number of HSP's successfully gapped: 227 Length of query: 529 Length of database: 1,619,870 Length adjustment: 90 Effective length of query: 439 Effective length of database: 1,193,720 Effective search space: 524043080 Effective search space used: 524043080 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)