BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0502.p
         (403 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310389|ref|YP_003774481.1| cyclopropane-fatty-acyl-phospho...   820   0.0  
gi|300310016|ref|YP_003774108.1| cyclopropane-fatty-acyl-phospho...   169   3e-43

>gi|300310389|ref|YP_003774481.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 403

 Score =  820 bits (2118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 403/403 (100%)

Query: 1   VNRSPALQTTGRRAGPISARLFLAMLERLSHGHLELITPHGTTLTFGDLRQPPSAQLRIL 60
           +NRSPALQTTGRRAGPISARLFLAMLERLSHGHLELITPHGTTLTFGDLRQPPSAQLRIL
Sbjct: 1   MNRSPALQTTGRRAGPISARLFLAMLERLSHGHLELITPHGTTLTFGDLRQPPSAQLRIL 60

Query: 61  DWRACGAILRAGDIGFGEAYGHGWVDTPDLAALLRLAMRNRQVLSSAVEGGWLASWWYRL 120
           DWRACGAILRAGDIGFGEAYGHGWVDTPDLAALLRLAMRNRQVLSSAVEGGWLASWWYRL
Sbjct: 61  DWRACGAILRAGDIGFGEAYGHGWVDTPDLAALLRLAMRNRQVLSSAVEGGWLASWWYRL 120

Query: 121 RHLLRSNTRSGSRRNIHAHYDLGNDFYRLWLDPTMSYSSAIFSAPGQSLEQAQAAKYQRI 180
           RHLLRSNTRSGSRRNIHAHYDLGNDFYRLWLDPTMSYSSAIFSAPGQSLEQAQAAKYQRI
Sbjct: 121 RHLLRSNTRSGSRRNIHAHYDLGNDFYRLWLDPTMSYSSAIFSAPGQSLEQAQAAKYQRI 180

Query: 181 IDQLGLRAGDRVLEIGCGWGGFAEHAARLGIRVHGVTISPAQLAYAQERMRTQQLDHLAH 240
           +DQLGLRAGDRVLEIGCGWGGFAEHAARLGIRVHGVTISPAQLAYAQERMRTQQLDHLAH
Sbjct: 181 VDQLGLRAGDRVLEIGCGWGGFAEHAARLGIRVHGVTISPAQLAYAQERMRTQQLDHLAH 240

Query: 241 LELCDYRDLDGQYDAIVSIEMFEAVGERFWQTYFDTVCARLKAGGQALIQSITIEEAVFE 300
           LELCDYRDLDGQYDAIVSIEMFEAVGERFWQTYFDTVCARLKAGGQALIQSITIEEAVFE
Sbjct: 241 LELCDYRDLDGQYDAIVSIEMFEAVGERFWQTYFDTVCARLKAGGQALIQSITIEEAVFE 300

Query: 301 RYRDSADFIREFIFPGGMLPSHERFSRCAQRAGLATRERFHFGRDYAETLRRWHDSFLAQ 360
           RYRDSADFIREFIFPGGMLPSHERFSRCAQRAGLATRERFHFGRDYAETLRRWHDSFLAQ
Sbjct: 301 RYRDSADFIREFIFPGGMLPSHERFSRCAQRAGLATRERFHFGRDYAETLRRWHDSFLAQ 360

Query: 361 RETIAAQGFDERFRRLWQLYYVFCEVGFDEGQTDVVQFLLHKE 403
           RETIAAQGFDERFRRLWQLYYVFCEVGFDEGQTDVVQFLLHKE
Sbjct: 361 RETIAAQGFDERFRRLWQLYYVFCEVGFDEGQTDVVQFLLHKE 403


>gi|300310016|ref|YP_003774108.1|
           cyclopropane-fatty-acyl-phospholipid synthase
           [Herbaspirillum seropedicae SmR1]
          Length = 407

 Score =  169 bits (429), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 174/375 (46%), Gaps = 19/375 (5%)

Query: 34  LELITPHGTTLTFGDLRQPPSAQLRILDWRACGAILRAGDIGFGEAYGHGWVDTPDLAAL 93
           L L+  +G    FG     P   L++    A  ++L       GEAY  G ++       
Sbjct: 28  LRLVLWNGQQYDFGS--GTPEVTLKVPHASAITSLLTPSLANLGEAYVEGKIEVEGKVKS 85

Query: 94  LRLAMRNRQVLSSAVEGGWLASWWYRLRHLLRSNTRSGSR--RNIHAHYDLGNDFYRLWL 151
           +     +    +   EG        RL  ++RS T +  R    I  HYD+ NDFY+L+L
Sbjct: 86  IIQVANSLASNTLKAEG--------RLGRMVRSVTHTRKRDAEAIQYHYDVSNDFYKLFL 137

Query: 152 DPTMSYSSAIFSAPGQSLEQAQAAKYQRIIDQLGLRAGDRVLEIGCGWGGFAEHAA-RLG 210
           D  M YS A F    + L  AQ  K   I++++ LR G  +L+IGCGWG     AA + G
Sbjct: 138 DEHMVYSCAYFENGDEDLATAQIKKIDHILEKIQLRPGQTLLDIGCGWGALVLRAAQKYG 197

Query: 211 IRVHGVTISPAQLAYAQERMRTQQLDHLAHLELCDYRDLDGQYDAIVSIEMFEAVGERFW 270
            R  GVT+S  Q A A+ER+    L     + L DYRD+ G +D I S+ MFE VG +  
Sbjct: 198 ARCVGVTLSRNQYALARERVEAAGLSDRIEIRLQDYRDVTGSFDRITSVGMFEHVGIKNL 257

Query: 271 QTYFDTVCARLKAGGQAL---IQSITIEEAVFERYRDSADFIREFIFPGGMLPSHERFSR 327
            +YF  +   L  GG A+   I S  IE    E    + +FI +++FP G LP      +
Sbjct: 258 PSYFAQIRKLLADGGMAMNHGITSTDIENG--ESPYGAGEFIDKYVFPAGELPHISTVLK 315

Query: 328 CAQRAGLATRERFHFGRDYAETLRRWHDSFLAQRETIAAQGFDERFRRLWQLYYVFCEVG 387
             Q  GL   +  +  R YA T   W D+F A  E I  +  DE+  R+W++Y      G
Sbjct: 316 TMQEGGLEAFDVENLRRHYARTCGIWADNFEANTEAI-HRVTDEKHYRIWRVYLAGSAYG 374

Query: 388 FDEGQTDVVQFLLHK 402
           F+     + Q +  K
Sbjct: 375 FERDWISLYQVVCTK 389


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.326    0.139    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 1,360,893
Number of extensions: 58220
Number of successful extensions: 251
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 248
Number of HSP's successfully gapped: 2
Length of query: 403
Length of database: 1,619,870
Length adjustment: 87
Effective length of query: 316
Effective length of database: 1,207,925
Effective search space: 381704300
Effective search space used: 381704300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 132 (55.5 bits)