BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0495.p (500 letters) Database: BlastDatabases/689/689 4735 sequences; 1,619,870 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [H... 1001 0.0 gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [H... 412 e-116 gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [H... 396 e-111 gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase... 362 e-101 gi|300313728|ref|YP_003777820.1| sugar ABC transporter ATPase [H... 340 1e-94 >gi|300310396|ref|YP_003774488.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 506 Score = 1001 bits (2589), Expect = 0.0, Method: Compositional matrix adjust. Identities = 497/502 (99%), Positives = 498/502 (99%), Gaps = 2/502 (0%) Query: 1 MLQLTGIKKNFGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRI 60 MLQLTGIKKNFGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRI Sbjct: 5 MLQLTGIKKNFGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRI 64 Query: 61 DGQPCRFDSYRAAIAGGVGVVFQEFSLIPYLDAVDNMFLARELRSRWGWLQRAAMRRRAQ 120 DGQPCRFDSYRAAIAGGVGVVFQEFSLIPYLDAVDNMFLARELRSRWGWLQRAAMRRRAQ Sbjct: 65 DGQPCRFDSYRAAIAGGVGVVFQEFSLIPYLDAVDNMFLARELRSRWGWLQRAAMRRRAQ 124 Query: 121 EIIAQLGVAIPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAV 180 EII QLGVAIPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAV Sbjct: 125 EIIGQLGVAIPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAV 184 Query: 181 MRSLRAQGVAIIFISHHLEEIFEICDSITVLRDGAYVATCATAEVDQARLVEMMVGRRIE 240 MRSLRAQGVAIIFISHHLEEIFEICD ITVLRDGAYVATCATAEVDQARLVEMMVGRRIE Sbjct: 185 MRSLRAQGVAIIFISHHLEEIFEICDRITVLRDGAYVATCATAEVDQARLVEMMVGRRIE 244 Query: 241 NCFPPKPAKG--GEGEVVLEVHALQLRRQAPVSQFQLRRGEILGFAGLVGSGRTETVLAM 298 NCFPPKPAKG GEGEVVLEVHALQLRRQAPVSQFQLRRGEILGFAGLVGSGRTETVLAM Sbjct: 245 NCFPPKPAKGGEGEGEVVLEVHALQLRRQAPVSQFQLRRGEILGFAGLVGSGRTETVLAM 304 Query: 299 LGAHAALSCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSILHNVSLNNYGK 358 LGAHAALSCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSILHNVSLNNYGK Sbjct: 305 LGAHAALSCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSILHNVSLNNYGK 364 Query: 359 YRLGGLFLDRRREQQATEAAMQRVRVKAPGARVRVDTLSGGNQQKVVIARWINHAMKVLI 418 YRLGGLFLDRRREQQATEAAMQRVRVKAPGA+VRVDTLSGGNQQKVVIARWINHAMKVLI Sbjct: 365 YRLGGLFLDRRREQQATEAAMQRVRVKAPGAQVRVDTLSGGNQQKVVIARWINHAMKVLI 424 Query: 419 FDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVFRGGGIVATLE 478 FDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVFRGGGIVATLE Sbjct: 425 FDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVFRGGGIVATLE 484 Query: 479 GEAVNAEEIMTHATTGRIRHAA 500 GEAVNAEEIMTHATTGRIRHAA Sbjct: 485 GEAVNAEEIMTHATTGRIRHAA 506 >gi|300310063|ref|YP_003774155.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 521 Score = 412 bits (1059), Expect = e-116, Method: Compositional matrix adjust. Identities = 222/504 (44%), Positives = 312/504 (61%), Gaps = 7/504 (1%) Query: 1 MLQLTGIKKNFGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRI 60 +LQ+ GI+K+FG L + L +R GE+HAL+GENGAGKSTLMK+L G+ PD GEI + Sbjct: 6 LLQMRGIRKSFGATLALSDMHLTIRPGEIHALMGENGAGKSTLMKVLSGVHAPDQGEILL 65 Query: 61 DGQPCRFDSYRAAIAGGVGVVFQEFSLIPYLDAVDNMFLARELRSRWGWLQRAAMRRRAQ 120 DG+P A+ A G+ +++QE ++ P + N+F+ ELR+R G + AAMR R Sbjct: 66 DGRPVALRDPGASRAAGINLIYQELAVAPNISVAANVFMGSELRTRLGLIDHAAMRSRTD 125 Query: 121 EIIAQLGVAIPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAV 180 ++ QLG +LS+A+QQ VEIA+AL +RI+++DEPTA L+ E E LF V Sbjct: 126 AVLRQLGAGFGASDLAGRLSIAEQQQVEIARALVHRSRIVIMDEPTAALSERETEQLFNV 185 Query: 181 MRSLRAQGVAIIFISHHLEEIFEICDSITVLRDGAYVATCATAEVDQARLVEMMVGRRIE 240 +R LR +G+AII+ISH + E++ + D +TVLRDG++V E+D R+V+MMVGR + Sbjct: 186 VRRLRDEGLAIIYISHRMAEVYALADRVTVLRDGSFVGELVRDEIDSERIVQMMVGRSLS 245 Query: 241 NCFPPK---PAKGGEGEVVLEVHALQLRRQAPVSQFQLRRGEILGFAGLVGSGRTETVLA 297 + + PA + V++V AL + P S F +R GE+LGFAGLVG+GRTE Sbjct: 246 EFYQHQRIAPADAAQLPTVMQVRALAGGKIRPAS-FDVRAGEVLGFAGLVGAGRTELARL 304 Query: 298 MLGAHAALSCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSILHNVSLNNYG 357 + GA + + G P+ P A++AGI +PE RK QGL ++ N ++N Sbjct: 305 LFGADPRSGGDILLEGRPVHIDQPRAAMRAGIAYVPEDRKGQGLFLQMAVAANATMNVAS 364 Query: 358 KY-RLGGLFLDRRREQQATEAAMQRVRVKAPGARVRVDTLSGGNQQKVVIARWINHAMKV 416 ++ RLG + R AA+QR+ VK V LSGGNQQKV++ARW+ A KV Sbjct: 365 RHTRLG--LVRSRSLGGVARAAIQRLNVKVAHPETPVGKLSGGNQQKVLLARWLEIAPKV 422 Query: 417 LIFDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVFRGGGIVAT 476 LI DEPTRG+D+ AKSEIYQL+ +QG ++++ISSELPEV+G+ DRV V R G I Sbjct: 423 LILDEPTRGVDIYAKSEIYQLVHRLASQGVAVVVISSELPEVIGICDRVLVMREGMITGE 482 Query: 477 LEGEAVNAEEIMTHATTGRIRHAA 500 L G A+ E IM AT + A Sbjct: 483 LAGAAITQENIMRLATDTNVPRTA 506 Score = 99.0 bits (245), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 119/240 (49%), Gaps = 19/240 (7%) Query: 17 LRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRIDGQPCRFDSYRAAIAG 76 +R +VRAGEV G GAG++ L ++L G G+I ++G+P D RAA+ Sbjct: 275 IRPASFDVRAGEVLGFAGLVGAGRTELARLLFGADPRSGGDILLEGRPVHIDQPRAAMRA 334 Query: 77 GVGVVFQE-----FSLIPYLDAVDNMFLARE------LRSR-WGWLQRAAMRRRAQEIIA 124 G+ V ++ L + A M +A +RSR G + RAA++R Sbjct: 335 GIAYVPEDRKGQGLFLQMAVAANATMNVASRHTRLGLVRSRSLGGVARAAIQR------L 388 Query: 125 QLGVAIPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAVMRSL 184 + VA P + PV KLS QQ V +A+ L + ++L+LDEPT + ++ ++ L Sbjct: 389 NVKVAHP-ETPVGKLSGGNQQKVLLARWLEIAPKVLILDEPTRGVDIYAKSEIYQLVHRL 447 Query: 185 RAQGVAIIFISHHLEEIFEICDSITVLRDGAYVATCATAEVDQARLVEMMVGRRIENCFP 244 +QGVA++ IS L E+ ICD + V+R+G A A + Q ++ + + P Sbjct: 448 ASQGVAVVVISSELPEVIGICDRVLVMREGMITGELAGAAITQENIMRLATDTNVPRTAP 507 >gi|300310382|ref|YP_003774474.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 520 Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust. Identities = 217/496 (43%), Positives = 311/496 (62%), Gaps = 9/496 (1%) Query: 1 MLQLTGIKKNFGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRI 60 ++ L + K F V L E+ AGEVHAL+GENGAGKSTLMKIL G+ + D+G+I + Sbjct: 22 VIALRNVCKRFPGVLALDNCQFELAAGEVHALMGENGAGKSTLMKILSGVYQRDSGDILL 81 Query: 61 DGQPCRFDSYRAAIAGGVGVVFQEFSLIPYLDAVDNMFLARELRSRWG-WLQRAAMRRRA 119 DG+P R A A G+G++ QE +L+ +L A N+F+ RE R G ++ + R+A Sbjct: 82 DGKPVEITEPRQAQALGIGIIHQELNLMNHLSAAQNIFIGREPRKAMGLFIDEDELNRQA 141 Query: 120 QEIIAQLGVAIPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFA 179 I A++ + + PV +L+VA+QQ VEIAKAL+ D+R+L++DEPTA L AE+ LF Sbjct: 142 AAIFARMRLDMDPSTPVGELTVARQQMVEIAKALSFDSRVLIMDEPTAALNNAEIAELFR 201 Query: 180 VMRSLRAQGVAIIFISHHLEEIFEICDSITVLRDGAYVATCATAEVDQARLVEMMVGRRI 239 ++R L+AQGV I++ISH ++E+ +I D ++V+RDG Y+AT E ++ MMVGR + Sbjct: 202 IIRDLQAQGVGIVYISHKMDELRQIADRVSVMRDGKYIATVPMQETSMDTIISMMVGRAL 261 Query: 240 --ENCFPPKPAKGGEGEVVLEVHALQLRRQAPVSQFQLRRGEILGFAGLVGSGRTETVLA 297 E PP ++ +VVLEV L R F LR+GEILGFAGL+G+GRTE A Sbjct: 262 DGEQRIPPDTSR---NDVVLEVRGLNRGRAIRDVSFTLRKGEILGFAGLMGAGRTEVARA 318 Query: 298 MLGAHAALSCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSILHNVSLNNYG 357 + GA + ++ +HG PA A+ GIG L E RK GL + N++L++ G Sbjct: 319 IFGADPLEAGEIIIHGGKAVIKSPADAVAHGIGYLSEDRKHFGLAVGMDVQANIALSSMG 378 Query: 358 KY-RLGGLFLDRRREQQATEAAMQRVRVKAPGARVRVDTLSGGNQQKVVIARWINHAMKV 416 ++ R+G F+D+R ++A + ++++ +K P + LSGGNQQK+VIA+W+ + Sbjct: 379 RFTRVG--FMDQRAIREAAQMYVRQLAIKTPSVEQQARLLSGGNQQKIVIAKWLLRDCDI 436 Query: 417 LIFDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVFRGGGIVAT 476 L FDEPTRGIDVGAKSEIY+L+ QG +I+MISSELPEV+ M+ RV V G I Sbjct: 437 LFFDEPTRGIDVGAKSEIYKLLDALAEQGKAIVMISSELPEVLRMSHRVLVMCEGRITGE 496 Query: 477 LEGEAVNAEEIMTHAT 492 L E+IM AT Sbjct: 497 LARADATQEKIMQLAT 512 Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 5/226 (2%) Query: 17 LRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRIDGQPCRFDSYRAAIAG 76 +R V +R GE+ G GAG++ + + + G +AGEI I G S A+A Sbjct: 289 IRDVSFTLRKGEILGFAGLMGAGRTEVARAIFGADPLEAGEIIIHGGKAVIKSPADAVAH 348 Query: 77 GVGVVFQE---FSLIPYLDAVDNMFLARELR-SRWGWLQRAAMRRRAQEIIAQLGVAIP- 131 G+G + ++ F L +D N+ L+ R +R G++ + A+R AQ + QL + P Sbjct: 349 GIGYLSEDRKHFGLAVGMDVQANIALSSMGRFTRVGFMDQRAIREAAQMYVRQLAIKTPS 408 Query: 132 LDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAVMRSLRAQGVAI 191 ++ LS QQ + IAK L D IL DEPT + ++ ++ +L QG AI Sbjct: 409 VEQQARLLSGGNQQKIVIAKWLLRDCDILFFDEPTRGIDVGAKSEIYKLLDALAEQGKAI 468 Query: 192 IFISHHLEEIFEICDSITVLRDGAYVATCATAEVDQARLVEMMVGR 237 + IS L E+ + + V+ +G A A+ Q +++++ R Sbjct: 469 VMISSELPEVLRMSHRVLVMCEGRITGELARADATQEKIMQLATQR 514 >gi|300313777|ref|YP_003777869.1| D-xylose ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 518 Score = 362 bits (930), Expect = e-101, Method: Compositional matrix adjust. Identities = 203/512 (39%), Positives = 311/512 (60%), Gaps = 16/512 (3%) Query: 1 MLQLTGIKKNFGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDA---GE 57 +L++ GI K+FG V L G+D+++R GE L GENGAGKSTLMKIL G V P GE Sbjct: 5 LLEMKGIVKSFGGVRALNGIDIKIRPGECVGLCGENGAGKSTLMKILSG-VYPHGTWEGE 63 Query: 58 IRIDGQPCRFDSYRAAIAGGVGVVFQEFSLIPYLDAVDNMFLARELRSRWGWLQRAAMRR 117 I DG+P + S R A G+ ++ QE L+P L +N+F+ E+ G + AM R Sbjct: 64 ILWDGKPLQAHSVRDTEAAGIVIIHQELMLVPELSVAENIFMGHEITLPGGRMNYPAMYR 123 Query: 118 RAQEIIAQLGVA-IPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEH 176 RA+E++ +L + I + +PV + QQ VEIAKAL DAR+L+LDEP+++LT +E+ Sbjct: 124 RAEELMRELNMPDINVALPVSQYGGGHQQLVEIAKALNKDARLLILDEPSSSLTASEIGV 183 Query: 177 LFAVMRSLRAQGVAIIFISHHLEEIFEICDSITVLRDGAYVATCATAEVDQARLVEMMVG 236 L +++ L+A+GVA ++ISH L+E+ E+CD+I+V+RDG ++AT E+D +++ MVG Sbjct: 184 LLKIIKDLKARGVACVYISHKLDEVAEVCDTISVIRDGKHIATTPMQEMDVDKIITQMVG 243 Query: 237 RRIENCFPPKPAKGGEGEVVLEVHALQL-------RRQAPVSQFQLRRGEILGFAGLVGS 289 R I +P + GEVVLE + R++ F +RRGEILG AGLVG+ Sbjct: 244 REITAMYPER--NHAIGEVVLEARNITCYDIDNPRRKRVDDVSFSVRRGEILGIAGLVGA 301 Query: 290 GRTETVLAMLGAH-AALSCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSIL 348 GRTE V A+ GA+ ++ + G P + P ++++ G+ ++PE RK G++ + Sbjct: 302 GRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGLCMVPEDRKHHGIVPDLDVG 361 Query: 349 HNVSLNNYGKYRLGGLFLDRRREQQATEAAMQRVRVKAPGARVRVDTLSGGNQQKVVIAR 408 N++L ++ G +D E + + + R+RVK + + +LSGGNQQK V+A+ Sbjct: 362 QNITLTVLNRFSRGS-RIDGSAELKTIQDEIGRMRVKTATPFLPITSLSGGNQQKAVLAK 420 Query: 409 WINHAMKVLIFDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVF 468 + KVLI DEPTRG+DVGAK+EIY+L+ E G +I+M+SSEL EV+G++DRV V Sbjct: 421 MLLAQPKVLILDEPTRGVDVGAKAEIYRLISELAKAGLAIIMVSSELAEVLGVSDRVLVI 480 Query: 469 RGGGIVATLEGEAVNAEEIMTHATTGRIRHAA 500 G + + ++ E ++ A + A Sbjct: 481 GEGRLRGDFVNDNLSQETVLAAAINQPVPQAT 512 Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 8/232 (3%) Query: 20 VDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPD-AGEIRIDGQPCRFDSYRAAIAGGV 78 V VR GE+ + G GAG++ L+ + G R G++ ++G+P S +I G+ Sbjct: 283 VSFSVRRGEILGIAGLVGAGRTELVSAIFGAYRGRYEGQVLLEGKPADTSSPLKSIRRGL 342 Query: 79 GVVFQE---FSLIPYLDAVDNMFLARELR-SRWGWLQRAAMRRRAQEIIAQLGV--AIPL 132 +V ++ ++P LD N+ L R SR + +A + Q+ I ++ V A P Sbjct: 343 CMVPEDRKHHGIVPDLDVGQNITLTVLNRFSRGSRIDGSAELKTIQDEIGRMRVKTATPF 402 Query: 133 DVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEHLFAVMRSLRAQGVAII 192 +P+ LS QQ +AK L ++L+LDEPT + ++ ++ L G+AII Sbjct: 403 -LPITSLSGGNQQKAVLAKMLLAQPKVLILDEPTRGVDVGAKAEIYRLISELAKAGLAII 461 Query: 193 FISHHLEEIFEICDSITVLRDGAYVATCATAEVDQARLVEMMVGRRIENCFP 244 +S L E+ + D + V+ +G + Q ++ + + + P Sbjct: 462 MVSSELAEVLGVSDRVLVIGEGRLRGDFVNDNLSQETVLAAAINQPVPQATP 513 >gi|300313728|ref|YP_003777820.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] Length = 546 Score = 340 bits (873), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 196/479 (40%), Positives = 287/479 (59%), Gaps = 15/479 (3%) Query: 1 MLQLTGIKKNFGPVTVLRGVDLEVRAGEVHALLGENGAGKSTLMKILCGIVRPDAGEIRI 60 +L L+GI K F V L+ V VR GEV ALLGENGAGKSTL+KIL GI +PD G I + Sbjct: 35 VLSLSGIGKRFQGVVALQDVGFTVRPGEVMALLGENGAGKSTLVKILTGIHQPDEGSIHL 94 Query: 61 DGQPCRFDSYRAAIAGGVGVVFQEFSLIPYLDAVDNMFLARE----LRSRWGWLQRAAMR 116 G+ RF S + A+ GG+ V QE + L +N+++ R+ R W + M Sbjct: 95 GGREVRFASAQDAMRGGITAVHQETVMFEELSVAENIWIGRQPLCGTPRRIDWRR---ME 151 Query: 117 RRAQEIIAQLGVAIPLDVPVCKLSVAQQQFVEIAKALALDARILVLDEPTATLTPAEVEH 176 A+ + A+L V +P+ V LSVAQ+ FVEIA+AL+ A+++++DEPTA L+ E+ Sbjct: 152 DEARALFARLEVDLPVRARVKDLSVAQRHFVEIARALSQQAQVVIMDEPTAALSHHEIGE 211 Query: 177 LFAVMRSLRAQGVAIIFISHHLEEIFEICDSITVLRDGAYVATCATAEVDQARLVEMMVG 236 L+ ++ LR G A+IFISH +EI+ + D TVLRDG ++A+ A++ + +LV +MVG Sbjct: 212 LYRIIGQLRRAGTAVIFISHKFDEIYAVADRYTVLRDGRFIASGELADITEQQLVALMVG 271 Query: 237 RRIENCFPPKPAKGGEGEV--VLEVHALQLRRQAPVSQFQLRRGEILGFAGLVGSGRTET 294 R + F + A E + VLEV L + F +R GEILGF GLVG+GR+E Sbjct: 272 REVGQVF-SRAASNTEDQTAPVLEVKHLSHPSEFDDVSFAVRPGEILGFYGLVGAGRSEV 330 Query: 295 VLAMLGAHAALSCKLSMHGVPLRFADPAQALQAGIGLLPESRKEQGLITSFSILHNVSLN 354 + A+ G + + G ++ PAQA+ G+ +PE R+ QG + S I N++L Sbjct: 331 MHALFGLSPEAQGAVWIDGREVKLCSPAQAIAHGLAYVPEDRQRQGALLSLPIFQNITLP 390 Query: 355 NYGKYRLGGLFL--DRRREQQATEAAMQRVRVKAPGARVRVDTLSGGNQQKVVIARWINH 412 G FL RRRE +++ +KA V LSGGNQQKVV+A+W+ Sbjct: 391 VLPGI---GFFLRRHRRREIDIARRLCEQLELKASHFHQHVAQLSGGNQQKVVLAKWLAT 447 Query: 413 AMKVLIFDEPTRGIDVGAKSEIYQLMREFTAQGYSILMISSELPEVVGMADRVCVFRGG 471 +VLI DEPT+GID+G+K+ +++ + E AQG +++++SSELPEV+GM+DR+ V G Sbjct: 448 QPRVLILDEPTKGIDIGSKAAVHRFIGELVAQGLAVILVSSELPEVMGMSDRIVVMHQG 506 Database: BlastDatabases/689/689 Posted date: Apr 10, 2011 12:15 AM Number of letters in database: 1,619,870 Number of sequences in database: 4735 Lambda K H 0.323 0.138 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4735 Number of Hits to DB: 1,584,465 Number of extensions: 68374 Number of successful extensions: 884 Number of sequences better than 1.0e-08: 128 Number of HSP's gapped: 580 Number of HSP's successfully gapped: 188 Length of query: 500 Length of database: 1,619,870 Length adjustment: 89 Effective length of query: 411 Effective length of database: 1,198,455 Effective search space: 492565005 Effective search space used: 492565005 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 132 (55.5 bits)