BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0425.p
         (300 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310457|ref|YP_003774549.1| GNAT family acetyltransferase [...   607   e-175
gi|300310461|ref|YP_003774553.1| histone acetyltransferase HPA2 ...   251   6e-68

>gi|300310457|ref|YP_003774549.1| GNAT family acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 300

 Score =  607 bits (1564), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 299/300 (99%), Positives = 299/300 (99%)

Query: 1   MPAPSTHDPQTVRAPLPDLLLRPMEADDLAHCHRLSLRFKWPHRLEDWNFLLQRGQGYLL 60
           MPAPSTHDPQTVRAPLPDLLLRPMEADDLAHCHRLSLRFKWPHRLEDWNFLLQRGQGYLL
Sbjct: 1   MPAPSTHDPQTVRAPLPDLLLRPMEADDLAHCHRLSLRFKWPHRLEDWNFLLQRGQGYLL 60

Query: 61  ENTDAEAPLRVVGSVVCTPYGAHHAVIGMLLVQAELQRRGLGRRLMQQAASAVQGHSLIV 120
           ENTDAEAPLRVVGSVVCTPYGAHHAVIGMLLVQAELQRRGLGRRLMQQAASAVQGHSLIV
Sbjct: 61  ENTDAEAPLRVVGSVVCTPYGAHHAVIGMLLVQAELQRRGLGRRLMQQAASAVQGHSLIV 120

Query: 121 NATAAGMPLYKQLGFVQQDVLHQFQGSSAQPVLVSLPPGERVRPMGKNDVQRLLALDAQA 180
           NATAAGMPLYKQLGFVQQDVLHQFQGSSAQPVLVSLPPGERVRPMGKNDV RLLALDAQA
Sbjct: 121 NATAAGMPLYKQLGFVQQDVLHQFQGSSAQPVLVSLPPGERVRPMGKNDVPRLLALDAQA 180

Query: 181 TGMDRSKLLLALLDMSEAVALDRDGEMLGFALVRRFGHGRVIGPVVAPDAERAKGLIAHW 240
           TGMDRSKLLLALLDMSEAVALDRDGEMLGFALVRRFGHGRVIGPVVAPDAERAKGLIAHW
Sbjct: 181 TGMDRSKLLLALLDMSEAVALDRDGEMLGFALVRRFGHGRVIGPVVAPDAERAKGLIAHW 240

Query: 241 INTYSDSFIRLDVFESTGLPSWLDKLGLTCVDHVTRMCKGEPPVRDPGMQLFSIVNQALG 300
           INTYSDSFIRLDVFESTGLPSWLDKLGLTCVDHVTRMCKGEPPVRDPGMQLFSIVNQALG
Sbjct: 241 INTYSDSFIRLDVFESTGLPSWLDKLGLTCVDHVTRMCKGEPPVRDPGMQLFSIVNQALG 300


>gi|300310461|ref|YP_003774553.1| histone acetyltransferase HPA2
           protein [Herbaspirillum seropedicae SmR1]
          Length = 295

 Score =  251 bits (641), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 128/282 (45%), Positives = 177/282 (62%), Gaps = 5/282 (1%)

Query: 21  LRPMEADDLAHCHRLSLRFKWPHRLEDWNFLLQRGQGYLLENTDAEAPLRVVGSVVCTPY 80
           LRPM  +DLA CH +SL   WPHRL DW F  Q    + +E    +    V GS +  P 
Sbjct: 17  LRPMRPEDLASCHAMSLHLHWPHRLADWQFHHQVSSSWAVELEQPDGARSVAGSGMLCPL 76

Query: 81  GAHHAVIGMLLVQAELQRRGLGRRLMQQAASAVQGHSLIVNATAAGMPLYKQLGFVQQDV 140
           G  +A +G++++   LQ RGLGR +MQ+        ++I+NAT AG PLY++LGF   D 
Sbjct: 77  GEDYASLGLVIIADALQGRGLGRAMMQRLLQDAGSRNVILNATDAGRPLYEKLGFAVTDT 136

Query: 141 LHQFQGSSA--QPVLVSLPPGERVRPMGKNDVQRLLALDAQATGMDRSKLLLALLDMSEA 198
           L Q Q ++A  QPVL +     R+RP+ K +    LALD QA+GMDRS LL  LL  +E 
Sbjct: 137 LSQHQSTTARAQPVLAA---DARIRPLRKEEAPAFLALDRQASGMDRSTLLQPLLATAEV 193

Query: 199 VALDRDGEMLGFALVRRFGHGRVIGPVVAPDAERAKGLIAHWINTYSDSFIRLDVFESTG 258
             L++ G++ G A++R FG GRVIGPV+A   E AK LIAHW++ Y  +++R+DV   TG
Sbjct: 194 AVLEQAGQVKGVAMLREFGRGRVIGPVIASQVEDAKALIAHWVHAYPGAYLRIDVPGRTG 253

Query: 259 LPSWLDKLGLTCVDHVTRMCKGEPPVRDPGMQLFSIVNQALG 300
           L  WL+++GLTCVD+V  MC+G PP      + +S++NQALG
Sbjct: 254 LKPWLEEIGLTCVDNVVSMCRGTPPSPATPWRTYSMINQALG 295


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.323    0.138    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 973,765
Number of extensions: 41005
Number of successful extensions: 125
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 124
Number of HSP's successfully gapped: 2
Length of query: 300
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 215
Effective length of database: 1,217,395
Effective search space: 261739925
Effective search space used: 261739925
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 130 (54.7 bits)