BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0420.p
         (295 letters)

Database: BlastDatabases/689/689 
           4735 sequences; 1,619,870 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|300310461|ref|YP_003774553.1| histone acetyltransferase HPA2 ...   600   e-173
gi|300310457|ref|YP_003774549.1| GNAT family acetyltransferase [...   254   6e-69

>gi|300310461|ref|YP_003774553.1| histone acetyltransferase HPA2
           protein [Herbaspirillum seropedicae SmR1]
          Length = 295

 Score =  600 bits (1547), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 295/295 (100%), Positives = 295/295 (100%)

Query: 1   MHTDSTLTAGQAAQTTLRPMRPEDLASCHAMSLHLHWPHRLADWQFHHQVSSSWAVELEQ 60
           MHTDSTLTAGQAAQTTLRPMRPEDLASCHAMSLHLHWPHRLADWQFHHQVSSSWAVELEQ
Sbjct: 1   MHTDSTLTAGQAAQTTLRPMRPEDLASCHAMSLHLHWPHRLADWQFHHQVSSSWAVELEQ 60

Query: 61  PDGARSVAGSGMLCPLGEDYASLGLVIIADALQGRGLGRAMMQRLLQDAGSRNVILNATD 120
           PDGARSVAGSGMLCPLGEDYASLGLVIIADALQGRGLGRAMMQRLLQDAGSRNVILNATD
Sbjct: 61  PDGARSVAGSGMLCPLGEDYASLGLVIIADALQGRGLGRAMMQRLLQDAGSRNVILNATD 120

Query: 121 AGRPLYEKLGFAVTDTLSQHQSTTARAQPVLAADARIRPLRKEEAPAFLALDRQASGMDR 180
           AGRPLYEKLGFAVTDTLSQHQSTTARAQPVLAADARIRPLRKEEAPAFLALDRQASGMDR
Sbjct: 121 AGRPLYEKLGFAVTDTLSQHQSTTARAQPVLAADARIRPLRKEEAPAFLALDRQASGMDR 180

Query: 181 STLLQPLLATAEVAVLEQAGQVKGVAMLREFGRGRVIGPVIASQVEDAKALIAHWVHAYP 240
           STLLQPLLATAEVAVLEQAGQVKGVAMLREFGRGRVIGPVIASQVEDAKALIAHWVHAYP
Sbjct: 181 STLLQPLLATAEVAVLEQAGQVKGVAMLREFGRGRVIGPVIASQVEDAKALIAHWVHAYP 240

Query: 241 GAYLRIDVPGRTGLKPWLEEIGLTCVDNVVSMCRGTPPSPATPWRTYSMINQALG 295
           GAYLRIDVPGRTGLKPWLEEIGLTCVDNVVSMCRGTPPSPATPWRTYSMINQALG
Sbjct: 241 GAYLRIDVPGRTGLKPWLEEIGLTCVDNVVSMCRGTPPSPATPWRTYSMINQALG 295


>gi|300310457|ref|YP_003774549.1| GNAT family acetyltransferase
           [Herbaspirillum seropedicae SmR1]
          Length = 300

 Score =  254 bits (649), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 129/282 (45%), Positives = 178/282 (63%), Gaps = 5/282 (1%)

Query: 17  LRPMRPEDLASCHAMSLHLHWPHRLADWQFHHQVSSSWAVELEQPDGARSVAGSGMLCPL 76
           LRPM  +DLA CH +SL   WPHRL DW F  Q    + +E    +    V GS +  P 
Sbjct: 21  LRPMEADDLAHCHRLSLRFKWPHRLEDWNFLLQRGQGYLLENTDAEAPLRVVGSVVCTPY 80

Query: 77  GEDYASLGLVIIADALQGRGLGRAMMQRLLQDAGSRNVILNATDAGRPLYEKLGFAVTDT 136
           G  +A +G++++   LQ RGLGR +MQ+        ++I+NAT AG PLY++LGF   D 
Sbjct: 81  GAHHAVIGMLLVQAELQRRGLGRRLMQQAASAVQGHSLIVNATAAGMPLYKQLGFVQQDV 140

Query: 137 LSQHQSTTARAQPVLAA---DARIRPLRKEEAPAFLALDRQASGMDRSTLLQPLLATAEV 193
           L Q Q ++A  QPVL +     R+RP+ K + P  LALD QA+GMDRS LL  LL  +E 
Sbjct: 141 LHQFQGSSA--QPVLVSLPPGERVRPMGKNDVPRLLALDAQATGMDRSKLLLALLDMSEA 198

Query: 194 AVLEQAGQVKGVAMLREFGRGRVIGPVIASQVEDAKALIAHWVHAYPGAYLRIDVPGRTG 253
             L++ G++ G A++R FG GRVIGPV+A   E AK LIAHW++ Y  +++R+DV   TG
Sbjct: 199 VALDRDGEMLGFALVRRFGHGRVIGPVVAPDAERAKGLIAHWINTYSDSFIRLDVFESTG 258

Query: 254 LKPWLEEIGLTCVDNVVSMCRGTPPSPATPWRTYSMINQALG 295
           L  WL+++GLTCVD+V  MC+G PP      + +S++NQALG
Sbjct: 259 LPSWLDKLGLTCVDHVTRMCKGEPPVRDPGMQLFSIVNQALG 300


  Database: BlastDatabases/689/689
    Posted date:  Apr 10, 2011 12:15 AM
  Number of letters in database: 1,619,870
  Number of sequences in database:  4735
  
Lambda     K      H
   0.320    0.133    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 4735
Number of Hits to DB: 955,976
Number of extensions: 42567
Number of successful extensions: 166
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 165
Number of HSP's successfully gapped: 2
Length of query: 295
Length of database: 1,619,870
Length adjustment: 85
Effective length of query: 210
Effective length of database: 1,217,395
Effective search space: 255652950
Effective search space used: 255652950
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 130 (54.7 bits)